RNA–Protein interactions for RNA: YPL235W

RVB2, Transcript of ATP-dependent DNA helicase, also known as reptin, yeastyeast

Gene RVB2, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RVB2YPL235W PDR11P40550 1411 aa8.95□□□□□ -0.98
RVB2YPL235W USO1P25386 1790 aa8.89□□□□□ -0.99
RVB2YPL235W PAF1P38351 445 aa8.89□□□□□ -0.99
RVB2YPL235W RAV1P47104 1357 aa8.86□□□□□ -0.99
RVB2YPL235W DMA1P38823 416 aa8.85□□□□□ -0.99
RVB2YPL235W TY1B-NL2Q99337 1749 aaKnown RBP8.84□□□□□ -1
RVB2YPL235W NOP7P53261 605 aaKnown RBP8.83□□□□□ -1
RVB2YPL235W YMR196WQ04336 1088 aa8.83□□□□□ -1
RVB2YPL235W PTP3P40048 928 aa8.82□□□□□ -1
RVB2YPL235W YBL029C-AQ3E756 94 aa8.82□□□□□ -1
RVB2YPL235W RTC1Q08281 1341 aa8.82□□□□□ -1
RVB2YPL235W MST1P07236 462 aa8.8□□□□□ -1
RVB2YPL235W THI12P42883 340 aa8.8□□□□□ -1
RVB2YPL235W THI5P43534 340 aa8.8□□□□□ -1
RVB2YPL235W THI11P47183 340 aa8.8□□□□□ -1
RVB2YPL235W THI13Q07748 340 aa8.8□□□□□ -1
RVB2YPL235W KRE5P22023 1365 aa8.79□□□□□ -1
RVB2YPL235W MRX12P47084 519 aa8.79□□□□□ -1
RVB2YPL235W BCK1Q01389 1478 aa8.77□□□□□ -1.01
RVB2YPL235W RIA1P53893 1110 aa8.77□□□□□ -1.01
RVB2YPL235W CFT1Q06632 1357 aaKnown RBP8.76□□□□□ -1.01
RVB2YPL235W NUP192P47054 1683 aa8.75□□□□□ -1.01
RVB2YPL235W ALD4P46367 519 aaKnown RBP8.75□□□□□ -1.01
RVB2YPL235W CAB1Q04430 367 aa8.75□□□□□ -1.01
RVB2YPL235W RAD9P14737 1309 aa8.75□□□□□ -1.01
RVB2YPL235W SSP1P38871 571 aa8.74□□□□□ -1.01
RVB2YPL235W YIL055CP40523 627 aaKnown RBP8.74□□□□□ -1.01
RVB2YPL235W YNR029CP53729 429 aaKnown RBP8.71□□□□□ -1.01
RVB2YPL235W YOR238WQ08634 303 aa8.7□□□□□ -1.02
RVB2YPL235W ESL2P36168 1195 aa8.69□□□□□ -1.02
RVB2YPL235W TAF5P38129 798 aa8.69□□□□□ -1.02
RVB2YPL235W RSM7P47150 247 aa8.69□□□□□ -1.02
RVB2YPL235W YAH1Q12184 172 aaKnown RBP8.69□□□□□ -1.02
RVB2YPL235W AI2P03876 854 aa8.68□□□□□ -1.02
RVB2YPL235W VNX1P42839 908 aa8.65□□□□□ -1.02
RVB2YPL235W TAF8Q03750 510 aa8.65□□□□□ -1.02
RVB2YPL235W NSR1P27476 414 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
RVB2YPL235W NAP1P25293 417 aaKnown RBP8.63□□□□□ -1.03
RVB2YPL235W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
RVB2YPL235W TY3B-IQ7LHG5 1498 aaKnown RBP8.61□□□□□ -1.03
RVB2YPL235W BBC1P47068 1157 aa8.61□□□□□ -1.03
RVB2YPL235W WSC3Q12215 556 aa8.6□□□□□ -1.03
RVB2YPL235W KIP3P53086 805 aaKnown RBP8.59□□□□□ -1.03
RVB2YPL235W SPE2P21182 396 aa8.57□□□□□ -1.04
RVB2YPL235W YAP5P40574 245 aa8.57□□□□□ -1.04
RVB2YPL235W RCM1P53972 490 aa8.57□□□□□ -1.04
RVB2YPL235W ORC1P54784 914 aaPredicted RBP8.56□□□□□ -1.04
RVB2YPL235W CPS1P27614 576 aa8.55□□□□□ -1.04
RVB2YPL235W PPH3P32345 308 aa8.54□□□□□ -1.04
RVB2YPL235W APP1P53933 587 aa8.53□□□□□ -1.04
RVB2YPL235W SPP1Q03012 353 aa8.53□□□□□ -1.04
RVB2YPL235W YLR271WQ06152 274 aa8.53□□□□□ -1.04
RVB2YPL235W YLR419WQ06698 1435 aaKnown RBP8.51□□□□□ -1.05
RVB2YPL235W PSK1P31374 1356 aa8.5□□□□□ -1.05
RVB2YPL235W LEO1P38439 464 aa8.49□□□□□ -1.05
RVB2YPL235W CHZ1P40019 153 aaPredicted RBP8.49□□□□□ -1.05
RVB2YPL235W PIB1Q06651 286 aa8.47□□□□□ -1.05
RVB2YPL235W AIR2Q12476 344 aaKnown RBP8.46□□□□□ -1.05
RVB2YPL235W ENT1Q12518 454 aa8.46□□□□□ -1.05
RVB2YPL235W PRP45P28004 379 aaPredicted RBP8.45□□□□□ -1.06
RVB2YPL235W SCT1P32784 759 aa8.45□□□□□ -1.06
RVB2YPL235W PSD2P53037 1138 aaKnown RBP8.45□□□□□ -1.06
RVB2YPL235W ADE6P38972 1358 aaKnown RBP8.45□□□□□ -1.06
RVB2YPL235W POL5P39985 1022 aaKnown RBP8.44□□□□□ -1.06
RVB2YPL235W LEU2P04173 364 aaPredicted RBP8.43□□□□□ -1.06
RVB2YPL235W FKH1P40466 484 aa8.43□□□□□ -1.06
RVB2YPL235W ENV9Q08651 330 aa8.43□□□□□ -1.06
RVB2YPL235W RRP5Q05022 1729 aaKnown RBP8.43□□□□□ -1.06
RVB2YPL235W TIF11P38912 153 aaKnown RBP8.42□□□□□ -1.06
RVB2YPL235W MGA2P40578 1113 aa8.42□□□□□ -1.06
RVB2YPL235W TY4B-HP0C2J7 1802 aa8.41□□□□□ -1.06
RVB2YPL235W TY4B-JP47024 1803 aa8.41□□□□□ -1.06
RVB2YPL235W PRP5P21372 849 aaPredicted RBP8.41□□□□□ -1.06
RVB2YPL235W MTR4P47047 1073 aaKnown RBP8.4□□□□□ -1.06
RVB2YPL235W YML133CQ03099 1374 aa8.4□□□□□ -1.07
RVB2YPL235W YLL067CQ07888 1374 aa8.4□□□□□ -1.07
RVB2YPL235W YLL066CQ99208 1374 aa8.4□□□□□ -1.07
RVB2YPL235W PRP43P53131 767 aaKnown RBP8.39□□□□□ -1.07
RVB2YPL235W CSE4P36012 229 aa8.38□□□□□ -1.07
RVB2YPL235W GTT3P39996 337 aa8.38□□□□□ -1.07
RVB2YPL235W RPS24AP0CX31 135 aaKnown RBP8.37□□□□□ -1.07
RVB2YPL235W RPS24BP0CX32 135 aaKnown RBP8.37□□□□□ -1.07
RVB2YPL235W GLN1P32288 370 aaKnown RBP8.37□□□□□ -1.07
RVB2YPL235W MSB3P48566 633 aaPredicted RBP8.37□□□□□ -1.07
RVB2YPL235W MRM1P25270 412 aa8.37□□□□□ -1.07
RVB2YPL235W IMH1Q06704 911 aaKnown RBP8.37□□□□□ -1.07
RVB2YPL235W RTG3P38165 486 aa8.36□□□□□ -1.07
RVB2YPL235W MHP1P43638 1398 aa8.35□□□□□ -1.07
RVB2YPL235W PDS5Q04264 1277 aa8.34□□□□□ -1.07
RVB2YPL235W MLP1Q02455 1875 aaKnown RBP8.34□□□□□ -1.08
RVB2YPL235W SLM3Q12093 417 aa8.33□□□□□ -1.08
RVB2YPL235W LDB19Q12502 818 aa8.33□□□□□ -1.08
RVB2YPL235W YRF1-2P40105 1681 aa8.33□□□□□ -1.08
RVB2YPL235W IOC2Q12072 812 aa8.32□□□□□ -1.08
RVB2YPL235W TCB1Q12466 1186 aa8.31□□□□□ -1.08
RVB2YPL235W LEU3P08638 886 aa8.3□□□□□ -1.08
RVB2YPL235W YMR074CQ04773 145 aa8.3□□□□□ -1.08
RVB2YPL235W PDI1P17967 522 aaKnown RBP8.29□□□□□ -1.08
RVB2YPL235W IES2P40154 320 aa8.29□□□□□ -1.08
RVB2YPL235W ULI1P43604 169 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms