RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeastyeast

Gene VAM10, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM10YOR068C BNI4P53858 892 aa5.61□□□□□ -1.51
VAM10YOR068C ELP4Q02884 456 aaKnown RBP5.61□□□□□ -1.51
VAM10YOR068C BMT6Q12291 365 aa5.61□□□□□ -1.51
VAM10YOR068C KEX2P13134 814 aa5.6□□□□□ -1.51
VAM10YOR068C RAM1P22007 431 aa5.6□□□□□ -1.51
VAM10YOR068C YJU3P28321 313 aa5.6□□□□□ -1.51
VAM10YOR068C ISM1P48526 1002 aa5.6□□□□□ -1.51
VAM10YOR068C PKH3Q03306 898 aaPredicted RBP5.6□□□□□ -1.51
VAM10YOR068C ERF2Q06551 359 aa5.6□□□□□ -1.51
VAM10YOR068C RTF1P53064 558 aa5.59□□□□□ -1.51
VAM10YOR068C SPT23P35210 1082 aa5.58□□□□□ -1.52
VAM10YOR068C YNL115CP53925 644 aa5.58□□□□□ -1.52
VAM10YOR068C RAD59Q12223 238 aa5.58□□□□□ -1.52
VAM10YOR068C RLF2Q12495 606 aa5.58□□□□□ -1.52
VAM10YOR068C YPR015CQ12531 247 aa5.58□□□□□ -1.52
VAM10YOR068C SLY41P22215 453 aa5.57□□□□□ -1.52
VAM10YOR068C YJL171CP46992 396 aa5.57□□□□□ -1.52
VAM10YOR068C TY1A-DR4O74302 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-HP0C2I4 478 aaKnown RBP5.56□□□□□ -1.52
VAM10YOR068C TY1A-AP0CX57 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-PR1P0CX58 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-ORP0CX59 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-PR2P0CX60 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-DR5P0CX65 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-ER2P0CX66 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-GR3P0CX67 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-LR1P0CX68 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-MR2P0CX69 440 aa5.56□□□□□ -1.52
VAM10YOR068C NPL4P33755 580 aa5.56□□□□□ -1.52
VAM10YOR068C PRE3P38624 215 aa5.56□□□□□ -1.52
VAM10YOR068C PTC2P39966 464 aaKnown RBP5.56□□□□□ -1.52
VAM10YOR068C TY1A-JR2P47099 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-DR1Q03856 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-ML1Q04706 440 aaKnown RBP5.56□□□□□ -1.52
VAM10YOR068C TY1A-BRQ12217 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-NL2Q12470 440 aa5.56□□□□□ -1.52
VAM10YOR068C TY1A-GR2Q12485 440 aa5.56□□□□□ -1.52
VAM10YOR068C SEC2P17065 759 aa5.54□□□□□ -1.52
VAM10YOR068C ARG8P18544 423 aa5.54□□□□□ -1.52
VAM10YOR068C YBL036CP38197 257 aa5.54□□□□□ -1.52
VAM10YOR068C RSC30P38781 883 aa5.54□□□□□ -1.52
VAM10YOR068C BUD20Q08004 166 aaPredicted RBP5.54□□□□□ -1.52
VAM10YOR068C TRM1P15565 570 aaKnown RBP5.53□□□□□ -1.52
VAM10YOR068C BIO2P32451 375 aa5.53□□□□□ -1.52
VAM10YOR068C BIM1P40013 344 aa5.53□□□□□ -1.52
VAM10YOR068C YJL007CP47080 104 aa5.53□□□□□ -1.52
VAM10YOR068C AGE1Q04412 482 aa5.53□□□□□ -1.52
VAM10YOR068C YML082WQ04533 649 aaKnown RBP5.53□□□□□ -1.52
VAM10YOR068C CHL1P22516 861 aaPredicted RBP5.52□□□□□ -1.53
VAM10YOR068C GCD11P32481 527 aaKnown RBP5.52□□□□□ -1.53
VAM10YOR068C ATG32P40458 529 aa5.52□□□□□ -1.53
VAM10YOR068C LAM6Q08001 693 aa5.52□□□□□ -1.53
VAM10YOR068C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VAM10YOR068C PUS6P53294 404 aa5.5□□□□□ -1.53
VAM10YOR068C TUB4P53378 473 aa5.5□□□□□ -1.53
VAM10YOR068C CSE4P36012 229 aa5.49□□□□□ -1.53
VAM10YOR068C PRT1P06103 763 aaKnown RBP5.48□□□□□ -1.53
VAM10YOR068C MAK16P10962 306 aaPredicted RBP5.48□□□□□ -1.53
VAM10YOR068C PAC1P39946 494 aaKnown RBP5.48□□□□□ -1.53
VAM10YOR068C TBF1Q02457 562 aa5.48□□□□□ -1.53
VAM10YOR068C ERG12P07277 443 aa5.47□□□□□ -1.53
VAM10YOR068C TIF1P10081 395 aaKnown RBP5.47□□□□□ -1.53
VAM10YOR068C YDL206WQ12424 762 aa5.47□□□□□ -1.53
VAM10YOR068C RRN7P40992 514 aa5.46□□□□□ -1.54
VAM10YOR068C YNL108CP53929 270 aa5.46□□□□□ -1.54
VAM10YOR068C RPL34BP40525 121 aaKnown RBP5.45□□□□□ -1.54
VAM10YOR068C SUP45P12385 437 aaKnown RBP5.44□□□□□ -1.54
VAM10YOR068C YDJ1P25491 409 aaKnown RBP5.44□□□□□ -1.54
VAM10YOR068C SPT5P27692 1063 aaKnown RBP5.44□□□□□ -1.54
VAM10YOR068C RPA14P50106 137 aa5.43□□□□□ -1.54
VAM10YOR068C ENO2P00925 437 aaKnown RBP5.42□□□□□ -1.54
VAM10YOR068C PDC1P06169 563 aaKnown RBP5.42□□□□□ -1.54
VAM10YOR068C YPR097WQ06839 1073 aa5.42□□□□□ -1.54
VAM10YOR068C YPR204WQ08995 1032 aa5.42□□□□□ -1.54
VAM10YOR068C RTG2P32608 588 aaKnown RBP5.41□□□□□ -1.54
VAM10YOR068C NAF1P53919 492 aaKnown RBP5.41□□□□□ -1.54
VAM10YOR068C GYP1Q08484 637 aa5.41□□□□□ -1.54
VAM10YOR068C PAT1P25644 796 aaKnown RBP5.4□□□□□ -1.54
VAM10YOR068C SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.54
VAM10YOR068C VRP1P37370 817 aa5.4□□□□□ -1.54
VAM10YOR068C SAS4Q04003 481 aa5.4□□□□□ -1.54
VAM10YOR068C ALR1Q08269 859 aa5.4□□□□□ -1.54
VAM10YOR068C SDH2P21801 266 aa5.39□□□□□ -1.55
VAM10YOR068C RIM21P48565 533 aa5.39□□□□□ -1.55
VAM10YOR068C KXD1P53158 218 aa5.39□□□□□ -1.55
VAM10YOR068C MCM16Q12262 181 aa5.39□□□□□ -1.55
VAM10YOR068C ENO1P00924 437 aaKnown RBP5.38□□□□□ -1.55
VAM10YOR068C MOD5P07884 428 aa5.38□□□□□ -1.55
VAM10YOR068C HXT10P43581 546 aa5.38□□□□□ -1.55
VAM10YOR068C MRX10Q05648 414 aa5.38□□□□□ -1.55
VAM10YOR068C TPD3P31383 635 aa5.37□□□□□ -1.55
VAM10YOR068C TTI1P36097 1038 aa5.37□□□□□ -1.55
VAM10YOR068C RRD1P40454 393 aaKnown RBP5.37□□□□□ -1.55
VAM10YOR068C FIG4P42837 879 aa5.37□□□□□ -1.55
VAM10YOR068C TEC1P18412 486 aa5.36□□□□□ -1.55
VAM10YOR068C CPS1P27614 576 aa5.36□□□□□ -1.55
VAM10YOR068C ISF1P32488 338 aa5.36□□□□□ -1.55
VAM10YOR068C BCK2P33306 851 aa5.36□□□□□ -1.55
VAM10YOR068C YPR084WQ06821 456 aa5.36□□□□□ -1.55
VAM10YOR068C RDS2P19541 446 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms