RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RPA135	P22138	1203 aa	Known RBP	4.79	□□□□□ -1.64
HOS3	YPL116W	PAF1	P38351	445 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	NMD3	P38861	518 aa	Known RBP	4.79	□□□□□ -1.64
HOS3	YPL116W	YMR124W	P39523	943 aa	Known RBP	4.79	□□□□□ -1.64
HOS3	YPL116W	YVC1	Q12324	675 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	RPL5	P26321	297 aa	Known RBP	4.78	□□□□□ -1.64
HOS3	YPL116W	ERV41	Q04651	352 aa		4.78	□□□□□ -1.64
HOS3	YPL116W	YPR172W	Q06608	200 aa		4.78	□□□□□ -1.64
HOS3	YPL116W	TPS3	P38426	1054 aa	Known RBP	4.77	□□□□□ -1.65
HOS3	YPL116W	RIX7	Q07844	837 aa	Known RBP	4.77	□□□□□ -1.65
HOS3	YPL116W	SRP54	P20424	541 aa	Known RBP	4.76	□□□□□ -1.65
HOS3	YPL116W	YOR389W	Q08912	624 aa		4.76	□□□□□ -1.65
HOS3	YPL116W	DSN1	P40568	576 aa		4.75	□□□□□ -1.65
HOS3	YPL116W	VTC3	Q02725	835 aa		4.75	□□□□□ -1.65
HOS3	YPL116W	NOP58	Q12499	511 aa	Known RBP	4.75	□□□□□ -1.65
HOS3	YPL116W	MRX12	P47084	519 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	PRP43	P53131	767 aa	Known RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	BNI5	P53890	448 aa	Known RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	EAF7	P53911	425 aa	Known RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	HSP42	Q12329	375 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	STH1	P32597	1359 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	CHD1	P32657	1468 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	IES2	P40154	320 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	HOS2	P53096	452 aa	Predicted RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	PAP2	P53632	584 aa	Known RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	BNI4	P53858	892 aa		4.74	□□□□□ -1.65
HOS3	YPL116W	BMS1	Q08965	1183 aa	Known RBP	4.74	□□□□□ -1.65
HOS3	YPL116W	UBP1	P25037	809 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	PHO87	P25360	923 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	RRB1	Q04225	511 aa	Known RBP	4.73	□□□□□ -1.65
HOS3	YPL116W	RSC2	Q06488	889 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	UBX5	Q06682	500 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	LSP1	Q12230	341 aa	Known RBP	4.73	□□□□□ -1.65
HOS3	YPL116W	GLE1	Q12315	538 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	OPI1	P21957	404 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	MSM1	P22438	575 aa		4.73	□□□□□ -1.65
HOS3	YPL116W	POL5	P39985	1022 aa	Known RBP	4.73	□□□□□ -1.65
HOS3	YPL116W	TFG1	P41895	735 aa	Predicted RBP	4.73	□□□□□ -1.65
HOS3	YPL116W	SGT2	Q12118	346 aa	Known RBP	4.73	□□□□□ -1.65
HOS3	YPL116W	RPL17A	P05740	184 aa	Known RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	BUD31	P25337	157 aa	Predicted RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	SPB4	P25808	606 aa	Predicted RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	MRF1	P30775	413 aa	Predicted RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	SEC6	P32844	805 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	STE5	P32917	917 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	BLI1	P35727	113 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	PMC1	P38929	1173 aa	Predicted RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	ERP2	P39704	215 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	SNF7	P39929	240 aa	Known RBP	4.72	□□□□□ -1.65
HOS3	YPL116W	SLX8	P40072	274 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	ALD2	P47771	506 aa		4.72	□□□□□ -1.65
HOS3	YPL116W	CCM1	P48237	864 aa	Predicted RBP	4.71	□□□□□ -1.65
HOS3	YPL116W	RIA1	P53893	1110 aa		4.71	□□□□□ -1.65
HOS3	YPL116W	JIP5	Q06214	492 aa	Predicted RBP	4.71	□□□□□ -1.65
HOS3	YPL116W	NDL1	Q06568	189 aa		4.71	□□□□□ -1.65
HOS3	YPL116W	PUS1	Q12211	544 aa	Known RBP	4.71	□□□□□ -1.65
HOS3	YPL116W	MED8	P38304	223 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	GYP7	P48365	746 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	YGL081W	P53156	320 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	CTF4	Q01454	927 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	ORM2	Q06144	216 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	CEX1	Q12453	761 aa		4.71	□□□□□ -1.66
HOS3	YPL116W	SPA2	P23201	1466 aa	Known RBP	4.7	□□□□□ -1.66
HOS3	YPL116W	MET10	P39692	1035 aa		4.7	□□□□□ -1.66
HOS3	YPL116W	FAF1	P40546	346 aa	Predicted RBP	4.7	□□□□□ -1.66
HOS3	YPL116W	SAC3	P46674	1301 aa		4.7	□□□□□ -1.66
HOS3	YPL116W	YNL247W	P53852	767 aa	Known RBP	4.7	□□□□□ -1.66
HOS3	YPL116W	ARR1	Q06596	294 aa		4.7	□□□□□ -1.66
HOS3	YPL116W	YDL121C	Q07541	149 aa		4.7	□□□□□ -1.66
HOS3	YPL116W	TY4A-H	Q6Q5P6	413 aa		4.7	□□□□□ -1.66
HOS3	YPL116W	CDC31	P06704	161 aa	Known RBP	4.69	□□□□□ -1.66
HOS3	YPL116W	CMP2	P14747	604 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	CLB5	P30283	435 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	GCD6	P32501	712 aa	Known RBP	4.69	□□□□□ -1.66
HOS3	YPL116W	SWI3	P32591	825 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	HXT5	P38695	592 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	LAM1	P38851	1228 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	PES4	P39684	611 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	NOC2	P39744	710 aa	Known RBP	4.69	□□□□□ -1.66
HOS3	YPL116W	BFA1	P47113	574 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	JJJ1	P53863	590 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	CDC45	Q08032	650 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	PRI1	P10363	409 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	KEX2	P13134	814 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	PSO2	P30620	661 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	KDX1	P36005	433 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	MUM2	P38236	366 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	BOI2	P39969	1040 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	VPS27	P40343	622 aa	Known RBP	4.69	□□□□□ -1.66
HOS3	YPL116W	BDP1	P46678	594 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	YNL058C	P53947	316 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	APC2	Q12440	853 aa		4.69	□□□□□ -1.66
HOS3	YPL116W	YEF3	P16521	1044 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	PWP2	P25635	923 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	PPH3	P32345	308 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	MFT1	P33441	392 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	TOM20	P35180	183 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	DSF2	P38213	736 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	ECM1	P39715	212 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	APC5	Q08683	685 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 149.1 ms