RNA–Protein interactions for RNA: YOR117W

RPT5, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT5, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT5YOR117W YNR029CP53729 429 aaKnown RBP12.37□□□□□ -0.43
RPT5YOR117W KIP3P53086 805 aaKnown RBP12.37□□□□□ -0.43
RPT5YOR117W POL5P39985 1022 aaKnown RBP12.36□□□□□ -0.43
RPT5YOR117W SCT1P32784 759 aa12.34□□□□□ -0.43
RPT5YOR117W ORC1P54784 914 aaPredicted RBP12.34□□□□□ -0.43
RPT5YOR117W SPE2P21182 396 aa12.33□□□□□ -0.44
RPT5YOR117W YLR419WQ06698 1435 aaKnown RBP12.29□□□□□ -0.44
RPT5YOR117W RCM1P53972 490 aa12.23□□□□□ -0.45
RPT5YOR117W CPS1P27614 576 aa12.21□□□□□ -0.45
RPT5YOR117W CHZ1P40019 153 aaPredicted RBP12.21□□□□□ -0.45
RPT5YOR117W PPH3P32345 308 aa12.18□□□□□ -0.46
RPT5YOR117W PSK1P31374 1356 aa12.18□□□□□ -0.46
RPT5YOR117W MHP1P43638 1398 aa12.18□□□□□ -0.46
RPT5YOR117W DIP2Q12220 943 aaPredicted RBP12.16□□□□□ -0.46
RPT5YOR117W PTP3P40048 928 aa12.12□□□□□ -0.47
RPT5YOR117W BUD31P25337 157 aaPredicted RBP12.1□□□□□ -0.47
RPT5YOR117W PDS5Q04264 1277 aa12.1□□□□□ -0.47
RPT5YOR117W LEU2P04173 364 aaPredicted RBP12.09□□□□□ -0.47
RPT5YOR117W FKH1P40466 484 aa12.08□□□□□ -0.48
RPT5YOR117W MTR4P47047 1073 aaKnown RBP12.07□□□□□ -0.48
RPT5YOR117W ADE6P38972 1358 aaKnown RBP12.05□□□□□ -0.48
RPT5YOR117W RTG3P38165 486 aa12.05□□□□□ -0.48
RPT5YOR117W YML133CQ03099 1374 aa12.04□□□□□ -0.48
RPT5YOR117W YLL067CQ07888 1374 aa12.04□□□□□ -0.48
RPT5YOR117W YLL066CQ99208 1374 aa12.04□□□□□ -0.48
RPT5YOR117W YAH1Q12184 172 aaKnown RBP12.02□□□□□ -0.49
RPT5YOR117W SEC3P33332 1336 aaKnown RBP12.01□□□□□ -0.49
RPT5YOR117W PRP43P53131 767 aaKnown RBP12.01□□□□□ -0.49
RPT5YOR117W CSE4P36012 229 aa12□□□□□ -0.49
RPT5YOR117W PRP45P28004 379 aaPredicted RBP11.99□□□□□ -0.49
RPT5YOR117W RPS24AP0CX31 135 aaKnown RBP11.97□□□□□ -0.49
RPT5YOR117W RPS24BP0CX32 135 aaKnown RBP11.97□□□□□ -0.49
RPT5YOR117W PDI1P17967 522 aaKnown RBP11.96□□□□□ -0.49
RPT5YOR117W PRP5P21372 849 aaPredicted RBP11.96□□□□□ -0.49
RPT5YOR117W REB1P21538 810 aa11.95□□□□□ -0.5
RPT5YOR117W APP1P53933 587 aa11.95□□□□□ -0.5
RPT5YOR117W ENT1Q12518 454 aa11.95□□□□□ -0.5
RPT5YOR117W RTF1P53064 558 aa11.94□□□□□ -0.5
RPT5YOR117W PSD2P53037 1138 aaKnown RBP11.93□□□□□ -0.5
RPT5YOR117W MLP1Q02455 1875 aaKnown RBP11.93□□□□□ -0.5
RPT5YOR117W TAP42Q04372 366 aa11.92□□□□□ -0.5
RPT5YOR117W SPT7P35177 1332 aa11.92□□□□□ -0.5
RPT5YOR117W GRX4P32642 244 aa11.89□□□□□ -0.51
RPT5YOR117W ENV9Q08651 330 aa11.89□□□□□ -0.51
RPT5YOR117W TY4B-HP0C2J7 1802 aa11.89□□□□□ -0.51
RPT5YOR117W TY4B-JP47024 1803 aa11.89□□□□□ -0.51
RPT5YOR117W RRP5Q05022 1729 aaKnown RBP11.89□□□□□ -0.51
RPT5YOR117W MSB3P48566 633 aaPredicted RBP11.88□□□□□ -0.51
RPT5YOR117W NST1P53935 1240 aa11.87□□□□□ -0.51
RPT5YOR117W GAS4Q08271 471 aa11.86□□□□□ -0.51
RPT5YOR117W SLM3Q12093 417 aa11.86□□□□□ -0.51
RPT5YOR117W DPS1P04802 557 aaKnown RBP11.86□□□□□ -0.51
RPT5YOR117W TCB1Q12466 1186 aa11.86□□□□□ -0.51
RPT5YOR117W LEU3P08638 886 aa11.85□□□□□ -0.51
RPT5YOR117W KAR2P16474 682 aaKnown RBP11.85□□□□□ -0.51
RPT5YOR117W YEF3P16521 1044 aaKnown RBP11.85□□□□□ -0.51
RPT5YOR117W HIM1Q06674 414 aa11.84□□□□□ -0.51
RPT5YOR117W AUS1Q08409 1394 aa11.83□□□□□ -0.52
RPT5YOR117W RPL17AP05740 184 aaKnown RBP11.83□□□□□ -0.52
RPT5YOR117W RPL17BP46990 184 aaKnown RBP11.83□□□□□ -0.52
RPT5YOR117W IMH1Q06704 911 aaKnown RBP11.83□□□□□ -0.52
RPT5YOR117W YIL055CP40523 627 aaKnown RBP11.82□□□□□ -0.52
RPT5YOR117W TRK1P12685 1235 aa11.81□□□□□ -0.52
RPT5YOR117W YRF1-2P40105 1681 aa11.79□□□□□ -0.52
RPT5YOR117W RSF2P46974 1380 aa11.79□□□□□ -0.52
RPT5YOR117W ENP1P38333 483 aaKnown RBP11.77□□□□□ -0.53
RPT5YOR117W XKS1P42826 600 aa11.77□□□□□ -0.53
RPT5YOR117W IES2P40154 320 aa11.76□□□□□ -0.53
RPT5YOR117W PAP2P53632 584 aaKnown RBP11.76□□□□□ -0.53
RPT5YOR117W IOC4Q04213 475 aa11.76□□□□□ -0.53
RPT5YOR117W RPO41P13433 1351 aaKnown RBP11.75□□□□□ -0.53
RPT5YOR117W CDC27P38042 758 aa11.74□□□□□ -0.53
RPT5YOR117W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
RPT5YOR117W ROM2P51862 1356 aaKnown RBP11.69□□□□□ -0.54
RPT5YOR117W YIL177CP40434 1758 aa11.69□□□□□ -0.54
RPT5YOR117W YJL225CP40889 1758 aa11.69□□□□□ -0.54
RPT5YOR117W GLN1P32288 370 aaKnown RBP11.68□□□□□ -0.54
RPT5YOR117W RCR1P38212 213 aa11.68□□□□□ -0.54
RPT5YOR117W SIR4P11978 1358 aa11.68□□□□□ -0.54
RPT5YOR117W YKL133CP36066 463 aa11.67□□□□□ -0.54
RPT5YOR117W UBP10P53874 792 aaPredicted RBP11.67□□□□□ -0.54
RPT5YOR117W DSD1P53095 428 aa11.66□□□□□ -0.54
RPT5YOR117W RRP46P53256 223 aaPredicted RBP11.66□□□□□ -0.54
RPT5YOR117W MEC3Q02574 474 aa11.66□□□□□ -0.54
RPT5YOR117W YMR074CQ04773 145 aa11.66□□□□□ -0.54
RPT5YOR117W FKS3Q04952 1785 aa11.66□□□□□ -0.54
RPT5YOR117W APC1P53886 1748 aa11.66□□□□□ -0.54
RPT5YOR117W AKL1P38080 1108 aaKnown RBP11.65□□□□□ -0.54
RPT5YOR117W URB1P34241 1764 aaKnown RBP11.65□□□□□ -0.54
RPT5YOR117W RTR1P40084 226 aaPredicted RBP11.64□□□□□ -0.55
RPT5YOR117W DOT5P40553 215 aa11.64□□□□□ -0.55
RPT5YOR117W CTF4Q01454 927 aa11.63□□□□□ -0.55
RPT5YOR117W HSP104P31539 908 aaKnown RBP11.62□□□□□ -0.55
RPT5YOR117W FOX2Q02207 900 aaKnown RBP11.6□□□□□ -0.55
RPT5YOR117W YDL144CQ07589 356 aa11.6□□□□□ -0.55
RPT5YOR117W YRF1-4O13559 1382 aa11.6□□□□□ -0.55
RPT5YOR117W RPP0P05317 312 aaKnown RBP11.6□□□□□ -0.55
RPT5YOR117W PRD1P25375 712 aa11.6□□□□□ -0.55
RPT5YOR117W ADE16P54113 591 aaKnown RBP11.59□□□□□ -0.55
RPT5YOR117W SNF2P22082 1703 aa11.58□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms