RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W TY4B-JP47024 1803 aa7.92□□□□□ -1.14
SSO1YPL232W URB1P34241 1764 aaKnown RBP7.91□□□□□ -1.14
SSO1YPL232W FKS3Q04952 1785 aa7.88□□□□□ -1.15
SSO1YPL232W SSA1P10591 642 aaKnown RBP7.87□□□□□ -1.15
SSO1YPL232W UBP1P25037 809 aa7.84□□□□□ -1.15
SSO1YPL232W YBL086CP38177 466 aa7.83□□□□□ -1.16
SSO1YPL232W MRPL32P25348 183 aa7.81□□□□□ -1.16
SSO1YPL232W EDE1P34216 1381 aa7.81□□□□□ -1.16
SSO1YPL232W RAD9P14737 1309 aa7.79□□□□□ -1.16
SSO1YPL232W GTT3P39996 337 aa7.79□□□□□ -1.16
SSO1YPL232W CAB1Q04430 367 aa7.79□□□□□ -1.16
SSO1YPL232W RAV1P47104 1357 aa7.78□□□□□ -1.16
SSO1YPL232W YRF1-3P0CX14 1859 aa7.77□□□□□ -1.17
SSO1YPL232W YRF1-7P0CX15 1859 aa7.77□□□□□ -1.17
SSO1YPL232W YRF1-6P53819 1859 aa7.77□□□□□ -1.17
SSO1YPL232W PRP45P28004 379 aaPredicted RBP7.76□□□□□ -1.17
SSO1YPL232W UGA2P38067 497 aa7.76□□□□□ -1.17
SSO1YPL232W RPN11P43588 306 aaKnown RBP7.76□□□□□ -1.17
SSO1YPL232W RRD1P40454 393 aaKnown RBP7.75□□□□□ -1.17
SSO1YPL232W ALD4P46367 519 aaKnown RBP7.75□□□□□ -1.17
SSO1YPL232W LEU3P08638 886 aa7.74□□□□□ -1.17
SSO1YPL232W PSK1P31374 1356 aa7.72□□□□□ -1.17
SSO1YPL232W DOT5P40553 215 aa7.72□□□□□ -1.17
SSO1YPL232W IKI3Q06706 1349 aaKnown RBP7.71□□□□□ -1.18
SSO1YPL232W ROM2P51862 1356 aaKnown RBP7.71□□□□□ -1.18
SSO1YPL232W SSA2P10592 639 aaKnown RBP7.7□□□□□ -1.18
SSO1YPL232W TAF5P38129 798 aa7.7□□□□□ -1.18
SSO1YPL232W NPR2P39923 615 aa7.7□□□□□ -1.18
SSO1YPL232W ALD2P47771 506 aa7.7□□□□□ -1.18
SSO1YPL232W LYS4P49367 693 aaPredicted RBP7.7□□□□□ -1.18
SSO1YPL232W SNF2P22082 1703 aa7.69□□□□□ -1.18
SSO1YPL232W SSM4P40318 1319 aa7.69□□□□□ -1.18
SSO1YPL232W PRP5P21372 849 aaPredicted RBP7.68□□□□□ -1.18
SSO1YPL232W CPS1P27614 576 aa7.68□□□□□ -1.18
SSO1YPL232W RTC1Q08281 1341 aa7.68□□□□□ -1.18
SSO1YPL232W AVT3P36062 692 aa7.67□□□□□ -1.18
SSO1YPL232W CTH1P47976 325 aa7.67□□□□□ -1.18
SSO1YPL232W FOX2Q02207 900 aaKnown RBP7.67□□□□□ -1.18
SSO1YPL232W YIL177CP40434 1758 aa7.66□□□□□ -1.18
SSO1YPL232W YJL225CP40889 1758 aa7.66□□□□□ -1.18
SSO1YPL232W RPL17AP05740 184 aaKnown RBP7.65□□□□□ -1.18
SSO1YPL232W IES2P40154 320 aa7.65□□□□□ -1.18
SSO1YPL232W RSF2P46974 1380 aa7.65□□□□□ -1.18
SSO1YPL232W RPL17BP46990 184 aaKnown RBP7.65□□□□□ -1.18
SSO1YPL232W MSB3P48566 633 aaPredicted RBP7.65□□□□□ -1.18
SSO1YPL232W ADE6P38972 1358 aaKnown RBP7.64□□□□□ -1.19
SSO1YPL232W APC1P53886 1748 aa7.62□□□□□ -1.19
SSO1YPL232W PAF1P38351 445 aa7.62□□□□□ -1.19
SSO1YPL232W YJL181WP46987 611 aa7.62□□□□□ -1.19
SSO1YPL232W RCM1P53972 490 aa7.6□□□□□ -1.19
SSO1YPL232W BFR2Q06631 534 aaKnown RBP7.6□□□□□ -1.19
SSO1YPL232W YEF3P16521 1044 aaKnown RBP7.59□□□□□ -1.19
SSO1YPL232W PRP40P33203 583 aaKnown RBP7.59□□□□□ -1.19
SSO1YPL232W NAP1P25293 417 aaKnown RBP7.58□□□□□ -1.2
SSO1YPL232W LAM6Q08001 693 aa7.58□□□□□ -1.2
SSO1YPL232W TCB1Q12466 1186 aa7.58□□□□□ -1.2
SSO1YPL232W RIM15P43565 1770 aa7.58□□□□□ -1.2
SSO1YPL232W PPH3P32345 308 aa7.57□□□□□ -1.2
SSO1YPL232W YGL015CP33199 130 aa7.56□□□□□ -1.2
SSO1YPL232W YKR075CP36155 307 aa7.55□□□□□ -1.2
SSO1YPL232W TAF8Q03750 510 aa7.54□□□□□ -1.2
SSO1YPL232W SLM3Q12093 417 aa7.54□□□□□ -1.2
SSO1YPL232W COBP00163 385 aa7.52□□□□□ -1.21
SSO1YPL232W YKL133CP36066 463 aa7.52□□□□□ -1.21
SSO1YPL232W YRF1-4O13559 1382 aa7.51□□□□□ -1.21
SSO1YPL232W SPT7P35177 1332 aa7.51□□□□□ -1.21
SSO1YPL232W BDF1P35817 686 aa7.5□□□□□ -1.21
SSO1YPL232W ESL2P36168 1195 aa7.46□□□□□ -1.22
SSO1YPL232W EAF6P47128 113 aa7.46□□□□□ -1.22
SSO1YPL232W PRP43P53131 767 aaKnown RBP7.46□□□□□ -1.22
SSO1YPL232W ALD3P54114 506 aa7.46□□□□□ -1.22
SSO1YPL232W YLR419WQ06698 1435 aaKnown RBP7.45□□□□□ -1.22
SSO1YPL232W ENP1P38333 483 aaKnown RBP7.45□□□□□ -1.22
SSO1YPL232W XKS1P42826 600 aa7.45□□□□□ -1.22
SSO1YPL232W SSA4P22202 642 aaKnown RBP7.44□□□□□ -1.22
SSO1YPL232W NOP7P53261 605 aaKnown RBP7.44□□□□□ -1.22
SSO1YPL232W TOM1Q03280 3268 aa7.43□□□□□ -1.22
SSO1YPL232W CSE4P36012 229 aa7.4□□□□□ -1.22
SSO1YPL232W TOS1P38288 455 aa7.4□□□□□ -1.22
SSO1YPL232W MTR4P47047 1073 aaKnown RBP7.4□□□□□ -1.22
SSO1YPL232W PUS5Q06244 254 aa7.4□□□□□ -1.22
SSO1YPL232W MHP1P43638 1398 aa7.4□□□□□ -1.22
SSO1YPL232W RPS24AP0CX31 135 aaKnown RBP7.39□□□□□ -1.23
SSO1YPL232W RPS24BP0CX32 135 aaKnown RBP7.39□□□□□ -1.23
SSO1YPL232W PEX21P50091 288 aa7.39□□□□□ -1.23
SSO1YPL232W FRK1Q03002 865 aaPredicted RBP7.39□□□□□ -1.23
SSO1YPL232W SIR4P11978 1358 aa7.38□□□□□ -1.23
SSO1YPL232W SAP155P43612 1002 aa7.38□□□□□ -1.23
SSO1YPL232W MSB4Q12317 492 aa7.38□□□□□ -1.23
SSO1YPL232W LEU2P04173 364 aaPredicted RBP7.37□□□□□ -1.23
SSO1YPL232W BUG1Q12191 341 aa7.37□□□□□ -1.23
SSO1YPL232W CTT1P06115 562 aa7.36□□□□□ -1.23
SSO1YPL232W YER156CP40093 338 aaKnown RBP7.36□□□□□ -1.23
SSO1YPL232W MSN5P52918 1224 aa7.36□□□□□ -1.23
SSO1YPL232W CHZ1P40019 153 aaPredicted RBP7.35□□□□□ -1.23
SSO1YPL232W UTP22P53254 1237 aaPredicted RBP7.35□□□□□ -1.23
SSO1YPL232W SQS1P53866 767 aaKnown RBP7.35□□□□□ -1.23
SSO1YPL232W ADE16P54113 591 aaKnown RBP7.35□□□□□ -1.23
SSO1YPL232W MEC3Q02574 474 aa7.35□□□□□ -1.23
SSO1YPL232W RAD4P14736 754 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms