RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W SPB4P25808 606 aaPredicted RBP9.28□□□□□ -0.92
SNN1YNL086W YPR148CQ06523 435 aa9.26□□□□□ -0.93
SNN1YNL086W YBT1P32386 1661 aa9.26□□□□□ -0.93
SNN1YNL086W GEA1P47102 1408 aaPredicted RBP9.25□□□□□ -0.93
SNN1YNL086W RTG3P38165 486 aa9.25□□□□□ -0.93
SNN1YNL086W VPS70P47161 811 aa9.25□□□□□ -0.93
SNN1YNL086W IML1P47170 1584 aa9.24□□□□□ -0.93
SNN1YNL086W BDF1P35817 686 aa9.24□□□□□ -0.93
SNN1YNL086W HAP1P0CE41 1502 aa9.23□□□□□ -0.93
SNN1YNL086W YCK3P39962 524 aa9.22□□□□□ -0.93
SNN1YNL086W RCR1P38212 213 aa9.21□□□□□ -0.94
SNN1YNL086W IPL1P38991 367 aa9.21□□□□□ -0.94
SNN1YNL086W TY1B-NL2Q99337 1749 aaKnown RBP9.2□□□□□ -0.94
SNN1YNL086W APP1P53933 587 aa9.2□□□□□ -0.94
SNN1YNL086W NUP188P52593 1655 aaKnown RBP9.19□□□□□ -0.94
SNN1YNL086W MAK11P20484 414 aaKnown RBP9.18□□□□□ -0.94
SNN1YNL086W TYS1P36421 394 aaKnown RBP9.18□□□□□ -0.94
SNN1YNL086W VMR1P38735 1592 aa9.18□□□□□ -0.94
SNN1YNL086W SCY1P53009 804 aa9.16□□□□□ -0.94
SNN1YNL086W DMA2P53924 522 aa9.16□□□□□ -0.94
SNN1YNL086W UBP10P53874 792 aaPredicted RBP9.09□□□□□ -0.95
SNN1YNL086W DSF2P38213 736 aa9.08□□□□□ -0.96
SNN1YNL086W SRB8P25648 1427 aa9.07□□□□□ -0.96
SNN1YNL086W PBS2P08018 668 aa9.06□□□□□ -0.96
SNN1YNL086W BUD21Q08492 214 aaPredicted RBP9.06□□□□□ -0.96
SNN1YNL086W COQ8P27697 501 aa9.05□□□□□ -0.96
SNN1YNL086W MAP2P38174 421 aaKnown RBP9.04□□□□□ -0.96
SNN1YNL086W VPS29P38759 282 aa9.04□□□□□ -0.96
SNN1YNL086W YMR074CQ04773 145 aa9.03□□□□□ -0.96
SNN1YNL086W NOP53Q12080 455 aaKnown RBP9.03□□□□□ -0.96
SNN1YNL086W PDR5P33302 1511 aaKnown RBP9.03□□□□□ -0.96
SNN1YNL086W YNR021WP53723 404 aaKnown RBP8.99□□□□□ -0.97
SNN1YNL086W PDR11P40550 1411 aa8.98□□□□□ -0.97
SNN1YNL086W KRE5P22023 1365 aa8.98□□□□□ -0.97
SNN1YNL086W BCK1Q01389 1478 aa8.97□□□□□ -0.97
SNN1YNL086W SLX5P32828 619 aaKnown RBP8.97□□□□□ -0.97
SNN1YNL086W YMR1P47147 688 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
SNN1YNL086W RIA1P53893 1110 aa8.97□□□□□ -0.97
SNN1YNL086W RLF2Q12495 606 aa8.96□□□□□ -0.98
SNN1YNL086W KIN1P13185 1064 aa8.95□□□□□ -0.98
SNN1YNL086W REF2P42073 533 aaPredicted RBP8.95□□□□□ -0.98
SNN1YNL086W MAM3Q12296 706 aa8.95□□□□□ -0.98
SNN1YNL086W ENT1Q12518 454 aa8.94□□□□□ -0.98
SNN1YNL086W BUD31P25337 157 aaPredicted RBP8.93□□□□□ -0.98
SNN1YNL086W MRX12P47084 519 aa8.93□□□□□ -0.98
SNN1YNL086W YGL015CP33199 130 aa8.92□□□□□ -0.98
SNN1YNL086W ENV9Q08651 330 aa8.91□□□□□ -0.98
SNN1YNL086W HGH1P48362 394 aaKnown RBP8.9□□□□□ -0.98
SNN1YNL086W YNR029CP53729 429 aaKnown RBP8.9□□□□□ -0.98
SNN1YNL086W AIM7Q12156 149 aa8.9□□□□□ -0.98
SNN1YNL086W STS1P38637 319 aa8.89□□□□□ -0.99
SNN1YNL086W IES2P40154 320 aa8.89□□□□□ -0.99
SNN1YNL086W IMH1Q06704 911 aaKnown RBP8.89□□□□□ -0.99
SNN1YNL086W CFT1Q06632 1357 aaKnown RBP8.88□□□□□ -0.99
SNN1YNL086W DBP1P24784 617 aaKnown RBP8.88□□□□□ -0.99
SNN1YNL086W EDS1P38073 919 aa8.88□□□□□ -0.99
SNN1YNL086W GLC3P32775 704 aa8.87□□□□□ -0.99
SNN1YNL086W MAK21Q12176 1025 aaKnown RBP8.87□□□□□ -0.99
SNN1YNL086W NUP42P49686 430 aaKnown RBP8.83□□□□□ -1
SNN1YNL086W YOR238WQ08634 303 aa8.83□□□□□ -1
SNN1YNL086W DIT2P21595 489 aa8.82□□□□□ -1
SNN1YNL086W PTC3P34221 468 aaKnown RBP8.81□□□□□ -1
SNN1YNL086W COX6P00427 148 aa8.8□□□□□ -1
SNN1YNL086W UBP1P25037 809 aa8.78□□□□□ -1
SNN1YNL086W ATF2P53296 535 aa8.78□□□□□ -1
SNN1YNL086W TY3B-IQ7LHG5 1498 aaKnown RBP8.77□□□□□ -1
SNN1YNL086W SSA1P10591 642 aaKnown RBP8.75□□□□□ -1.01
SNN1YNL086W GCN2P15442 1659 aa8.75□□□□□ -1.01
SNN1YNL086W YBL086CP38177 466 aa8.74□□□□□ -1.01
SNN1YNL086W TIF4632P39936 914 aaKnown RBP8.74□□□□□ -1.01
SNN1YNL086W RRD1P40454 393 aaKnown RBP8.74□□□□□ -1.01
SNN1YNL086W CAB1Q04430 367 aa8.74□□□□□ -1.01
SNN1YNL086W NSR1P27476 414 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
SNN1YNL086W GUA1P38625 525 aaKnown RBP8.72□□□□□ -1.01
SNN1YNL086W YRF1-2P40105 1681 aa8.72□□□□□ -1.01
SNN1YNL086W PRP45P28004 379 aaPredicted RBP8.71□□□□□ -1.02
SNN1YNL086W YAP5P40574 245 aa8.71□□□□□ -1.02
SNN1YNL086W RPN11P43588 306 aaKnown RBP8.7□□□□□ -1.02
SNN1YNL086W VHR2P40041 505 aa8.69□□□□□ -1.02
SNN1YNL086W ATH1P48016 1211 aa8.69□□□□□ -1.02
SNN1YNL086W RAD9P14737 1309 aa8.69□□□□□ -1.02
SNN1YNL086W VMA1P17255 1071 aaKnown RBP8.68□□□□□ -1.02
SNN1YNL086W HPC2Q01448 625 aa8.68□□□□□ -1.02
SNN1YNL086W UGA2P38067 497 aa8.67□□□□□ -1.02
SNN1YNL086W TAF5P38129 798 aa8.67□□□□□ -1.02
SNN1YNL086W PIB1Q06651 286 aa8.67□□□□□ -1.02
SNN1YNL086W RRP5Q05022 1729 aaKnown RBP8.66□□□□□ -1.02
SNN1YNL086W GRE2Q12068 342 aaKnown RBP8.66□□□□□ -1.02
SNN1YNL086W NUP192P47054 1683 aa8.65□□□□□ -1.02
SNN1YNL086W GUT1P32190 709 aa8.65□□□□□ -1.02
SNN1YNL086W UBP14P38237 781 aaKnown RBP8.65□□□□□ -1.02
SNN1YNL086W KIC1P38692 1080 aa8.65□□□□□ -1.02
SNN1YNL086W YDR090CQ03193 310 aa8.65□□□□□ -1.02
SNN1YNL086W TGL3P40308 642 aa8.63□□□□□ -1.03
SNN1YNL086W LYS4P49367 693 aaPredicted RBP8.62□□□□□ -1.03
SNN1YNL086W YLR326WQ06170 240 aaKnown RBP8.62□□□□□ -1.03
SNN1YNL086W SSA2P10592 639 aaKnown RBP8.61□□□□□ -1.03
SNN1YNL086W DOT5P40553 215 aa8.61□□□□□ -1.03
SNN1YNL086W ALD4P46367 519 aaKnown RBP8.61□□□□□ -1.03
SNN1YNL086W YJL181WP46987 611 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms