RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W YJL213WP40896 331 aa3.58□□□□□ -1.84
RPN9YDR427W RMD8P43620 662 aa3.58□□□□□ -1.84
RPN9YDR427W GPI1P53306 609 aa3.58□□□□□ -1.84
RPN9YDR427W JJJ1P53863 590 aa3.58□□□□□ -1.84
RPN9YDR427W RPT6Q01939 405 aaKnown RBP3.58□□□□□ -1.84
RPN9YDR427W IRC15Q02733 499 aa3.58□□□□□ -1.84
RPN9YDR427W TAP42Q04372 366 aa3.58□□□□□ -1.84
RPN9YDR427W MRD1Q06106 887 aaKnown RBP3.58□□□□□ -1.84
RPN9YDR427W VPS74Q06385 345 aa3.58□□□□□ -1.84
RPN9YDR427W BRR1Q99177 341 aaPredicted RBP3.58□□□□□ -1.84
RPN9YDR427W CYB2P00175 591 aa3.57□□□□□ -1.84
RPN9YDR427W RPL31BP0C2H9 113 aaKnown RBP3.57□□□□□ -1.84
RPN9YDR427W RPL20AP0CX23 172 aaKnown RBP3.57□□□□□ -1.84
RPN9YDR427W RPL20BP0CX24 172 aaPredicted RBP3.57□□□□□ -1.84
RPN9YDR427W MRP7P12687 371 aa3.57□□□□□ -1.84
RPN9YDR427W ATR1P13090 542 aa3.57□□□□□ -1.84
RPN9YDR427W SEC66P33754 206 aa3.57□□□□□ -1.84
RPN9YDR427W PMU1P36069 295 aa3.57□□□□□ -1.84
RPN9YDR427W CST26P38226 397 aa3.57□□□□□ -1.84
RPN9YDR427W ERP2P39704 215 aa3.57□□□□□ -1.84
RPN9YDR427W IRC6P43615 237 aa3.57□□□□□ -1.84
RPN9YDR427W TWF1P53250 332 aa3.57□□□□□ -1.84
RPN9YDR427W YDR239CQ03780 787 aa3.57□□□□□ -1.84
RPN9YDR427W HEM2P05373 342 aa3.56□□□□□ -1.84
RPN9YDR427W EXO70P19658 623 aa3.56□□□□□ -1.84
RPN9YDR427W CPR3P25719 182 aa3.56□□□□□ -1.84
RPN9YDR427W AGA1P32323 725 aa3.56□□□□□ -1.84
RPN9YDR427W MFT1P33441 392 aaKnown RBP3.56□□□□□ -1.84
RPN9YDR427W VID24P38263 362 aa3.56□□□□□ -1.84
RPN9YDR427W TIF5P38431 405 aaKnown RBP3.56□□□□□ -1.84
RPN9YDR427W UTP9P38882 575 aaKnown RBP3.56□□□□□ -1.84
RPN9YDR427W YHR218WP38899 603 aa3.56□□□□□ -1.84
RPN9YDR427W SHO1P40073 367 aa3.56□□□□□ -1.84
RPN9YDR427W ALG8P40351 577 aa3.56□□□□□ -1.84
RPN9YDR427W DOT5P40553 215 aa3.56□□□□□ -1.84
RPN9YDR427W CAF130P53280 1122 aaPredicted RBP3.56□□□□□ -1.84
RPN9YDR427W RKM5Q12367 367 aa3.56□□□□□ -1.84
RPN9YDR427W GRX6Q12438 231 aa3.56□□□□□ -1.84
RPN9YDR427W RRD2Q12461 358 aa3.56□□□□□ -1.84
RPN9YDR427W RNA14P25298 677 aaKnown RBP3.55□□□□□ -1.84
RPN9YDR427W CMC1P36064 111 aa3.55□□□□□ -1.84
RPN9YDR427W SLX1P38324 304 aa3.55□□□□□ -1.84
RPN9YDR427W ARF3P40994 183 aaRIP-Chip data3.55□□□□□ -1.84not detected
RPN9YDR427W IDP2P41939 412 aa3.55□□□□□ -1.84
RPN9YDR427W BOR1P53838 576 aa3.55□□□□□ -1.84
RPN9YDR427W VPS72Q03388 795 aa3.55□□□□□ -1.84
RPN9YDR427W PDS5Q04264 1277 aa3.55□□□□□ -1.84
RPN9YDR427W TLG2Q08144 397 aa3.55□□□□□ -1.84
RPN9YDR427W ATG29Q12092 213 aa3.55□□□□□ -1.84
RPN9YDR427W CTF3Q12748 733 aa3.55□□□□□ -1.84
RPN9YDR427W RTP1Q12751 981 aa3.55□□□□□ -1.84
RPN9YDR427W RAV1P47104 1357 aa3.54□□□□□ -1.84
RPN9YDR427W MES1P00958 751 aaKnown RBP3.54□□□□□ -1.84
RPN9YDR427W CKA1P15790 372 aa3.54□□□□□ -1.84
RPN9YDR427W PUT3P25502 979 aaPredicted RBP3.54□□□□□ -1.84
RPN9YDR427W BUB3P26449 341 aa3.54□□□□□ -1.84
RPN9YDR427W PMT1P33775 817 aa3.54□□□□□ -1.84
RPN9YDR427W FAU1P40099 211 aa3.54□□□□□ -1.84
RPN9YDR427W GWT1P47026 490 aa3.54□□□□□ -1.84
RPN9YDR427W URB2P47108 1174 aa3.54□□□□□ -1.84
RPN9YDR427W ARK1P53974 638 aa3.54□□□□□ -1.84
RPN9YDR427W RQC1Q05468 723 aaKnown RBP3.54□□□□□ -1.84
RPN9YDR427W RSA1Q08932 381 aa3.54□□□□□ -1.84
RPN9YDR427W PMR1P13586 950 aa3.53□□□□□ -1.84
RPN9YDR427W GPI10P30777 616 aa3.53□□□□□ -1.84
RPN9YDR427W TUL1P36096 758 aa3.53□□□□□ -1.84
RPN9YDR427W NDE1P40215 560 aa3.53□□□□□ -1.84
RPN9YDR427W SYG1P40528 902 aa3.53□□□□□ -1.84
RPN9YDR427W VMA13P41807 478 aaKnown RBP3.53□□□□□ -1.84
RPN9YDR427W YJL132WP47014 750 aa3.53□□□□□ -1.84
RPN9YDR427W YGL108CP53139 140 aa3.53□□□□□ -1.84
RPN9YDR427W COG4Q06096 861 aa3.53□□□□□ -1.84
RPN9YDR427W MET17P06106 444 aa3.52□□□□□ -1.85
RPN9YDR427W LPD1P09624 499 aaKnown RBP3.52□□□□□ -1.85
RPN9YDR427W ROX1P25042 368 aa3.52□□□□□ -1.85
RPN9YDR427W FUN19P28003 413 aaPredicted RBP3.52□□□□□ -1.85
RPN9YDR427W SMF1P38925 575 aa3.52□□□□□ -1.85
RPN9YDR427W HXT14P42833 540 aa3.52□□□□□ -1.85
RPN9YDR427W TSR2Q06672 205 aaKnown RBP3.52□□□□□ -1.85
RPN9YDR427W RIM20Q12033 661 aa3.52□□□□□ -1.85
RPN9YDR427W PCA1P38360 1216 aa3.51□□□□□ -1.85
RPN9YDR427W GCD10P41814 478 aa3.51□□□□□ -1.85
RPN9YDR427W ELP2P42935 788 aa3.51□□□□□ -1.85
RPN9YDR427W OCA1P50946 238 aaPredicted RBP3.51□□□□□ -1.85
RPN9YDR427W MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
RPN9YDR427W MRPL19P53875 158 aa3.51□□□□□ -1.85
RPN9YDR427W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RPN9YDR427W HNT3Q08702 217 aa3.51□□□□□ -1.85
RPN9YDR427W YLL056CQ12177 298 aa3.51□□□□□ -1.85
RPN9YDR427W YCL021W-AQ96VH3 125 aa3.51□□□□□ -1.85
RPN9YDR427W CDC31P06704 161 aaKnown RBP3.5□□□□□ -1.85
RPN9YDR427W RHO2P06781 192 aa3.5□□□□□ -1.85
RPN9YDR427W CBS2P14905 389 aa3.5□□□□□ -1.85
RPN9YDR427W ATP10P18496 279 aa3.5□□□□□ -1.85
RPN9YDR427W RAD14P28519 371 aa3.5□□□□□ -1.85
RPN9YDR427W RPN12P32496 274 aa3.5□□□□□ -1.85
RPN9YDR427W GYP6P32806 458 aa3.5□□□□□ -1.85
RPN9YDR427W AVT5P38176 459 aa3.5□□□□□ -1.85
RPN9YDR427W POP1P41812 875 aa3.5□□□□□ -1.85
RPN9YDR427W OGG1P53397 376 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms