RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W ALD4P46367 519 aaKnown RBP11.02□□□□□ -0.65
PRE5YMR314W IKI3Q06706 1349 aaKnown RBP11.02□□□□□ -0.65
PRE5YMR314W PRP45P28004 379 aaPredicted RBP11.01□□□□□ -0.65
PRE5YMR314W GTT3P39996 337 aa11.01□□□□□ -0.65
PRE5YMR314W LEU3P08638 886 aa10.99□□□□□ -0.65
PRE5YMR314W UGA2P38067 497 aa10.98□□□□□ -0.65
PRE5YMR314W RPN11P43588 306 aaKnown RBP10.97□□□□□ -0.65
PRE5YMR314W TAF5P38129 798 aa10.95□□□□□ -0.66
PRE5YMR314W FKS3Q04952 1785 aa10.95□□□□□ -0.66
PRE5YMR314W SSM4P40318 1319 aa10.94□□□□□ -0.66
PRE5YMR314W PAF1P38351 445 aa10.93□□□□□ -0.66
PRE5YMR314W RTC1Q08281 1341 aa10.92□□□□□ -0.66
PRE5YMR314W PSK1P31374 1356 aa10.9□□□□□ -0.66
PRE5YMR314W PRP5P21372 849 aaPredicted RBP10.9□□□□□ -0.66
PRE5YMR314W CPS1P27614 576 aa10.9□□□□□ -0.66
PRE5YMR314W DOT5P40553 215 aa10.9□□□□□ -0.66
PRE5YMR314W ALD2P47771 506 aa10.89□□□□□ -0.67
PRE5YMR314W ROM2P51862 1356 aaKnown RBP10.88□□□□□ -0.67
PRE5YMR314W SSA2P10592 639 aaKnown RBP10.87□□□□□ -0.67
PRE5YMR314W YRF1-3P0CX14 1859 aa10.87□□□□□ -0.67
PRE5YMR314W YRF1-7P0CX15 1859 aa10.87□□□□□ -0.67
PRE5YMR314W YRF1-6P53819 1859 aa10.87□□□□□ -0.67
PRE5YMR314W NAP1P25293 417 aaKnown RBP10.86□□□□□ -0.67
PRE5YMR314W LYS4P49367 693 aaPredicted RBP10.86□□□□□ -0.67
PRE5YMR314W NPR2P39923 615 aa10.85□□□□□ -0.67
PRE5YMR314W IES2P40154 320 aa10.85□□□□□ -0.67
PRE5YMR314W RRD1P40454 393 aaKnown RBP10.85□□□□□ -0.67
PRE5YMR314W BFR2Q06631 534 aaKnown RBP10.85□□□□□ -0.67
PRE5YMR314W YJL181WP46987 611 aa10.84□□□□□ -0.67
PRE5YMR314W FOX2Q02207 900 aaKnown RBP10.83□□□□□ -0.68
PRE5YMR314W MSB3P48566 633 aaPredicted RBP10.82□□□□□ -0.68
PRE5YMR314W RCM1P53972 490 aa10.81□□□□□ -0.68
PRE5YMR314W ADE6P38972 1358 aaKnown RBP10.8□□□□□ -0.68
PRE5YMR314W RSF2P46974 1380 aa10.79□□□□□ -0.68
PRE5YMR314W YEF3P16521 1044 aaKnown RBP10.79□□□□□ -0.68
PRE5YMR314W CTH1P47976 325 aa10.79□□□□□ -0.68
PRE5YMR314W PRP40P33203 583 aaKnown RBP10.77□□□□□ -0.69
PRE5YMR314W LAM6Q08001 693 aa10.77□□□□□ -0.69
PRE5YMR314W TCB1Q12466 1186 aa10.76□□□□□ -0.69
PRE5YMR314W PPH3P32345 308 aa10.74□□□□□ -0.69
PRE5YMR314W TAF8Q03750 510 aa10.74□□□□□ -0.69
PRE5YMR314W SNF2P22082 1703 aa10.7□□□□□ -0.7
PRE5YMR314W SLM3Q12093 417 aa10.69□□□□□ -0.7
PRE5YMR314W COBP00163 385 aa10.67□□□□□ -0.7
PRE5YMR314W YKL133CP36066 463 aa10.67□□□□□ -0.7
PRE5YMR314W YKR075CP36155 307 aa10.66□□□□□ -0.7
PRE5YMR314W ESL2P36168 1195 aa10.66□□□□□ -0.7
PRE5YMR314W NOP7P53261 605 aaKnown RBP10.66□□□□□ -0.7
PRE5YMR314W APC1P53886 1748 aa10.66□□□□□ -0.7
PRE5YMR314W YIL177CP40434 1758 aa10.65□□□□□ -0.7
PRE5YMR314W YJL225CP40889 1758 aa10.65□□□□□ -0.7
PRE5YMR314W SPT7P35177 1332 aa10.65□□□□□ -0.7
PRE5YMR314W ENP1P38333 483 aaKnown RBP10.63□□□□□ -0.71
PRE5YMR314W YRF1-4O13559 1382 aa10.62□□□□□ -0.71
PRE5YMR314W BDF1P35817 686 aa10.61□□□□□ -0.71
PRE5YMR314W PRP43P53131 767 aaKnown RBP10.6□□□□□ -0.71
PRE5YMR314W RPG1P38249 964 aaKnown RBP10.59□□□□□ -0.71
PRE5YMR314W ALD3P54114 506 aa10.59□□□□□ -0.71
PRE5YMR314W XKS1P42826 600 aa10.58□□□□□ -0.72
PRE5YMR314W RIM15P43565 1770 aa10.57□□□□□ -0.72
PRE5YMR314W MTR4P47047 1073 aaKnown RBP10.55□□□□□ -0.72
PRE5YMR314W CSE4P36012 229 aa10.54□□□□□ -0.72
PRE5YMR314W LEU2P04173 364 aaPredicted RBP10.53□□□□□ -0.72
PRE5YMR314W RPS24AP0CX31 135 aaKnown RBP10.51□□□□□ -0.73
PRE5YMR314W RPS24BP0CX32 135 aaKnown RBP10.51□□□□□ -0.73
PRE5YMR314W EAF6P47128 113 aa10.51□□□□□ -0.73
PRE5YMR314W YLR419WQ06698 1435 aaKnown RBP10.5□□□□□ -0.73
PRE5YMR314W MSB4Q12317 492 aa10.5□□□□□ -0.73
PRE5YMR314W SAP155P43612 1002 aa10.49□□□□□ -0.73
PRE5YMR314W TOM1Q03280 3268 aa10.48□□□□□ -0.73
PRE5YMR314W SPE2P21182 396 aa10.48□□□□□ -0.73
PRE5YMR314W MEC3Q02574 474 aa10.48□□□□□ -0.73
PRE5YMR314W FRK1Q03002 865 aaPredicted RBP10.48□□□□□ -0.73
PRE5YMR314W SSA4P22202 642 aaKnown RBP10.46□□□□□ -0.73
PRE5YMR314W CHZ1P40019 153 aaPredicted RBP10.46□□□□□ -0.73
PRE5YMR314W BUG1Q12191 341 aa10.46□□□□□ -0.73
PRE5YMR314W SIR4P11978 1358 aa10.44□□□□□ -0.74
PRE5YMR314W TOS1P38288 455 aa10.44□□□□□ -0.74
PRE5YMR314W PEX21P50091 288 aa10.44□□□□□ -0.74
PRE5YMR314W CTT1P06115 562 aa10.43□□□□□ -0.74
PRE5YMR314W UTP22P53254 1237 aaPredicted RBP10.43□□□□□ -0.74
PRE5YMR314W MHP1P43638 1398 aa10.42□□□□□ -0.74
PRE5YMR314W MSN5P52918 1224 aa10.42□□□□□ -0.74
PRE5YMR314W YER156CP40093 338 aaKnown RBP10.41□□□□□ -0.74
PRE5YMR314W ADE16P54113 591 aaKnown RBP10.41□□□□□ -0.74
PRE5YMR314W PUS5Q06244 254 aa10.41□□□□□ -0.74
PRE5YMR314W RAD4P14736 754 aa10.4□□□□□ -0.74
PRE5YMR314W KIP3P53086 805 aaKnown RBP10.39□□□□□ -0.75
PRE5YMR314W SQS1P53866 767 aaKnown RBP10.39□□□□□ -0.75
PRE5YMR314W RPO41P13433 1351 aaKnown RBP10.39□□□□□ -0.75
PRE5YMR314W RCR1P38212 213 aa10.37□□□□□ -0.75
PRE5YMR314W HPC2Q01448 625 aa10.37□□□□□ -0.75
PRE5YMR314W GRE2Q12068 342 aaKnown RBP10.37□□□□□ -0.75
PRE5YMR314W YKL222CP35995 705 aa10.36□□□□□ -0.75
PRE5YMR314W ERT1P38140 529 aa10.34□□□□□ -0.75
PRE5YMR314W KIN4Q01919 800 aa10.34□□□□□ -0.75
PRE5YMR314W ATG13Q06628 738 aa10.34□□□□□ -0.75
PRE5YMR314W RRT14P40470 206 aa10.33□□□□□ -0.76
PRE5YMR314W YML133CQ03099 1374 aa10.32□□□□□ -0.76
PRE5YMR314W YLL067CQ07888 1374 aa10.32□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms