RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	YMR196W	Q04336	1088 aa		13.8	□□□□□ -0.2
HHO1	YPL127C	MLP1	Q02455	1875 aa	Known RBP	13.8	□□□□□ -0.2
HHO1	YPL127C	PSK1	P31374	1356 aa		13.79	□□□□□ -0.2
HHO1	YPL127C	RCM1	P53972	490 aa		13.78	□□□□□ -0.2
HHO1	YPL127C	CPS1	P27614	576 aa		13.74	□□□□□ -0.21
HHO1	YPL127C	PPH3	P32345	308 aa		13.74	□□□□□ -0.21
HHO1	YPL127C	NST1	P53935	1240 aa		13.74	□□□□□ -0.21
HHO1	YPL127C	IOC4	Q04213	475 aa		13.73	□□□□□ -0.21
HHO1	YPL127C	USO1	P25386	1790 aa		13.71	□□□□□ -0.22
HHO1	YPL127C	YML133C	Q03099	1374 aa		13.71	□□□□□ -0.22
HHO1	YPL127C	YLL067C	Q07888	1374 aa		13.71	□□□□□ -0.22
HHO1	YPL127C	YLL066C	Q99208	1374 aa		13.71	□□□□□ -0.22
HHO1	YPL127C	LEU2	P04173	364 aa	Predicted RBP	13.7	□□□□□ -0.22
HHO1	YPL127C	PRS1	P32895	427 aa	Known RBP	13.69	□□□□□ -0.22
HHO1	YPL127C	MIF2	P35201	549 aa		13.69	□□□□□ -0.22
HHO1	YPL127C	MTR4	P47047	1073 aa	Known RBP	13.66	□□□□□ -0.22
HHO1	YPL127C	YEF3	P16521	1044 aa	Known RBP	13.64	□□□□□ -0.23
HHO1	YPL127C	TAP42	Q04372	366 aa		13.64	□□□□□ -0.23
HHO1	YPL127C	THI12	P42883	340 aa		13.63	□□□□□ -0.23
HHO1	YPL127C	THI5	P43534	340 aa		13.63	□□□□□ -0.23
HHO1	YPL127C	THI11	P47183	340 aa		13.63	□□□□□ -0.23
HHO1	YPL127C	THI13	Q07748	340 aa		13.63	□□□□□ -0.23
HHO1	YPL127C	PDI1	P17967	522 aa	Known RBP	13.61	□□□□□ -0.23
HHO1	YPL127C	PRP43	P53131	767 aa	Known RBP	13.61	□□□□□ -0.23
HHO1	YPL127C	RPP0	P05317	312 aa	Known RBP	13.6	□□□□□ -0.23
HHO1	YPL127C	TRK1	P12685	1235 aa		13.6	□□□□□ -0.23
HHO1	YPL127C	RTF1	P53064	558 aa		13.58	□□□□□ -0.24
HHO1	YPL127C	GRX4	P32642	244 aa		13.57	□□□□□ -0.24
HHO1	YPL127C	ADE6	P38972	1358 aa	Known RBP	13.57	□□□□□ -0.24
HHO1	YPL127C	KAR2	P16474	682 aa	Known RBP	13.54	□□□□□ -0.24
HHO1	YPL127C	CSE4	P36012	229 aa		13.52	□□□□□ -0.25
HHO1	YPL127C	VPS27	P40343	622 aa	Known RBP	13.52	□□□□□ -0.25
HHO1	YPL127C	RPS24A	P0CX31	135 aa	Known RBP	13.5	□□□□□ -0.25
HHO1	YPL127C	RPS24B	P0CX32	135 aa	Known RBP	13.5	□□□□□ -0.25
HHO1	YPL127C	HIM1	Q06674	414 aa		13.5	□□□□□ -0.25
HHO1	YPL127C	CDC45	Q08032	650 aa		13.5	□□□□□ -0.25
HHO1	YPL127C	YDL144C	Q07589	356 aa		13.48	□□□□□ -0.25
HHO1	YPL127C	AUS1	Q08409	1394 aa		13.47	□□□□□ -0.25
HHO1	YPL127C	NOP2	P40991	618 aa	Known RBP	13.47	□□□□□ -0.25
HHO1	YPL127C	RRP46	P53256	223 aa	Predicted RBP	13.45	□□□□□ -0.26
HHO1	YPL127C	PAP2	P53632	584 aa	Known RBP	13.44	□□□□□ -0.26
HHO1	YPL127C	RTR1	P40084	226 aa	Predicted RBP	13.43	□□□□□ -0.26
HHO1	YPL127C	YRB30	P53107	440 aa	Predicted RBP	13.43	□□□□□ -0.26
HHO1	YPL127C	GAS4	Q08271	471 aa		13.43	□□□□□ -0.26
HHO1	YPL127C	MPP10	P47083	593 aa	Known RBP	13.41	□□□□□ -0.26
HHO1	YPL127C	SNF2	P22082	1703 aa		13.4	□□□□□ -0.26
HHO1	YPL127C	PTP3	P40048	928 aa		13.4	□□□□□ -0.26
HHO1	YPL127C	RPO41	P13433	1351 aa	Known RBP	13.4	□□□□□ -0.26
HHO1	YPL127C	DPS1	P04802	557 aa	Known RBP	13.39	□□□□□ -0.27
HHO1	YPL127C	RVB2	Q12464	471 aa	Known RBP	13.39	□□□□□ -0.27
HHO1	YPL127C	PRD1	P25375	712 aa		13.38	□□□□□ -0.27
HHO1	YPL127C	PRP5	P21372	849 aa	Predicted RBP	13.36	□□□□□ -0.27
HHO1	YPL127C	TY4B-H	P0C2J7	1802 aa		13.36	□□□□□ -0.27
HHO1	YPL127C	TY4B-J	P47024	1803 aa		13.36	□□□□□ -0.27
HHO1	YPL127C	SUI2	P20459	304 aa	Known RBP	13.35	□□□□□ -0.27
HHO1	YPL127C	PRP45	P28004	379 aa	Predicted RBP	13.34	□□□□□ -0.27
HHO1	YPL127C	AVT3	P36062	692 aa		13.33	□□□□□ -0.28
HHO1	YPL127C	SAP155	P43612	1002 aa		13.32	□□□□□ -0.28
HHO1	YPL127C	THI22	Q06490	572 aa		13.31	□□□□□ -0.28
HHO1	YPL127C	SLM3	Q12093	417 aa		13.31	□□□□□ -0.28
HHO1	YPL127C	AKL1	P38080	1108 aa	Known RBP	13.3	□□□□□ -0.28
HHO1	YPL127C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	13.29	□□□□□ -0.28	not detected
HHO1	YPL127C	YFR006W	P43590	535 aa		13.29	□□□□□ -0.28
HHO1	YPL127C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	13.29	□□□□□ -0.28	not detected
HHO1	YPL127C	APC1	P53886	1748 aa		13.28	□□□□□ -0.28
HHO1	YPL127C	TPD3	P31383	635 aa		13.27	□□□□□ -0.29
HHO1	YPL127C	DSD1	P53095	428 aa		13.27	□□□□□ -0.29
HHO1	YPL127C	YRF1-2	P40105	1681 aa		13.27	□□□□□ -0.29
HHO1	YPL127C	MSB3	P48566	633 aa	Predicted RBP	13.26	□□□□□ -0.29
HHO1	YPL127C	HEF3	P53978	1044 aa	Known RBP	13.26	□□□□□ -0.29
HHO1	YPL127C	RRP5	Q05022	1729 aa	Known RBP	13.25	□□□□□ -0.29
HHO1	YPL127C	YRF1-4	O13559	1382 aa		13.24	□□□□□ -0.29
HHO1	YPL127C	CTF4	Q01454	927 aa		13.24	□□□□□ -0.29
HHO1	YPL127C	TCB1	Q12466	1186 aa		13.24	□□□□□ -0.29
HHO1	YPL127C	YNL050C	P53952	270 aa		13.23	□□□□□ -0.29
HHO1	YPL127C	RTT109	Q07794	436 aa		13.23	□□□□□ -0.29
HHO1	YPL127C	NTH2	P35172	780 aa		13.21	□□□□□ -0.29
HHO1	YPL127C	YIL177C	P40434	1758 aa		13.21	□□□□□ -0.29
HHO1	YPL127C	YJL225C	P40889	1758 aa		13.21	□□□□□ -0.29
HHO1	YPL127C	FUN12	P39730	1002 aa	Known RBP	13.2	□□□□□ -0.3
HHO1	YPL127C	SIR4	P11978	1358 aa		13.2	□□□□□ -0.3
HHO1	YPL127C	HSP104	P31539	908 aa	Known RBP	13.19	□□□□□ -0.3
HHO1	YPL127C	RAD2	P07276	1031 aa		13.18	□□□□□ -0.3
HHO1	YPL127C	FPR3	P38911	411 aa	Known RBP	13.18	□□□□□ -0.3
HHO1	YPL127C	MAM1	P40065	302 aa		13.18	□□□□□ -0.3
HHO1	YPL127C	XKS1	P42826	600 aa		13.18	□□□□□ -0.3
HHO1	YPL127C	ZDS1	P50111	915 aa	Known RBP	13.18	□□□□□ -0.3
HHO1	YPL127C	ENT1	Q12518	454 aa		13.18	□□□□□ -0.3
HHO1	YPL127C	RCR1	P38212	213 aa		13.16	□□□□□ -0.3
HHO1	YPL127C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	13.16	□□□□□ -0.3	not detected
HHO1	YPL127C	YFR016C	P43597	1233 aa	Known RBP	13.16	□□□□□ -0.3
HHO1	YPL127C	GYP7	P48365	746 aa		13.16	□□□□□ -0.3
HHO1	YPL127C	AOS1	Q06624	347 aa		13.16	□□□□□ -0.3
HHO1	YPL127C	MAK21	Q12176	1025 aa	Known RBP	13.16	□□□□□ -0.3
HHO1	YPL127C	YAH1	Q12184	172 aa	Known RBP	13.16	□□□□□ -0.3
HHO1	YPL127C	URB1	P34241	1764 aa	Known RBP	13.16	□□□□□ -0.3
HHO1	YPL127C	FKS3	Q04952	1785 aa		13.16	□□□□□ -0.3
HHO1	YPL127C	REB1	P21538	810 aa		13.15	□□□□□ -0.3
HHO1	YPL127C	RSF2	P46974	1380 aa		13.15	□□□□□ -0.3
HHO1	YPL127C	DIP2	Q12220	943 aa	Predicted RBP	13.14	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms