RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	DRN1	P53255	507 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	OCA2	P53949	197 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	EFM6	P53970	246 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	BET4	Q00618	327 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	SLT2	Q00772	484 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	YDR541C	Q03049	344 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	WAR1	Q03631	944 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	NOP12	Q08208	459 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	BSC6	Q08280	497 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RDR1	Q08904	546 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	CDC21	P06785	304 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RPS4A	P0CX35	261 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	RPS4B	P0CX36	261 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	KGD1	P20967	1014 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
TOP1	YOL006C	PDE1	P22434	369 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	APL1	P27351	700 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RIM1	P32445	135 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	GSH1	P32477	678 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	YBR144C	P34215	104 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	YKL071W	P36086	256 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
TOP1	YOL006C	SWP82	P43554	623 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	TOS3	P43637	560 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	UBX6	P47049	396 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RFX1	P48743	811 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	ASN2	P49090	572 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	DIA3	P52290	468 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	MSC2	Q03455	724 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	GIM5	Q04493	163 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	ARG7	Q04728	441 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	ARR3	Q06598	404 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RXT3	Q07458	294 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	DIS3	Q08162	1001 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	SMC5	Q08204	1093 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	BRX1	Q08235	291 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	FRE5	Q08908	694 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	BTS1	Q12051	335 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	VAM3	Q12241	283 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	YOR012W	Q12351	137 aa		3.31	□□□□□ -1.88
TOP1	YOL006C	RIB2	Q12362	591 aa	Known RBP	3.31	□□□□□ -1.88
TOP1	YOL006C	APA2	P22108	325 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	DAL2	P25335	343 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	MGR1	P25573	417 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	PMI40	P29952	429 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	HIR2	P32480	875 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	IMP3	P32899	183 aa	Predicted RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	GDH2	P33327	1092 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	not detected
TOP1	YOL006C	SKN7	P38889	622 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YMR147W	P40218	223 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	YIR042C	P40586	236 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YGR079W	P53249	370 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	CAF130	P53280	1122 aa	Predicted RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	NAM8	Q00539	523 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	STD1	Q02794	444 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YMR265C	Q03508	461 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	CTS2	Q06350	511 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	DIA2	Q08496	732 aa	Predicted RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	DSE3	Q08729	430 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	PUS9	Q12069	462 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	RRD2	Q12461	358 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YBR255C-A	Q3E776	120 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	BRR1	Q99177	341 aa	Predicted RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	YLR415C	O13578	112 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	MSF1	P08425	469 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	ERG11	P10614	530 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	PMR1	P13586	950 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	ART10	P18634	518 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	SPE2	P21182	396 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	PTR2	P32901	601 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	NUP133	P36161	1157 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	KAP104	P38217	918 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	DIA4	P38705	446 aa	Predicted RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	PRM9	P39551	298 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	GET2	P40056	285 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	FAR3	P46671	204 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	ROG1	P53118	685 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YNL260C	P53846	198 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YNL146W	P53906	100 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	YMR160W	Q03823	816 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	SIZ1	Q04195	904 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	RTT103	Q05543	409 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	VIK1	Q12045	647 aa		3.3	□□□□□ -1.88
TOP1	YOL006C	HRP1	Q99383	534 aa	Known RBP	3.3	□□□□□ -1.88
TOP1	YOL006C	PUT2	P07275	575 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	SPE1	P08432	466 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	TUB3	P09734	445 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	SPS4	P09937	338 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	RPL31B	P0C2H9	113 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	KIN2	P13186	1147 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	PRP4	P20053	465 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	YCR015C	P25616	317 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	YUR1	P26725	428 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	RAD23	P32628	398 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	ECT1	P33412	323 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	MRPL10	P36520	322 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	PPS1	P38148	807 aa		3.29	□□□□□ -1.88
TOP1	YOL006C	SAP1	P39955	897 aa	Known RBP	3.29	□□□□□ -1.88
TOP1	YOL006C	MPS3	P47069	682 aa		3.29	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms