RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C ESS1P22696 170 aa5.73□□□□□ -1.49
WHI3YNL197C MID1P41821 548 aa5.72□□□□□ -1.49
WHI3YNL197C RAD59Q12223 238 aa5.72□□□□□ -1.49
WHI3YNL197C YJU3P28321 313 aa5.71□□□□□ -1.49
WHI3YNL197C MMP1Q12372 583 aa5.71□□□□□ -1.49
WHI3YNL197C YMR196WQ04336 1088 aa5.71□□□□□ -1.5
WHI3YNL197C TUM1Q08686 304 aaKnown RBP5.71□□□□□ -1.5
WHI3YNL197C RPP1BP10622 106 aaKnown RBP5.7□□□□□ -1.5
WHI3YNL197C YBL036CP38197 257 aa5.7□□□□□ -1.5
WHI3YNL197C PKH3Q03306 898 aaPredicted RBP5.7□□□□□ -1.5
WHI3YNL197C SSA1P10591 642 aaKnown RBP5.69□□□□□ -1.5
WHI3YNL197C RSC30P38781 883 aa5.69□□□□□ -1.5
WHI3YNL197C MPC54Q08550 464 aa5.69□□□□□ -1.5
WHI3YNL197C SPT23P35210 1082 aa5.69□□□□□ -1.5
WHI3YNL197C DPL1Q05567 589 aa5.68□□□□□ -1.5
WHI3YNL197C CSE4P36012 229 aa5.67□□□□□ -1.5
WHI3YNL197C PEX29Q03370 554 aa5.67□□□□□ -1.5
WHI3YNL197C SUP45P12385 437 aaKnown RBP5.67□□□□□ -1.5
WHI3YNL197C GEF1P37020 779 aa5.67□□□□□ -1.5
WHI3YNL197C YNL108CP53929 270 aa5.66□□□□□ -1.5
WHI3YNL197C RTG2P32608 588 aaKnown RBP5.65□□□□□ -1.51
WHI3YNL197C TTI1P36097 1038 aa5.65□□□□□ -1.51
WHI3YNL197C PEX21P50091 288 aa5.65□□□□□ -1.51
WHI3YNL197C NOP8Q08287 484 aaPredicted RBP5.65□□□□□ -1.51
WHI3YNL197C YRR1Q12172 810 aa5.65□□□□□ -1.51
WHI3YNL197C ARG8P18544 423 aa5.64□□□□□ -1.51
WHI3YNL197C SSA4P22202 642 aaKnown RBP5.64□□□□□ -1.51
WHI3YNL197C YDJ1P25491 409 aaKnown RBP5.64□□□□□ -1.51
WHI3YNL197C CPS1P27614 576 aa5.64□□□□□ -1.51
WHI3YNL197C RPL34BP40525 121 aaKnown RBP5.64□□□□□ -1.51
WHI3YNL197C HAP5Q02516 242 aa5.64□□□□□ -1.51
WHI3YNL197C YML020WQ03722 664 aa5.64□□□□□ -1.51
WHI3YNL197C YPR204WQ08995 1032 aa5.64□□□□□ -1.51
WHI3YNL197C RTF1P53064 558 aa5.63□□□□□ -1.51
WHI3YNL197C NOB1Q08444 459 aaKnown RBP5.63□□□□□ -1.51
WHI3YNL197C MAK16P10962 306 aaPredicted RBP5.62□□□□□ -1.51
WHI3YNL197C SLY41P22215 453 aa5.62□□□□□ -1.51
WHI3YNL197C YNL115CP53925 644 aa5.62□□□□□ -1.51
WHI3YNL197C ISU2Q12056 156 aa5.62□□□□□ -1.51
WHI3YNL197C ENO2P00925 437 aaKnown RBP5.62□□□□□ -1.51
WHI3YNL197C BNI4P53858 892 aa5.62□□□□□ -1.51
WHI3YNL197C MRX10Q05648 414 aa5.62□□□□□ -1.51
WHI3YNL197C NMA111P53920 997 aa5.61□□□□□ -1.51
WHI3YNL197C ERF2Q06551 359 aa5.61□□□□□ -1.51
WHI3YNL197C LAM6Q08001 693 aa5.61□□□□□ -1.51
WHI3YNL197C SLX8P40072 274 aa5.6□□□□□ -1.51
WHI3YNL197C RIM21P48565 533 aa5.6□□□□□ -1.51
WHI3YNL197C ENO1P00924 437 aaKnown RBP5.6□□□□□ -1.51
WHI3YNL197C TRM1P15565 570 aaKnown RBP5.6□□□□□ -1.51
WHI3YNL197C SPT5P27692 1063 aaKnown RBP5.6□□□□□ -1.51
WHI3YNL197C SRC1Q03707 834 aa5.6□□□□□ -1.51
WHI3YNL197C YML082WQ04533 649 aaKnown RBP5.6□□□□□ -1.51
WHI3YNL197C KEX2P13134 814 aa5.59□□□□□ -1.51
WHI3YNL197C NUD1P32336 851 aa5.59□□□□□ -1.51
WHI3YNL197C PTC2P39966 464 aaKnown RBP5.59□□□□□ -1.51
WHI3YNL197C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
WHI3YNL197C PDR1P12383 1068 aa5.58□□□□□ -1.52
WHI3YNL197C PUP1P25043 261 aa5.58□□□□□ -1.52
WHI3YNL197C STR2P47164 639 aa5.57□□□□□ -1.52
WHI3YNL197C AGE1Q04412 482 aa5.57□□□□□ -1.52
WHI3YNL197C YML083CQ04526 418 aa5.56□□□□□ -1.52
WHI3YNL197C RDS2P19541 446 aaKnown RBP5.56□□□□□ -1.52
WHI3YNL197C TY1A-DR4O74302 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-HP0C2I4 478 aaKnown RBP5.55□□□□□ -1.52
WHI3YNL197C TY1A-AP0CX57 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-PR1P0CX58 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-ORP0CX59 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-PR2P0CX60 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-DR5P0CX65 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-ER2P0CX66 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-GR3P0CX67 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-LR1P0CX68 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-MR2P0CX69 440 aa5.55□□□□□ -1.52
WHI3YNL197C PEP12P32854 288 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-JR2P47099 440 aa5.55□□□□□ -1.52
WHI3YNL197C PUS6P53294 404 aa5.55□□□□□ -1.52
WHI3YNL197C NAF1P53919 492 aaKnown RBP5.55□□□□□ -1.52
WHI3YNL197C TY1A-DR1Q03856 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-ML1Q04706 440 aaKnown RBP5.55□□□□□ -1.52
WHI3YNL197C TY1A-BRQ12217 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-NL2Q12470 440 aa5.55□□□□□ -1.52
WHI3YNL197C TY1A-GR2Q12485 440 aa5.55□□□□□ -1.52
WHI3YNL197C ISM1P48526 1002 aa5.55□□□□□ -1.52
WHI3YNL197C SEC2P17065 759 aa5.54□□□□□ -1.52
WHI3YNL197C SIS2P36024 562 aa5.54□□□□□ -1.52
WHI3YNL197C RAM1P22007 431 aa5.53□□□□□ -1.52
WHI3YNL197C RGA2Q06407 1009 aa5.53□□□□□ -1.52
WHI3YNL197C MCM16Q12262 181 aa5.53□□□□□ -1.52
WHI3YNL197C TGL4P36165 910 aa5.52□□□□□ -1.53
WHI3YNL197C TUB4P53378 473 aa5.52□□□□□ -1.53
WHI3YNL197C YDL206WQ12424 762 aa5.51□□□□□ -1.53
WHI3YNL197C RPL34AP87262 121 aaPredicted RBP5.5□□□□□ -1.53
WHI3YNL197C YPP1P46951 817 aa5.49□□□□□ -1.53
WHI3YNL197C BUD20Q08004 166 aaPredicted RBP5.49□□□□□ -1.53
WHI3YNL197C CDC3P32457 520 aaKnown RBP5.49□□□□□ -1.53
WHI3YNL197C ISF1P32488 338 aa5.49□□□□□ -1.53
WHI3YNL197C TBF1Q02457 562 aa5.49□□□□□ -1.53
WHI3YNL197C YPR084WQ06821 456 aa5.49□□□□□ -1.53
WHI3YNL197C NPL4P33755 580 aa5.48□□□□□ -1.53
WHI3YNL197C RGA1P39083 1007 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms