RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W SFM1Q12314 213 aa6.59□□□□□ -1.35
NMD5YJR132W SNT1P25357 1226 aa6.59□□□□□ -1.36
NMD5YJR132W IDH1P28834 360 aaKnown RBP RIP-Chip data6.59□□□□□ -1.36not detected
NMD5YJR132W YBL055CP34220 418 aaPredicted RBP6.59□□□□□ -1.36
NMD5YJR132W PSD1P39006 500 aa6.59□□□□□ -1.36
NMD5YJR132W ECM10P39987 644 aa6.59□□□□□ -1.36
NMD5YJR132W FKH1P40466 484 aa6.59□□□□□ -1.36
NMD5YJR132W FMP33P46998 180 aa6.59□□□□□ -1.36
NMD5YJR132W ECM22Q05958 814 aaPredicted RBP6.59□□□□□ -1.36
NMD5YJR132W AIM41Q12032 185 aa6.59□□□□□ -1.36
NMD5YJR132W AGC1Q12482 902 aa6.59□□□□□ -1.36
NMD5YJR132W RAD1P06777 1100 aa6.58□□□□□ -1.36
NMD5YJR132W PTC7P38797 343 aa6.58□□□□□ -1.36
NMD5YJR132W SER3P40054 469 aa6.58□□□□□ -1.36
NMD5YJR132W RFC4P40339 323 aaKnown RBP6.58□□□□□ -1.36
NMD5YJR132W DOT5P40553 215 aa6.58□□□□□ -1.36
NMD5YJR132W SMK1P41808 388 aa6.58□□□□□ -1.36
NMD5YJR132W RRT6P53117 311 aaPredicted RBP6.58□□□□□ -1.36
NMD5YJR132W VPS62P53285 467 aa6.58□□□□□ -1.36
NMD5YJR132W VTA1Q06263 330 aa6.58□□□□□ -1.36
NMD5YJR132W LDB18Q07887 179 aa6.58□□□□□ -1.36
NMD5YJR132W RTK1Q12100 620 aaPredicted RBP6.58□□□□□ -1.36
NMD5YJR132W CDC8P00572 216 aa6.58□□□□□ -1.36
NMD5YJR132W PHA2P32452 334 aa6.58□□□□□ -1.36
NMD5YJR132W OAF3P36023 863 aa6.58□□□□□ -1.36
NMD5YJR132W SLI15P38283 698 aa6.58□□□□□ -1.36
NMD5YJR132W FAD1P38913 306 aa6.58□□□□□ -1.36
NMD5YJR132W FET3P38993 636 aa6.58□□□□□ -1.36
NMD5YJR132W IRC5P43610 853 aa6.58□□□□□ -1.36
NMD5YJR132W UFD1P53044 361 aa6.58□□□□□ -1.36
NMD5YJR132W IMP4P53941 290 aaKnown RBP6.58□□□□□ -1.36
NMD5YJR132W RIM13Q03792 727 aa6.58□□□□□ -1.36
NMD5YJR132W FMP45Q07651 309 aa6.58□□□□□ -1.36
NMD5YJR132W FRE3Q08905 711 aa6.58□□□□□ -1.36
NMD5YJR132W SWT1Q12104 458 aa6.58□□□□□ -1.36
NMD5YJR132W TOP3P13099 656 aa6.57□□□□□ -1.36
NMD5YJR132W AIM17P23180 465 aaKnown RBP6.57□□□□□ -1.36
NMD5YJR132W SPR1P32603 445 aa6.57□□□□□ -1.36
NMD5YJR132W GEX2P36173 615 aa6.57□□□□□ -1.36
NMD5YJR132W AGP2P38090 596 aa6.57□□□□□ -1.36
NMD5YJR132W YGR201CP42936 225 aa6.57□□□□□ -1.36
NMD5YJR132W YFR018CP43599 363 aa6.57□□□□□ -1.36
NMD5YJR132W YJR096WP47137 282 aa6.57□□□□□ -1.36
NMD5YJR132W DIA3P52290 468 aa6.57□□□□□ -1.36
NMD5YJR132W MET13P53128 600 aa6.57□□□□□ -1.36
NMD5YJR132W GPI1P53306 609 aa6.57□□□□□ -1.36
NMD5YJR132W YDR249CQ03787 373 aa6.57□□□□□ -1.36
NMD5YJR132W GIS1Q03833 894 aa6.57□□□□□ -1.36
NMD5YJR132W OPT2Q06593 877 aa6.57□□□□□ -1.36
NMD5YJR132W UBX3Q12229 455 aa6.57□□□□□ -1.36
NMD5YJR132W ZRT2Q12436 422 aa6.57□□□□□ -1.36
NMD5YJR132W HXT2P23585 541 aa6.57□□□□□ -1.36
NMD5YJR132W RPS1AP33442 255 aaKnown RBP6.57□□□□□ -1.36
NMD5YJR132W ICS2P38284 255 aa6.57□□□□□ -1.36
NMD5YJR132W BIT2P38346 545 aa6.57□□□□□ -1.36
NMD5YJR132W YHL008CP38750 627 aa6.57□□□□□ -1.36
NMD5YJR132W COG1P53079 417 aa6.57□□□□□ -1.36
NMD5YJR132W NOG1Q02892 647 aaKnown RBP6.57□□□□□ -1.36
NMD5YJR132W NEJ1Q06148 342 aa6.57□□□□□ -1.36
NMD5YJR132W GSH2Q08220 491 aa6.57□□□□□ -1.36
NMD5YJR132W TRK1P12685 1235 aa6.56□□□□□ -1.36
NMD5YJR132W YCP4P25349 247 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W AGP1P25376 633 aa6.56□□□□□ -1.36
NMD5YJR132W AKR1P39010 764 aa6.56□□□□□ -1.36
NMD5YJR132W CCT2P39076 527 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W PCF11P39081 626 aaPredicted RBP6.56□□□□□ -1.36
NMD5YJR132W PRM10P42946 383 aa6.56□□□□□ -1.36
NMD5YJR132W DID2P69771 204 aa6.56□□□□□ -1.36
NMD5YJR132W YMR279CQ03263 540 aa6.56□□□□□ -1.36
NMD5YJR132W OST6Q03723 332 aa6.56□□□□□ -1.36
NMD5YJR132W AIM33Q04516 312 aa6.56□□□□□ -1.36
NMD5YJR132W YOL075CQ08234 1294 aa6.56□□□□□ -1.36
NMD5YJR132W YLR053CQ12026 108 aa6.56□□□□□ -1.36
NMD5YJR132W OCA6Q12454 224 aa6.56□□□□□ -1.36
NMD5YJR132W HCM1P25364 564 aa6.56□□□□□ -1.36
NMD5YJR132W PRP21P32524 280 aaPredicted RBP6.56□□□□□ -1.36
NMD5YJR132W KAP122P32767 1081 aa6.56□□□□□ -1.36
NMD5YJR132W TGL1P34163 548 aa6.56□□□□□ -1.36
NMD5YJR132W AST1P35183 429 aa6.56□□□□□ -1.36
NMD5YJR132W HSL7P38274 827 aa6.56□□□□□ -1.36
NMD5YJR132W TIF11P38912 153 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W VRG4P40107 337 aa6.56□□□□□ -1.36
NMD5YJR132W CSM2P40465 213 aa6.56□□□□□ -1.36
NMD5YJR132W OYE3P41816 400 aaPredicted RBP6.56□□□□□ -1.36
NMD5YJR132W YJL163CP46996 555 aa6.56□□□□□ -1.36
NMD5YJR132W YGL185CP53100 379 aa6.56□□□□□ -1.36
NMD5YJR132W EFR3Q03653 782 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W PUN1Q06991 263 aa6.56□□□□□ -1.36
NMD5YJR132W TRE1Q08919 783 aa6.56□□□□□ -1.36
NMD5YJR132W PET20Q99373 253 aa6.56□□□□□ -1.36
NMD5YJR132W ROM2P51862 1356 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W REV1P12689 985 aa6.56□□□□□ -1.36
NMD5YJR132W PDC6P26263 563 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W FAA1P30624 700 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W PRE4P30657 266 aa6.56□□□□□ -1.36
NMD5YJR132W SPS19P32573 292 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W HBS1P32769 611 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W RFS1P38234 210 aaKnown RBP6.56□□□□□ -1.36
NMD5YJR132W SHR5P41912 237 aa6.56□□□□□ -1.36
NMD5YJR132W YGL036WP53185 909 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms