RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 TY1A-MR2P0CX69 440 aa2.85□□□□□ -1.95
snR50snR50 SEC2P17065 759 aa2.85□□□□□ -1.95
snR50snR50 RAM2P29703 316 aa2.85□□□□□ -1.95
snR50snR50 TY1A-JR2P47099 440 aa2.85□□□□□ -1.95
snR50snR50 YJR115WP47152 169 aa2.85□□□□□ -1.95
snR50snR50 TY1A-DR1Q03856 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-ML1Q04706 440 aaKnown RBP2.85□□□□□ -1.95
snR50snR50 TY1A-BRQ12217 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-NL2Q12470 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-GR2Q12485 440 aa2.85□□□□□ -1.95
snR50snR50 YIR007WP40566 764 aa2.83□□□□□ -1.96
snR50snR50 MDJ1P35191 511 aa2.81□□□□□ -1.96
snR50snR50 CCT8P47079 568 aaKnown RBP2.81□□□□□ -1.96
snR50snR50 PHM7Q12252 991 aa2.81□□□□□ -1.96
snR50snR50 OPT2Q06593 877 aa2.8□□□□□ -1.96
snR50snR50 YPR204WQ08995 1032 aa2.8□□□□□ -1.96
snR50snR50 SPT16P32558 1035 aaKnown RBP2.79□□□□□ -1.96
snR50snR50 HST3P53687 447 aa2.79□□□□□ -1.96
snR50snR50 NOP53Q12080 455 aaKnown RBP2.78□□□□□ -1.96
snR50snR50 YRR1Q12172 810 aa2.78□□□□□ -1.96
snR50snR50 NUD1P32336 851 aa2.76□□□□□ -1.97
snR50snR50 GLY1P37303 387 aaKnown RBP2.74□□□□□ -1.97
snR50snR50 YLR326WQ06170 240 aaKnown RBP2.74□□□□□ -1.97
snR50snR50 MOD5P07884 428 aa2.73□□□□□ -1.97
snR50snR50 GAP1P19145 602 aaPredicted RBP2.73□□□□□ -1.97
snR50snR50 GCD11P32481 527 aaKnown RBP2.73□□□□□ -1.97
snR50snR50 PCS60P38137 543 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
snR50snR50 UBP14P38237 781 aaKnown RBP2.73□□□□□ -1.97
snR50snR50 RRN7P40992 514 aa2.73□□□□□ -1.97
snR50snR50 YFL066CP43538 392 aa2.72□□□□□ -1.97
snR50snR50 TY1A-BLQ12266 440 aa2.72□□□□□ -1.97
snR50snR50 MSB3P48566 633 aaPredicted RBP2.7□□□□□ -1.98
snR50snR50 DPH6Q12429 685 aa2.7□□□□□ -1.98
snR50snR50 PUS5Q06244 254 aa2.68□□□□□ -1.98
snR50snR50 PTK2P47116 818 aaKnown RBP2.67□□□□□ -1.98
snR50snR50 SCW11P53189 542 aa2.67□□□□□ -1.98
snR50snR50 NSG2P53898 299 aa2.67□□□□□ -1.98
snR50snR50 YLR346CQ06139 101 aa2.67□□□□□ -1.98
snR50snR50 CCP1P00431 361 aa2.65□□□□□ -1.99
snR50snR50 SBP1P10080 294 aaKnown RBP2.65□□□□□ -1.99
snR50snR50 NPL4P33755 580 aa2.65□□□□□ -1.99
snR50snR50 TUM1Q08686 304 aaKnown RBP2.65□□□□□ -1.99
snR50snR50 TFB4Q12004 338 aa2.65□□□□□ -1.99
snR50snR50 RPP1BP10622 106 aaKnown RBP2.64□□□□□ -1.99
snR50snR50 JJJ3P47138 172 aa2.63□□□□□ -1.99
snR50snR50 GLT1Q12680 2145 aaKnown RBP2.63□□□□□ -1.99
snR50snR50 PAT1P25644 796 aaKnown RBP2.62□□□□□ -1.99
snR50snR50 RAD54P32863 898 aa2.62□□□□□ -1.99
snR50snR50 PAC1P39946 494 aaKnown RBP2.62□□□□□ -1.99
snR50snR50 NUP85P46673 744 aa2.62□□□□□ -1.99
snR50snR50 PEX21P50091 288 aa2.62□□□□□ -1.99
snR50snR50 MIP1P15801 1254 aa2.61□□□□□ -1.99
snR50snR50 SKN7P38889 622 aa2.61□□□□□ -1.99
snR50snR50 VHR2P40041 505 aa2.61□□□□□ -1.99
snR50snR50 CSC1Q06538 782 aa2.6□□□□□ -1.99
snR50snR50 THI72Q08579 599 aa2.6□□□□□ -1.99
snR50snR50 ROG3P43602 733 aa2.59□□□□□ -1.99
snR50snR50 LYS5P50113 272 aa2.59□□□□□ -1.99
snR50snR50 TY1A-MR1Q04215 440 aa2.59□□□□□ -1.99
snR50snR50 ERF2Q06551 359 aa2.59□□□□□ -1.99
snR50snR50 YDR090CQ03193 310 aa2.57□□□□□ -2
snR50snR50 YPR053CQ6Q5F3 151 aa2.57□□□□□ -2
snR50snR50 UGA3P26370 528 aa2.56□□□□□ -2
snR50snR50 IRC24P40580 263 aa2.56□□□□□ -2
snR50snR50 AGE1Q04412 482 aa2.56□□□□□ -2
snR50snR50 TYW1Q08960 810 aaKnown RBP2.56□□□□□ -2
snR50snR50 SRF1Q12516 437 aa2.55□□□□□ -2
snR50snR50 AI1P03875 834 aa2.54□□□□□ -2
snR50snR50 YPL034WQ03083 165 aa2.52□□□□□ -2.01
snR50snR50 KEX2P13134 814 aa2.51□□□□□ -2.01
snR50snR50 OSH7P38755 437 aa2.51□□□□□ -2.01
snR50snR50 UBP2Q01476 1272 aa2.51□□□□□ -2.01
snR50snR50 TPD3P31383 635 aa2.5□□□□□ -2.01
snR50snR50 ORC6P38826 435 aa2.5□□□□□ -2.01
snR50snR50 TUB4P53378 473 aa2.49□□□□□ -2.01
snR50snR50 MRT4P33201 236 aaKnown RBP2.48□□□□□ -2.01
snR50snR50 YJR098CP47139 656 aa2.48□□□□□ -2.01
snR50snR50 LSC2P53312 427 aa2.48□□□□□ -2.01
snR50snR50 SYH1Q02875 849 aaKnown RBP2.48□□□□□ -2.01
snR50snR50 TDA6Q06466 467 aa2.48□□□□□ -2.01
snR50snR50 YCK2P23292 546 aaKnown RBP2.47□□□□□ -2.01
snR50snR50 AMN1P38285 549 aaPredicted RBP2.47□□□□□ -2.01
snR50snR50 MVP1P40959 511 aaKnown RBP2.47□□□□□ -2.01
snR50snR50 SBE2P42223 864 aaKnown RBP2.47□□□□□ -2.01
snR50snR50 NAM8Q00539 523 aaKnown RBP2.47□□□□□ -2.01
snR50snR50 YMR187CQ03236 431 aa2.47□□□□□ -2.01
snR50snR50 GIS1Q03833 894 aa2.47□□□□□ -2.01
snR50snR50 TCB1Q12466 1186 aa2.47□□□□□ -2.01
snR50snR50 AAD14P42884 376 aa2.45□□□□□ -2.02
snR50snR50 YPR109WQ06104 294 aa2.45□□□□□ -2.02
snR50snR50 DLD1P32891 587 aa2.43□□□□□ -2.02
snR50snR50 MAC1P35192 417 aa2.42□□□□□ -2.02
snR50snR50 MCX1P38323 520 aaPredicted RBP2.42□□□□□ -2.02
snR50snR50 RTT106P40161 455 aa2.42□□□□□ -2.02
snR50snR50 RGR1P19263 1082 aa2.41□□□□□ -2.02
snR50snR50 HXT10P43581 546 aa2.41□□□□□ -2.02
snR50snR50 ARG82P07250 355 aa2.4□□□□□ -2.03
snR50snR50 TFA1P36100 482 aa2.4□□□□□ -2.03
snR50snR50 INP52P50942 1183 aa2.4□□□□□ -2.03
snR50snR50 MCA1Q08601 432 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms