RNA–Protein interactions for RNA: tF(GAA)D

tF(GAA)D, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)D, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)DtF(GAA)D YJL181WP46987 611 aa4.51□□□□□ -1.69
tF(GAA)DtF(GAA)D LYS4P49367 693 aaPredicted RBP4.51□□□□□ -1.69
tF(GAA)DtF(GAA)D PRP5P21372 849 aaPredicted RBP4.5□□□□□ -1.69
tF(GAA)DtF(GAA)D RCM1P53972 490 aa4.5□□□□□ -1.69
tF(GAA)DtF(GAA)D DOT5P40553 215 aa4.49□□□□□ -1.69
tF(GAA)DtF(GAA)D SSA2P10592 639 aaKnown RBP4.48□□□□□ -1.69
tF(GAA)DtF(GAA)D NAP1P25293 417 aaKnown RBP4.48□□□□□ -1.69
tF(GAA)DtF(GAA)D IES2P40154 320 aa4.48□□□□□ -1.69
tF(GAA)DtF(GAA)D TAF8Q03750 510 aa4.48□□□□□ -1.69
tF(GAA)DtF(GAA)D GCN2P15442 1659 aa4.48□□□□□ -1.69
tF(GAA)DtF(GAA)D IKI3Q06706 1349 aaKnown RBP4.47□□□□□ -1.69
tF(GAA)DtF(GAA)D NPR2P39923 615 aa4.47□□□□□ -1.69
tF(GAA)DtF(GAA)D ALD2P47771 506 aa4.47□□□□□ -1.69
tF(GAA)DtF(GAA)D MSB3P48566 633 aaPredicted RBP4.47□□□□□ -1.69
tF(GAA)DtF(GAA)D BFR2Q06631 534 aaKnown RBP4.47□□□□□ -1.69
tF(GAA)DtF(GAA)D RAV1P47104 1357 aa4.46□□□□□ -1.7
tF(GAA)DtF(GAA)D CPS1P27614 576 aa4.46□□□□□ -1.7
tF(GAA)DtF(GAA)D FOX2Q02207 900 aaKnown RBP4.46□□□□□ -1.7
tF(GAA)DtF(GAA)D PSK1P31374 1356 aa4.45□□□□□ -1.7
tF(GAA)DtF(GAA)D PPH3P32345 308 aa4.45□□□□□ -1.7
tF(GAA)DtF(GAA)D PRP40P33203 583 aaKnown RBP4.45□□□□□ -1.7
tF(GAA)DtF(GAA)D NOP7P53261 605 aaKnown RBP4.45□□□□□ -1.7
tF(GAA)DtF(GAA)D LAM6Q08001 693 aa4.45□□□□□ -1.7
tF(GAA)DtF(GAA)D ENP1P38333 483 aaKnown RBP4.44□□□□□ -1.7
tF(GAA)DtF(GAA)D TCB1Q12466 1186 aa4.44□□□□□ -1.7
tF(GAA)DtF(GAA)D RTC1Q08281 1341 aa4.44□□□□□ -1.7
tF(GAA)DtF(GAA)D COBP00163 385 aa4.43□□□□□ -1.7
tF(GAA)DtF(GAA)D NUP192P47054 1683 aa4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D YKL133CP36066 463 aa4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D RPG1P38249 964 aaKnown RBP4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D GTT3P39996 337 aa4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D CTH1P47976 325 aa4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D RRP5Q05022 1729 aaKnown RBP4.42□□□□□ -1.7
tF(GAA)DtF(GAA)D CSE4P36012 229 aa4.41□□□□□ -1.7
tF(GAA)DtF(GAA)D YRF1-2P40105 1681 aa4.41□□□□□ -1.7
tF(GAA)DtF(GAA)D YRF1-4O13559 1382 aa4.4□□□□□ -1.71
tF(GAA)DtF(GAA)D ROM2P51862 1356 aaKnown RBP4.4□□□□□ -1.71
tF(GAA)DtF(GAA)D RPS24AP0CX31 135 aaKnown RBP4.39□□□□□ -1.71
tF(GAA)DtF(GAA)D RPS24BP0CX32 135 aaKnown RBP4.39□□□□□ -1.71
tF(GAA)DtF(GAA)D XKS1P42826 600 aa4.39□□□□□ -1.71
tF(GAA)DtF(GAA)D SLM3Q12093 417 aa4.39□□□□□ -1.71
tF(GAA)DtF(GAA)D YEF3P16521 1044 aaKnown RBP4.38□□□□□ -1.71
tF(GAA)DtF(GAA)D ESL2P36168 1195 aa4.38□□□□□ -1.71
tF(GAA)DtF(GAA)D EAF6P47128 113 aa4.38□□□□□ -1.71
tF(GAA)DtF(GAA)D RSF2P46974 1380 aa4.38□□□□□ -1.71
tF(GAA)DtF(GAA)D YKR075CP36155 307 aa4.37□□□□□ -1.71
tF(GAA)DtF(GAA)D ORC1P54784 914 aaPredicted RBP4.37□□□□□ -1.71
tF(GAA)DtF(GAA)D ALD3P54114 506 aa4.36□□□□□ -1.71
tF(GAA)DtF(GAA)D FRK1Q03002 865 aaPredicted RBP4.36□□□□□ -1.71
tF(GAA)DtF(GAA)D SQS1P53866 767 aaKnown RBP4.35□□□□□ -1.71
tF(GAA)DtF(GAA)D URB1P34241 1764 aaKnown RBP4.35□□□□□ -1.71
tF(GAA)DtF(GAA)D LEU2P04173 364 aaPredicted RBP4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D SPE2P21182 396 aa4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D KIP3P53086 805 aaKnown RBP4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D HPC2Q01448 625 aa4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D EDE1P34216 1381 aa4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D ADE6P38972 1358 aaKnown RBP4.34□□□□□ -1.71
tF(GAA)DtF(GAA)D BDF1P35817 686 aa4.33□□□□□ -1.72
tF(GAA)DtF(GAA)D CHZ1P40019 153 aaPredicted RBP4.33□□□□□ -1.72
tF(GAA)DtF(GAA)D SAP155P43612 1002 aa4.33□□□□□ -1.72
tF(GAA)DtF(GAA)D MSN5P52918 1224 aa4.33□□□□□ -1.72
tF(GAA)DtF(GAA)D GAS4Q08271 471 aa4.33□□□□□ -1.72
tF(GAA)DtF(GAA)D SPT7P35177 1332 aa4.32□□□□□ -1.72
tF(GAA)DtF(GAA)D MTR4P47047 1073 aaKnown RBP4.32□□□□□ -1.72
tF(GAA)DtF(GAA)D MSB4Q12317 492 aa4.32□□□□□ -1.72
tF(GAA)DtF(GAA)D TY4B-HP0C2J7 1802 aa4.32□□□□□ -1.72
tF(GAA)DtF(GAA)D TY4B-JP47024 1803 aa4.32□□□□□ -1.72
tF(GAA)DtF(GAA)D DPS1P04802 557 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)DtF(GAA)D YER156CP40093 338 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)DtF(GAA)D ADE16P54113 591 aaKnown RBP4.31□□□□□ -1.72
tF(GAA)DtF(GAA)D BUG1Q12191 341 aa4.31□□□□□ -1.72
tF(GAA)DtF(GAA)D SSA4P22202 642 aaKnown RBP4.3□□□□□ -1.72
tF(GAA)DtF(GAA)D MEC3Q02574 474 aa4.3□□□□□ -1.72
tF(GAA)DtF(GAA)D ATG13Q06628 738 aa4.3□□□□□ -1.72
tF(GAA)DtF(GAA)D RCR1P38212 213 aa4.29□□□□□ -1.72
tF(GAA)DtF(GAA)D CWH41P53008 833 aa4.29□□□□□ -1.72
tF(GAA)DtF(GAA)D FKS3Q04952 1785 aa4.29□□□□□ -1.72
tF(GAA)DtF(GAA)D TOP1P04786 769 aa4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D PEX21P50091 288 aa4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D PRP43P53131 767 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D RIX7Q07844 837 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D CTI6Q08923 506 aa4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D GRE2Q12068 342 aaKnown RBP4.28□□□□□ -1.72
tF(GAA)DtF(GAA)D CTT1P06115 562 aa4.27□□□□□ -1.73
tF(GAA)DtF(GAA)D SLI15P38283 698 aa4.27□□□□□ -1.73
tF(GAA)DtF(GAA)D RRT14P40470 206 aa4.27□□□□□ -1.73
tF(GAA)DtF(GAA)D TOS1P38288 455 aa4.26□□□□□ -1.73
tF(GAA)DtF(GAA)D KIN4Q01919 800 aa4.26□□□□□ -1.73
tF(GAA)DtF(GAA)D RPO41P13433 1351 aaKnown RBP4.26□□□□□ -1.73
tF(GAA)DtF(GAA)D YLR419WQ06698 1435 aaKnown RBP4.24□□□□□ -1.73
tF(GAA)DtF(GAA)D YKL222CP35995 705 aa4.24□□□□□ -1.73
tF(GAA)DtF(GAA)D RTF1P53064 558 aa4.24□□□□□ -1.73
tF(GAA)DtF(GAA)D UTP22P53254 1237 aaPredicted RBP4.24□□□□□ -1.73
tF(GAA)DtF(GAA)D PUS5Q06244 254 aa4.24□□□□□ -1.73
tF(GAA)DtF(GAA)D THS1P04801 734 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)DtF(GAA)D RAD4P14736 754 aa4.23□□□□□ -1.73
tF(GAA)DtF(GAA)D OSM1P21375 501 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)DtF(GAA)D GRX1P25373 110 aaKnown RBP4.23□□□□□ -1.73
tF(GAA)DtF(GAA)D BUD27P43573 796 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
tF(GAA)DtF(GAA)D YBP2P53169 641 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms