RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	HEM15	P16622	393 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	SUI2	P20459	304 aa	Known RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	POL4	P25615	582 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	MRP4	P32902	394 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	RIP-Chip
NNF2	YGR089W	SHP1	P34223	423 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	DUG2	P38149	878 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	TCM62	P38228	572 aa	Known RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	TPM2	P40414	161 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	GCD10	P41814	478 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	YJR008W	P47085	338 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	AVT4	P50944	713 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	ART5	P53244	586 aa	Known RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	GPI1	P53306	609 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	BSC5	P53755	489 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	YLR152C	P54072	576 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	YML131W	Q03102	365 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	PIR3	Q03180	325 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	ATG16	Q03818	150 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	BUD22	Q04347	519 aa	Known RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	YKU80	Q04437	629 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	RBS1	Q05672	457 aa	Known RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	THP1	Q08231	455 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	RRG7	Q08774	242 aa	Predicted RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	KEL3	Q08979	651 aa	Predicted RBP	0.62	□□□□□ -2.31
NNF2	YGR089W	RBD2	Q12270	262 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	SKM1	Q12469	655 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	POM152	P39685	1337 aa		0.62	□□□□□ -2.31
NNF2	YGR089W	ADH2	P00331	348 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	HHF1	P02309	103 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	ART10	P18634	518 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	EXO70	P19658	623 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	YCK1	P23291	538 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	PRE8	P23639	250 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	HCS1	P34243	683 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	BNA4	P38169	460 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	KEL1	P38853	1164 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	REE1	P40893	198 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	ELP2	P42935	788 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	RRT5	P43607	289 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	SSP2	Q08646	371 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	FMP40	Q08968	688 aa	Predicted RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	THP3	Q12049	470 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	MES1	P00958	751 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	GLK1	P17709	500 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	CPR4	P25334	318 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	CDC60	P26637	1090 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	ARO2	P28777	376 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	CHS3	P29465	1165 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	AFG3	P39925	761 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	LYS14	P40971	790 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	ALK1	P43633	760 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	IMD4	P50094	524 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	ZPR1	P53303	486 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	CAF40	P53829	373 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	IPI3	P53877	555 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	HEF3	P53978	1044 aa	Known RBP	0.61	□□□□□ -2.31
NNF2	YGR089W	TOF2	Q02208	771 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	NGL3	Q03210	505 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	RRN11	Q04712	507 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	ESA1	Q08649	445 aa		0.61	□□□□□ -2.31
NNF2	YGR089W	EST1	P17214	699 aa	Predicted RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	PRP2	P20095	876 aa	Predicted RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	BUB3	P26449	341 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	NDI1	P32340	513 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	ATP11	P32453	318 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	GLC7	P32598	312 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	FRE2	P36033	711 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	VPS24	P36095	224 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	NAT2	P37293	288 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	FUI1	P38196	639 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	ALG5	P40350	334 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	YFL067W	P43537	175 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	DUO1	P53168	247 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	MEP3	P53390	489 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	TOF1	P53840	1238 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	TSR1	Q07381	788 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	YBR126W-A	Q8TGU7	68 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	SUP35	P05453	685 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	COR1	P07256	457 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	CDC16	P09798	840 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MFT1	P33441	392 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	SEF1	P34228	1148 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	YBL029W	P38201	376 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MSR1	P38714	643 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
NNF2	YGR089W	POP6	P53218	158 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MFB1	Q04922	465 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	YEH1	Q07804	573 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	RLM1	Q12224	676 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	YDL012C	Q12489	107 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	NOP58	Q12499	511 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	YPT6	Q99260	215 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	PWP2	P25635	923 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	PAP1	P29468	568 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	TCD2	P36101	447 aa	Known RBP	0.6	□□□□□ -2.31
NNF2	YGR089W	PIM1	P36775	1133 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MIX23	P38162	196 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MUM2	P38236	366 aa		0.6	□□□□□ -2.31
NNF2	YGR089W	MBB1	P39534	108 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms