RNA–Protein interactions for RNA: YGR167W

CLC1, Transcript of Clathrin light chain, yeast

Gene CLC1, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLC1	YGR167W	MSR1	P38714	643 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	YHR210C	P38893	341 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	SEC28	P40509	296 aa	Known RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	DOT5	P40553	215 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	DIM1	P41819	318 aa	Known RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	YGL082W	P53155	381 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	JJJ1	P53863	590 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	TOF2	Q02208	771 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	ERB1	Q04660	807 aa	Known RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	YOR365C	Q08844	703 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	PGC1	Q08959	321 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	SMF3	Q12078	473 aa	Predicted RBP	4.24	□□□□□ -1.73
CLC1	YGR167W	TIP41	Q12199	356 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
CLC1	YGR167W	RAD52	P06778	471 aa	Known RBP	4.23	□□□□□ -1.73
CLC1	YGR167W	REC107	P21651	314 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	POP2	P39008	433 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	LCB2	P40970	561 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	ZIM17	P42844	174 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	IKS1	P47042	667 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	PEX25	Q02969	394 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	GYL1	Q04322	720 aa		4.23	□□□□□ -1.73
CLC1	YGR167W	MRS3	P10566	314 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	APE1	P14904	514 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	CLB1	P24868	471 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YCR051W	P25631	222 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	BRF1	P29056	596 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	WBP1	P33767	430 aa	Known RBP	4.22	□□□□□ -1.73
CLC1	YGR167W	SHP1	P34223	423 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YNK1	P36010	153 aa	Known RBP	4.22	□□□□□ -1.73
CLC1	YGR167W	YTA12	P40341	825 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YJL055W	P47044	245 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	AIM22	P47051	409 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YJR154W	P47181	346 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	ALT2	P52892	507 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	THP1	Q08231	455 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YRF1-4	O13559	1382 aa		4.22	□□□□□ -1.73
CLC1	YGR167W	YML002W	P0CF17	737 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	PRD1	P25375	712 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	YME1	P32795	747 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	FMP46	P36141	133 aa	Known RBP	4.21	□□□□□ -1.74
CLC1	YGR167W	CST26	P38226	397 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	OSH3	P38713	996 aa	Known RBP	4.21	□□□□□ -1.74
CLC1	YGR167W	OTU2	P38747	307 aa	Known RBP	4.21	□□□□□ -1.74
CLC1	YGR167W	PES4	P39684	611 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	VPS52	P39904	641 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	CSM2	P40465	213 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	ALK1	P43633	760 aa	Known RBP	4.21	□□□□□ -1.74
CLC1	YGR167W	PET130	P47065	347 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	GPI8	P49018	411 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	CRZ1	P53968	678 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	OAZ1	Q02803	292 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	YDR239C	Q03780	787 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	FIN1	Q03898	291 aa		4.21	□□□□□ -1.74
CLC1	YGR167W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CLC1	YGR167W	PAP1	P29468	568 aa	Known RBP	4.2	□□□□□ -1.74
CLC1	YGR167W	SIP2	P34164	415 aa	Known RBP	4.2	□□□□□ -1.74
CLC1	YGR167W	TCM62	P38228	572 aa	Known RBP	4.2	□□□□□ -1.74
CLC1	YGR167W	TIF4631	P39935	952 aa	Known RBP	4.2	□□□□□ -1.74
CLC1	YGR167W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CLC1	YGR167W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CLC1	YGR167W	BNI5	P53890	448 aa	Known RBP	4.2	□□□□□ -1.74
CLC1	YGR167W	ATG29	Q12092	213 aa		4.2	□□□□□ -1.74
CLC1	YGR167W	YMR230W-A	Q3E7B5	62 aa		4.2	□□□□□ -1.74
CLC1	YGR167W	SUC2	P00724	532 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	STF1	P01098	86 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	PRP2	P20095	876 aa	Predicted RBP	4.19	□□□□□ -1.74
CLC1	YGR167W	MRE11	P32829	692 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	MSN2	P33748	704 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	DUG2	P38149	878 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	BNA4	P38169	460 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	RPM2	Q02773	1202 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	RLI1	Q03195	608 aa	Known RBP	4.19	□□□□□ -1.74
CLC1	YGR167W	SLD5	Q03406	294 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	YDR341C	Q05506	607 aa	Known RBP	4.19	□□□□□ -1.74
CLC1	YGR167W	AFI1	Q99222	893 aa		4.19	□□□□□ -1.74
CLC1	YGR167W	TRX1	P22217	103 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	RRP7	P25368	297 aa	Predicted RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	URA7	P28274	579 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	ATS1	P31386	333 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	PUP2	P32379	260 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	TFB1	P32776	642 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	FRE1	P32791	686 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	TWF1	P53250	332 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	CAF130	P53280	1122 aa	Predicted RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	ZPR1	P53303	486 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	HEF3	P53978	1044 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	ROY1	Q04847	553 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	IVY1	Q04934	453 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	RQC1	Q05468	723 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	BNA5	Q05979	453 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	MRD1	Q06106	887 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	SYO1	Q07395	620 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	CUE5	Q08412	411 aa	Known RBP	4.18	□□□□□ -1.74
CLC1	YGR167W	NFI1	Q12216	726 aa		4.18	□□□□□ -1.74
CLC1	YGR167W	COR1	P07256	457 aa		4.17	□□□□□ -1.74
CLC1	YGR167W	AMD1	P15274	810 aa	Known RBP	4.17	□□□□□ -1.74
CLC1	YGR167W	VMA2	P16140	517 aa	Known RBP	4.17	□□□□□ -1.74
CLC1	YGR167W	CPR2	P23285	205 aa		4.17	□□□□□ -1.74
CLC1	YGR167W	NDC1	P32500	655 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms