RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeastyeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCM1YNL022C YRR1Q12172 810 aa6.68□□□□□ -1.34
RCM1YNL022C FKH1P40466 484 aa6.67□□□□□ -1.34
RCM1YNL022C TYW1Q08960 810 aaKnown RBP6.67□□□□□ -1.34
RCM1YNL022C HAP5Q02516 242 aa6.66□□□□□ -1.34
RCM1YNL022C PKH3Q03306 898 aaPredicted RBP6.66□□□□□ -1.34
RCM1YNL022C KOG1P38873 1557 aa6.65□□□□□ -1.35
RCM1YNL022C PKC1P24583 1151 aa6.65□□□□□ -1.35
RCM1YNL022C YBL036CP38197 257 aa6.65□□□□□ -1.35
RCM1YNL022C NPL4P33755 580 aa6.64□□□□□ -1.35
RCM1YNL022C CSE4P36012 229 aa6.64□□□□□ -1.35
RCM1YNL022C ARH1P48360 493 aa6.64□□□□□ -1.35
RCM1YNL022C RAD59Q12223 238 aa6.64□□□□□ -1.35
RCM1YNL022C ESS1P22696 170 aa6.63□□□□□ -1.35
RCM1YNL022C NUD1P32336 851 aa6.63□□□□□ -1.35
RCM1YNL022C YNL115CP53925 644 aa6.63□□□□□ -1.35
RCM1YNL022C SAP30P38429 201 aa6.62□□□□□ -1.35
RCM1YNL022C RPL34BP40525 121 aaKnown RBP6.62□□□□□ -1.35
RCM1YNL022C LAM6Q08001 693 aa6.62□□□□□ -1.35
RCM1YNL022C REV3P14284 1504 aa6.62□□□□□ -1.35
RCM1YNL022C SLY41P22215 453 aa6.61□□□□□ -1.35
RCM1YNL022C YJL007CP47080 104 aa6.61□□□□□ -1.35
RCM1YNL022C ARG8P18544 423 aa6.6□□□□□ -1.35
RCM1YNL022C BNI4P53858 892 aa6.6□□□□□ -1.35
RCM1YNL022C SCJ1P25303 377 aa6.6□□□□□ -1.35
RCM1YNL022C BIM1P40013 344 aa6.6□□□□□ -1.35
RCM1YNL022C SPT5P27692 1063 aaKnown RBP6.59□□□□□ -1.36
RCM1YNL022C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.59□□□□□ -1.36not detected
RCM1YNL022C YJU3P28321 313 aa6.58□□□□□ -1.36
RCM1YNL022C AIR2Q12476 344 aaKnown RBP6.58□□□□□ -1.36
RCM1YNL022C AIM44Q99299 758 aa6.58□□□□□ -1.36
RCM1YNL022C ATG32P40458 529 aa6.57□□□□□ -1.36
RCM1YNL022C TBF1Q02457 562 aa6.57□□□□□ -1.36
RCM1YNL022C SIN3P22579 1536 aa6.56□□□□□ -1.36
RCM1YNL022C KEX2P13134 814 aa6.56□□□□□ -1.36
RCM1YNL022C BIO2P32451 375 aa6.56□□□□□ -1.36
RCM1YNL022C SPT23P35210 1082 aa6.56□□□□□ -1.36
RCM1YNL022C ELP4Q02884 456 aaKnown RBP6.56□□□□□ -1.36
RCM1YNL022C YML020WQ03722 664 aa6.56□□□□□ -1.36
RCM1YNL022C PDR1P12383 1068 aa6.55□□□□□ -1.36
RCM1YNL022C TRM1P15565 570 aaKnown RBP6.55□□□□□ -1.36
RCM1YNL022C PUS6P53294 404 aa6.55□□□□□ -1.36
RCM1YNL022C TIF1P10081 395 aaKnown RBP6.54□□□□□ -1.36
RCM1YNL022C SSA1P10591 642 aaKnown RBP6.54□□□□□ -1.36
RCM1YNL022C MAK16P10962 306 aaPredicted RBP6.54□□□□□ -1.36
RCM1YNL022C RSC30P38781 883 aa6.54□□□□□ -1.36
RCM1YNL022C STR2P47164 639 aa6.54□□□□□ -1.36
RCM1YNL022C THO2P53552 1597 aaKnown RBP6.54□□□□□ -1.36
RCM1YNL022C SSK2P53599 1579 aa6.54□□□□□ -1.36
RCM1YNL022C PTC2P39966 464 aaKnown RBP6.53□□□□□ -1.36
RCM1YNL022C BMT6Q12291 365 aa6.53□□□□□ -1.36
RCM1YNL022C NAF1P53919 492 aaKnown RBP6.53□□□□□ -1.36
RCM1YNL022C TAF2P23255 1407 aa6.52□□□□□ -1.37
RCM1YNL022C SIS2P36024 562 aa6.52□□□□□ -1.37
RCM1YNL022C SLX8P40072 274 aa6.52□□□□□ -1.37
RCM1YNL022C YJL171CP46992 396 aa6.52□□□□□ -1.37
RCM1YNL022C ISM1P48526 1002 aa6.52□□□□□ -1.37
RCM1YNL022C BUD4P47136 1447 aa6.51□□□□□ -1.37
RCM1YNL022C SSA4P22202 642 aaKnown RBP6.51□□□□□ -1.37
RCM1YNL022C GEF1P37020 779 aa6.51□□□□□ -1.37
RCM1YNL022C PRE3P38624 215 aa6.51□□□□□ -1.37
RCM1YNL022C YPP1P46951 817 aa6.51□□□□□ -1.37
RCM1YNL022C ECM5Q03214 1411 aa6.5□□□□□ -1.37
RCM1YNL022C GCD11P32481 527 aaKnown RBP6.5□□□□□ -1.37
RCM1YNL022C RTG2P32608 588 aaKnown RBP6.5□□□□□ -1.37
RCM1YNL022C YNL108CP53929 270 aa6.5□□□□□ -1.37
RCM1YNL022C SUP45P12385 437 aaKnown RBP6.49□□□□□ -1.37
RCM1YNL022C RAM1P22007 431 aa6.49□□□□□ -1.37
RCM1YNL022C PAT1P25644 796 aaKnown RBP6.49□□□□□ -1.37
RCM1YNL022C YML082WQ04533 649 aaKnown RBP6.49□□□□□ -1.37
RCM1YNL022C ERF2Q06551 359 aa6.49□□□□□ -1.37
RCM1YNL022C ESP1Q03018 1630 aa6.49□□□□□ -1.37
RCM1YNL022C ATG2P53855 1592 aa6.49□□□□□ -1.37
RCM1YNL022C CHL1P22516 861 aaPredicted RBP6.48□□□□□ -1.37
RCM1YNL022C TUB4P53378 473 aa6.48□□□□□ -1.37
RCM1YNL022C YDR344CQ05510 147 aa6.48□□□□□ -1.37
RCM1YNL022C YDL206WQ12424 762 aa6.48□□□□□ -1.37
RCM1YNL022C PRT1P06103 763 aaKnown RBP6.47□□□□□ -1.37
RCM1YNL022C RPA14P50106 137 aa6.47□□□□□ -1.37
RCM1YNL022C AGE1Q04412 482 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-DR4O74302 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-HP0C2I4 478 aaKnown RBP6.47□□□□□ -1.37
RCM1YNL022C TY1A-AP0CX57 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-PR1P0CX58 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-ORP0CX59 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-PR2P0CX60 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-DR5P0CX65 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-ER2P0CX66 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-GR3P0CX67 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-LR1P0CX68 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-MR2P0CX69 440 aa6.47□□□□□ -1.37
RCM1YNL022C SIS1P25294 352 aaKnown RBP6.47□□□□□ -1.37
RCM1YNL022C TY1A-JR2P47099 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-DR1Q03856 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-ML1Q04706 440 aaKnown RBP6.47□□□□□ -1.37
RCM1YNL022C SUB2Q07478 446 aaKnown RBP6.47□□□□□ -1.37
RCM1YNL022C BUD20Q08004 166 aaPredicted RBP6.47□□□□□ -1.37
RCM1YNL022C ALR1Q08269 859 aa6.47□□□□□ -1.37
RCM1YNL022C YPR204WQ08995 1032 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-BRQ12217 440 aa6.47□□□□□ -1.37
RCM1YNL022C TY1A-NL2Q12470 440 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms