RNA–Protein interactions for RNA: YLR409C

UTP21, Transcript of Subunit of U3-containing 90S preribosome and SSU processome complexes, yeastyeast

Gene UTP21, Length 2,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP21YLR409C RSC30P38781 883 aa2.56□□□□□ -2
UTP21YLR409C RPL34BP40525 121 aaKnown RBP2.56□□□□□ -2
UTP21YLR409C PEP1P32319 1579 aa2.56□□□□□ -2
UTP21YLR409C SPT6P23615 1451 aaKnown RBP2.56□□□□□ -2
UTP21YLR409C CSE4P36012 229 aa2.55□□□□□ -2
UTP21YLR409C YMR196WQ04336 1088 aa2.55□□□□□ -2
UTP21YLR409C YML083CQ04526 418 aa2.55□□□□□ -2
UTP21YLR409C TUM1Q08686 304 aaKnown RBP2.55□□□□□ -2
UTP21YLR409C ENO2P00925 437 aaKnown RBP2.54□□□□□ -2
UTP21YLR409C ARG8P18544 423 aa2.54□□□□□ -2
UTP21YLR409C PUP1P25043 261 aa2.54□□□□□ -2
UTP21YLR409C PTC4P38089 393 aa2.54□□□□□ -2
UTP21YLR409C MRX10Q05648 414 aa2.54□□□□□ -2
UTP21YLR409C TFB4Q12004 338 aa2.54□□□□□ -2
UTP21YLR409C MSB4Q12317 492 aa2.54□□□□□ -2
UTP21YLR409C ENO1P00924 437 aaKnown RBP2.54□□□□□ -2
UTP21YLR409C MDS3P53094 1487 aa2.53□□□□□ -2
UTP21YLR409C TRP5P00931 707 aaKnown RBP2.53□□□□□ -2
UTP21YLR409C MID1P41821 548 aa2.53□□□□□ -2
UTP21YLR409C WSC3Q12215 556 aa2.53□□□□□ -2
UTP21YLR409C MAK16P10962 306 aaPredicted RBP2.52□□□□□ -2.01
UTP21YLR409C SLY41P22215 453 aa2.52□□□□□ -2.01
UTP21YLR409C MRX12P47084 519 aa2.52□□□□□ -2.01
UTP21YLR409C RIM21P48565 533 aa2.52□□□□□ -2.01
UTP21YLR409C REV3P14284 1504 aa2.52□□□□□ -2.01
UTP21YLR409C ERF2Q06551 359 aa2.52□□□□□ -2.01
UTP21YLR409C SIN3P22579 1536 aa2.52□□□□□ -2.01
UTP21YLR409C BUD4P47136 1447 aa2.52□□□□□ -2.01
UTP21YLR409C CDC3P32457 520 aaKnown RBP2.51□□□□□ -2.01
UTP21YLR409C MPC54Q08550 464 aa2.51□□□□□ -2.01
UTP21YLR409C YRR1Q12172 810 aa2.51□□□□□ -2.01
UTP21YLR409C RPP1BP10622 106 aaKnown RBP2.51□□□□□ -2.01
UTP21YLR409C RDS2P19541 446 aaKnown RBP2.51□□□□□ -2.01
UTP21YLR409C PEP12P32854 288 aa2.51□□□□□ -2.01
UTP21YLR409C TGL4P36165 910 aa2.51□□□□□ -2.01
UTP21YLR409C PEX21P50091 288 aa2.51□□□□□ -2.01
UTP21YLR409C YNL115CP53925 644 aa2.51□□□□□ -2.01
UTP21YLR409C RPL34AP87262 121 aaPredicted RBP2.51□□□□□ -2.01
UTP21YLR409C DPL1Q05567 589 aa2.51□□□□□ -2.01
UTP21YLR409C SSN2P38931 1420 aa2.51□□□□□ -2.01
UTP21YLR409C SEN54Q02825 467 aaPredicted RBP2.5□□□□□ -2.01
UTP21YLR409C TRM1P15565 570 aaKnown RBP2.5□□□□□ -2.01
UTP21YLR409C SPT5P27692 1063 aaKnown RBP2.5□□□□□ -2.01
UTP21YLR409C SSF1P38789 453 aaPredicted RBP2.5□□□□□ -2.01
UTP21YLR409C JIP4Q03361 876 aa2.5□□□□□ -2.01
UTP21YLR409C PML39Q03760 334 aa2.5□□□□□ -2.01
UTP21YLR409C LAM6Q08001 693 aa2.5□□□□□ -2.01
UTP21YLR409C KEX2P13134 814 aa2.5□□□□□ -2.01
UTP21YLR409C EAP1P36041 632 aaKnown RBP2.5□□□□□ -2.01
UTP21YLR409C RTF1P53064 558 aa2.5□□□□□ -2.01
UTP21YLR409C HAT1Q12341 374 aa2.5□□□□□ -2.01
UTP21YLR409C YBL029C-AQ3E756 94 aa2.5□□□□□ -2.01
UTP21YLR409C HIR3P47171 1648 aa2.49□□□□□ -2.01
UTP21YLR409C NOP2P40991 618 aaKnown RBP2.49□□□□□ -2.01
UTP21YLR409C VNX1P42839 908 aa2.49□□□□□ -2.01
UTP21YLR409C IOC2Q12072 812 aa2.49□□□□□ -2.01
UTP21YLR409C RRD1P40454 393 aaKnown RBP2.49□□□□□ -2.01
UTP21YLR409C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
UTP21YLR409C NMA111P53920 997 aa2.49□□□□□ -2.01
UTP21YLR409C ISU2Q12056 156 aa2.49□□□□□ -2.01
UTP21YLR409C SGS1P35187 1447 aa2.48□□□□□ -2.01
UTP21YLR409C SIS2P36024 562 aa2.48□□□□□ -2.01
UTP21YLR409C ULI1P43604 169 aa2.48□□□□□ -2.01
UTP21YLR409C PUS6P53294 404 aa2.48□□□□□ -2.01
UTP21YLR409C ORC1P54784 914 aaPredicted RBP2.48□□□□□ -2.01
UTP21YLR409C PEX29Q03370 554 aa2.48□□□□□ -2.01
UTP21YLR409C PDR1P12383 1068 aa2.48□□□□□ -2.01
UTP21YLR409C NUD1P32336 851 aa2.48□□□□□ -2.01
UTP21YLR409C ISF1P32488 338 aa2.48□□□□□ -2.01
UTP21YLR409C SLD2P34252 453 aa2.48□□□□□ -2.01
UTP21YLR409C NAF1P53919 492 aaKnown RBP2.48□□□□□ -2.01
UTP21YLR409C ECM23Q02710 187 aa2.48□□□□□ -2.01
UTP21YLR409C AGE1Q04412 482 aa2.48□□□□□ -2.01
UTP21YLR409C MCM16Q12262 181 aa2.48□□□□□ -2.01
UTP21YLR409C ATG2P53855 1592 aa2.47□□□□□ -2.01
UTP21YLR409C KTR7P40504 517 aa2.47□□□□□ -2.01
UTP21YLR409C STR2P47164 639 aa2.47□□□□□ -2.01
UTP21YLR409C MYO2P19524 1574 aaKnown RBP2.47□□□□□ -2.01
UTP21YLR409C SEC2P17065 759 aa2.47□□□□□ -2.01
UTP21YLR409C TPS3P38426 1054 aaKnown RBP2.47□□□□□ -2.01
UTP21YLR409C TIF11P38912 153 aaKnown RBP2.47□□□□□ -2.01
UTP21YLR409C ISM1P48526 1002 aa2.47□□□□□ -2.01
UTP21YLR409C EMP47P43555 445 aa2.46□□□□□ -2.01
UTP21YLR409C YNL035CP53962 389 aaKnown RBP2.46□□□□□ -2.01
UTP21YLR409C TY1A-DR4O74302 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-HP0C2I4 478 aaKnown RBP2.46□□□□□ -2.02
UTP21YLR409C TY1A-AP0CX57 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-PR1P0CX58 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-ORP0CX59 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-PR2P0CX60 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-DR5P0CX65 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-ER2P0CX66 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-GR3P0CX67 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-LR1P0CX68 440 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-MR2P0CX69 440 aa2.46□□□□□ -2.02
UTP21YLR409C HEM3P28789 327 aa2.46□□□□□ -2.02
UTP21YLR409C RRN6P32786 894 aa2.46□□□□□ -2.02
UTP21YLR409C YPP1P46951 817 aa2.46□□□□□ -2.02
UTP21YLR409C YJL171CP46992 396 aa2.46□□□□□ -2.02
UTP21YLR409C TY1A-JR2P47099 440 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms