RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W HPC2Q01448 625 aa9.5□□□□□ -0.89
GFD1YMR255W TFB3Q03290 321 aa9.5□□□□□ -0.89
GFD1YMR255W NUD1P32336 851 aa9.49□□□□□ -0.89
GFD1YMR255W SSA2P10592 639 aaKnown RBP9.48□□□□□ -0.89
GFD1YMR255W HST2P53686 357 aa9.48□□□□□ -0.89
GFD1YMR255W SIT4P20604 311 aa9.47□□□□□ -0.89
GFD1YMR255W GLN1P32288 370 aaKnown RBP9.47□□□□□ -0.89
GFD1YMR255W MMP1Q12372 583 aa9.47□□□□□ -0.89
GFD1YMR255W ESS1P22696 170 aa9.46□□□□□ -0.9
GFD1YMR255W KEX2P13134 814 aa9.45□□□□□ -0.9
GFD1YMR255W BNI4P53858 892 aa9.45□□□□□ -0.9
GFD1YMR255W PKC1P24583 1151 aa9.44□□□□□ -0.9
GFD1YMR255W SPT23P35210 1082 aa9.44□□□□□ -0.9
GFD1YMR255W BRL1P38770 471 aa9.44□□□□□ -0.9
GFD1YMR255W HGH1P48362 394 aaKnown RBP9.44□□□□□ -0.9
GFD1YMR255W ERF2Q06551 359 aa9.44□□□□□ -0.9
GFD1YMR255W NPL4P33755 580 aa9.43□□□□□ -0.9
GFD1YMR255W STR2P47164 639 aa9.43□□□□□ -0.9
GFD1YMR255W ISM1P48526 1002 aa9.43□□□□□ -0.9
GFD1YMR255W PKH3Q03306 898 aaPredicted RBP9.42□□□□□ -0.9
GFD1YMR255W RAM1P22007 431 aa9.41□□□□□ -0.9
GFD1YMR255W SLY41P22215 453 aa9.41□□□□□ -0.9
GFD1YMR255W YJU3P28321 313 aa9.41□□□□□ -0.9
GFD1YMR255W PTC2P39966 464 aaKnown RBP9.41□□□□□ -0.9
GFD1YMR255W YNL115CP53925 644 aa9.4□□□□□ -0.9
GFD1YMR255W YPR015CQ12531 247 aa9.39□□□□□ -0.91
GFD1YMR255W TY1B-DR4Q07793 1604 aa9.38□□□□□ -0.91
GFD1YMR255W DPS1P04802 557 aaKnown RBP9.38□□□□□ -0.91
GFD1YMR255W GCD11P32481 527 aaKnown RBP9.37□□□□□ -0.91
GFD1YMR255W RTF1P53064 558 aa9.36□□□□□ -0.91
GFD1YMR255W BUD20Q08004 166 aaPredicted RBP9.36□□□□□ -0.91
GFD1YMR255W RAD59Q12223 238 aa9.35□□□□□ -0.91
GFD1YMR255W ARG8P18544 423 aa9.34□□□□□ -0.91
GFD1YMR255W TY1A-DR4O74302 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-HP0C2I4 478 aaKnown RBP9.33□□□□□ -0.92
GFD1YMR255W TY1A-AP0CX57 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-PR1P0CX58 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-ORP0CX59 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-PR2P0CX60 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-DR5P0CX65 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-ER2P0CX66 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-GR3P0CX67 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-LR1P0CX68 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-MR2P0CX69 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-JR2P47099 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-DR1Q03856 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-ML1Q04706 440 aaKnown RBP9.33□□□□□ -0.92
GFD1YMR255W TY1A-BRQ12217 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-NL2Q12470 440 aa9.33□□□□□ -0.92
GFD1YMR255W TY1A-GR2Q12485 440 aa9.33□□□□□ -0.92
GFD1YMR255W SEC2P17065 759 aa9.32□□□□□ -0.92
GFD1YMR255W YML082WQ04533 649 aaKnown RBP9.32□□□□□ -0.92
GFD1YMR255W YJL007CP47080 104 aa9.3□□□□□ -0.92
GFD1YMR255W TRM1P15565 570 aaKnown RBP9.29□□□□□ -0.92
GFD1YMR255W YBL036CP38197 257 aa9.29□□□□□ -0.92
GFD1YMR255W PRT1P06103 763 aaKnown RBP9.27□□□□□ -0.93
GFD1YMR255W RSC30P38781 883 aa9.27□□□□□ -0.93
GFD1YMR255W BIM1P40013 344 aa9.26□□□□□ -0.93
GFD1YMR255W PUS6P53294 404 aa9.26□□□□□ -0.93
GFD1YMR255W TUB4P53378 473 aa9.26□□□□□ -0.93
GFD1YMR255W LAM6Q08001 693 aa9.26□□□□□ -0.93
GFD1YMR255W RLF2Q12495 606 aa9.26□□□□□ -0.93
GFD1YMR255W AGE1Q04412 482 aa9.25□□□□□ -0.93
GFD1YMR255W TBF1Q02457 562 aa9.24□□□□□ -0.93
GFD1YMR255W HSL1P34244 1518 aa9.23□□□□□ -0.93
GFD1YMR255W ATG32P40458 529 aa9.23□□□□□ -0.93
GFD1YMR255W RRN7P40992 514 aa9.23□□□□□ -0.93
GFD1YMR255W MON2P48563 1636 aaPredicted RBP9.23□□□□□ -0.93
GFD1YMR255W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
GFD1YMR255W BIO2P32451 375 aa9.21□□□□□ -0.94
GFD1YMR255W GYP1Q08484 637 aa9.21□□□□□ -0.94
GFD1YMR255W PAC1P39946 494 aaKnown RBP9.2□□□□□ -0.94
GFD1YMR255W SRC1Q03707 834 aa9.2□□□□□ -0.94
GFD1YMR255W YDL206WQ12424 762 aa9.2□□□□□ -0.94
GFD1YMR255W SPT6P23615 1451 aaKnown RBP9.19□□□□□ -0.94
GFD1YMR255W CSE4P36012 229 aa9.18□□□□□ -0.94
GFD1YMR255W YNL108CP53929 270 aa9.18□□□□□ -0.94
GFD1YMR255W SPT16P32558 1035 aaKnown RBP9.17□□□□□ -0.94
GFD1YMR255W MAK16P10962 306 aaPredicted RBP9.16□□□□□ -0.94
GFD1YMR255W TIF1P10081 395 aaKnown RBP9.15□□□□□ -0.94
GFD1YMR255W PAT1P25644 796 aaKnown RBP9.15□□□□□ -0.94
GFD1YMR255W RPL34BP40525 121 aaKnown RBP9.15□□□□□ -0.94
GFD1YMR255W ERG12P07277 443 aa9.14□□□□□ -0.95
GFD1YMR255W YDJ1P25491 409 aaKnown RBP9.14□□□□□ -0.95
GFD1YMR255W RGA2Q06407 1009 aa9.13□□□□□ -0.95
GFD1YMR255W RPA14P50106 137 aa9.12□□□□□ -0.95
GFD1YMR255W SAS4Q04003 481 aa9.12□□□□□ -0.95
GFD1YMR255W SWR1Q05471 1514 aa9.11□□□□□ -0.95
GFD1YMR255W PDC1P06169 563 aaKnown RBP9.1□□□□□ -0.95
GFD1YMR255W ALR1Q08269 859 aa9.1□□□□□ -0.95
GFD1YMR255W RTG2P32608 588 aaKnown RBP9.09□□□□□ -0.95
GFD1YMR255W KXD1P53158 218 aa9.09□□□□□ -0.95
GFD1YMR255W YPR097WQ06839 1073 aa9.09□□□□□ -0.95
GFD1YMR255W SUP45P12385 437 aaKnown RBP9.08□□□□□ -0.96
GFD1YMR255W YPR204WQ08995 1032 aa9.08□□□□□ -0.96
GFD1YMR255W HIR3P47171 1648 aa9.07□□□□□ -0.96
GFD1YMR255W ENO2P00925 437 aaKnown RBP9.07□□□□□ -0.96
GFD1YMR255W SPT5P27692 1063 aaKnown RBP9.06□□□□□ -0.96
GFD1YMR255W SDH2P21801 266 aa9.05□□□□□ -0.96
GFD1YMR255W HXT10P43581 546 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms