RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT8	YOL048C	CFT1	Q06632	1357 aa	Known RBP	11.71	□□□□□ -0.53
RRT8	YOL048C	YMR196W	Q04336	1088 aa		11.71	□□□□□ -0.53
RRT8	YOL048C	CHZ1	P40019	153 aa	Predicted RBP	11.7	□□□□□ -0.54
RRT8	YOL048C	YNR029C	P53729	429 aa	Known RBP	11.7	□□□□□ -0.54
RRT8	YOL048C	RCM1	P53972	490 aa		11.69	□□□□□ -0.54
RRT8	YOL048C	THI12	P42883	340 aa		11.68	□□□□□ -0.54
RRT8	YOL048C	THI5	P43534	340 aa		11.68	□□□□□ -0.54
RRT8	YOL048C	THI11	P47183	340 aa		11.68	□□□□□ -0.54
RRT8	YOL048C	THI13	Q07748	340 aa		11.68	□□□□□ -0.54
RRT8	YOL048C	REB1	P21538	810 aa		11.67	□□□□□ -0.54
RRT8	YOL048C	PDS5	Q04264	1277 aa		11.67	□□□□□ -0.54
RRT8	YOL048C	YFR006W	P43590	535 aa		11.65	□□□□□ -0.54
RRT8	YOL048C	LEU3	P08638	886 aa		11.64	□□□□□ -0.55
RRT8	YOL048C	SEC3	P33332	1336 aa	Known RBP	11.62	□□□□□ -0.55
RRT8	YOL048C	SPT7	P35177	1332 aa		11.62	□□□□□ -0.55
RRT8	YOL048C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.62	□□□□□ -0.55
RRT8	YOL048C	PPH3	P32345	308 aa		11.61	□□□□□ -0.55
RRT8	YOL048C	USO1	P25386	1790 aa		11.61	□□□□□ -0.55
RRT8	YOL048C	RTG3	P38165	486 aa		11.59	□□□□□ -0.55
RRT8	YOL048C	PSD2	P53037	1138 aa	Known RBP	11.59	□□□□□ -0.55
RRT8	YOL048C	CPS1	P27614	576 aa		11.58	□□□□□ -0.56
RRT8	YOL048C	FKH1	P40466	484 aa		11.54	□□□□□ -0.56
RRT8	YOL048C	PSK1	P31374	1356 aa		11.54	□□□□□ -0.56
RRT8	YOL048C	MRPL32	P25348	183 aa		11.51	□□□□□ -0.57
RRT8	YOL048C	LEU2	P04173	364 aa	Predicted RBP	11.5	□□□□□ -0.57
RRT8	YOL048C	NST1	P53935	1240 aa		11.49	□□□□□ -0.57
RRT8	YOL048C	CSE4	P36012	229 aa		11.47	□□□□□ -0.57
RRT8	YOL048C	ENP1	P38333	483 aa	Known RBP	11.47	□□□□□ -0.57
RRT8	YOL048C	YML133C	Q03099	1374 aa		11.46	□□□□□ -0.57
RRT8	YOL048C	YLL067C	Q07888	1374 aa		11.46	□□□□□ -0.57
RRT8	YOL048C	YLL066C	Q99208	1374 aa		11.46	□□□□□ -0.57
RRT8	YOL048C	MTR4	P47047	1073 aa	Known RBP	11.46	□□□□□ -0.57
RRT8	YOL048C	RPS24A	P0CX31	135 aa	Known RBP	11.44	□□□□□ -0.58
RRT8	YOL048C	RPS24B	P0CX32	135 aa	Known RBP	11.44	□□□□□ -0.58
RRT8	YOL048C	PDI1	P17967	522 aa	Known RBP	11.42	□□□□□ -0.58
RRT8	YOL048C	RTF1	P53064	558 aa		11.42	□□□□□ -0.58
RRT8	YOL048C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
RRT8	YOL048C	KAR2	P16474	682 aa	Known RBP	11.39	□□□□□ -0.59
RRT8	YOL048C	TRK1	P12685	1235 aa		11.38	□□□□□ -0.59
RRT8	YOL048C	GAS4	Q08271	471 aa		11.38	□□□□□ -0.59
RRT8	YOL048C	PRP45	P28004	379 aa	Predicted RBP	11.37	□□□□□ -0.59
RRT8	YOL048C	SPT21	P35209	758 aa		11.37	□□□□□ -0.59
RRT8	YOL048C	PTP3	P40048	928 aa		11.37	□□□□□ -0.59
RRT8	YOL048C	ADE6	P38972	1358 aa	Known RBP	11.37	□□□□□ -0.59
RRT8	YOL048C	YEF3	P16521	1044 aa	Known RBP	11.36	□□□□□ -0.59
RRT8	YOL048C	HIM1	Q06674	414 aa		11.36	□□□□□ -0.59
RRT8	YOL048C	DPS1	P04802	557 aa	Known RBP	11.35	□□□□□ -0.59
RRT8	YOL048C	PAP2	P53632	584 aa	Known RBP	11.35	□□□□□ -0.59
RRT8	YOL048C	PRP5	P21372	849 aa	Predicted RBP	11.34	□□□□□ -0.59
RRT8	YOL048C	PRP43	P53131	767 aa	Known RBP	11.34	□□□□□ -0.59
RRT8	YOL048C	TAP42	Q04372	366 aa		11.34	□□□□□ -0.59
RRT8	YOL048C	GRX4	P32642	244 aa		11.33	□□□□□ -0.6
RRT8	YOL048C	TFA1	P36100	482 aa		11.32	□□□□□ -0.6
RRT8	YOL048C	MLP1	Q02455	1875 aa	Known RBP	11.31	□□□□□ -0.6
RRT8	YOL048C	ENT1	Q12518	454 aa		11.28	□□□□□ -0.6
RRT8	YOL048C	AUS1	Q08409	1394 aa		11.28	□□□□□ -0.6
RRT8	YOL048C	MSB3	P48566	633 aa	Predicted RBP	11.27	□□□□□ -0.61
RRT8	YOL048C	APP1	P53933	587 aa		11.27	□□□□□ -0.61
RRT8	YOL048C	RTR1	P40084	226 aa	Predicted RBP	11.24	□□□□□ -0.61
RRT8	YOL048C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
RRT8	YOL048C	YDL144C	Q07589	356 aa		11.24	□□□□□ -0.61
RRT8	YOL048C	SLM3	Q12093	417 aa		11.24	□□□□□ -0.61
RRT8	YOL048C	TCB1	Q12466	1186 aa		11.24	□□□□□ -0.61
RRT8	YOL048C	ENV9	Q08651	330 aa		11.22	□□□□□ -0.61
RRT8	YOL048C	YAH1	Q12184	172 aa	Known RBP	11.22	□□□□□ -0.61
RRT8	YOL048C	PRS1	P32895	427 aa	Known RBP	11.21	□□□□□ -0.61
RRT8	YOL048C	MPP10	P47083	593 aa	Known RBP	11.2	□□□□□ -0.62
RRT8	YOL048C	RRP46	P53256	223 aa	Predicted RBP	11.2	□□□□□ -0.62
RRT8	YOL048C	RPO41	P13433	1351 aa	Known RBP	11.19	□□□□□ -0.62
RRT8	YOL048C	XKS1	P42826	600 aa		11.19	□□□□□ -0.62
RRT8	YOL048C	TY4B-H	P0C2J7	1802 aa		11.17	□□□□□ -0.62
RRT8	YOL048C	TY4B-J	P47024	1803 aa		11.17	□□□□□ -0.62
RRT8	YOL048C	IOC4	Q04213	475 aa		11.17	□□□□□ -0.62
RRT8	YOL048C	RPP0	P05317	312 aa	Known RBP	11.16	□□□□□ -0.62
RRT8	YOL048C	AKL1	P38080	1108 aa	Known RBP	11.16	□□□□□ -0.62
RRT8	YOL048C	VPS27	P40343	622 aa	Known RBP	11.15	□□□□□ -0.62
RRT8	YOL048C	RRP5	Q05022	1729 aa	Known RBP	11.15	□□□□□ -0.63
RRT8	YOL048C	PRD1	P25375	712 aa		11.14	□□□□□ -0.63
RRT8	YOL048C	IES2	P40154	320 aa		11.14	□□□□□ -0.63
RRT8	YOL048C	IMH1	Q06704	911 aa	Known RBP	11.14	□□□□□ -0.63
RRT8	YOL048C	CDC45	Q08032	650 aa		11.14	□□□□□ -0.63
RRT8	YOL048C	DSD1	P53095	428 aa		11.13	□□□□□ -0.63
RRT8	YOL048C	HSP104	P31539	908 aa	Known RBP	11.12	□□□□□ -0.63
RRT8	YOL048C	YKR023W	P36119	530 aa	Known RBP	11.12	□□□□□ -0.63
RRT8	YOL048C	RSF2	P46974	1380 aa		11.12	□□□□□ -0.63
RRT8	YOL048C	TPD3	P31383	635 aa		11.11	□□□□□ -0.63
RRT8	YOL048C	RCR1	P38212	213 aa		11.11	□□□□□ -0.63
RRT8	YOL048C	THI22	Q06490	572 aa		11.11	□□□□□ -0.63
RRT8	YOL048C	SUI2	P20459	304 aa	Known RBP	11.1	□□□□□ -0.63
RRT8	YOL048C	SAP155	P43612	1002 aa		11.1	□□□□□ -0.63
RRT8	YOL048C	RVB2	Q12464	471 aa	Known RBP	11.1	□□□□□ -0.63
RRT8	YOL048C	SNF2	P22082	1703 aa		11.09	□□□□□ -0.63
RRT8	YOL048C	YRF1-2	P40105	1681 aa		11.08	□□□□□ -0.64
RRT8	YOL048C	RIM101	P33400	625 aa		11.08	□□□□□ -0.64
RRT8	YOL048C	FUN12	P39730	1002 aa	Known RBP	11.08	□□□□□ -0.64
RRT8	YOL048C	YKL133C	P36066	463 aa		11.07	□□□□□ -0.64
RRT8	YOL048C	AOS1	Q06624	347 aa		11.07	□□□□□ -0.64
RRT8	YOL048C	YIL055C	P40523	627 aa	Known RBP	11.06	□□□□□ -0.64
RRT8	YOL048C	MEC3	Q02574	474 aa		11.06	□□□□□ -0.64
RRT8	YOL048C	RTT109	Q07794	436 aa		11.06	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms