RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W BUD20Q08004 166 aaPredicted RBP7.22□□□□□ -1.25
VPS38YLR360W KEX2P13134 814 aa7.21□□□□□ -1.26
VPS38YLR360W GYP1Q08484 637 aa7.21□□□□□ -1.26
VPS38YLR360W SRC1Q03707 834 aa7.19□□□□□ -1.26
VPS38YLR360W ERF2Q06551 359 aa7.19□□□□□ -1.26
VPS38YLR360W PRT1P06103 763 aaKnown RBP7.18□□□□□ -1.26
VPS38YLR360W RAS1P01119 309 aa7.17□□□□□ -1.26
VPS38YLR360W SIT4P20604 311 aa7.17□□□□□ -1.26
VPS38YLR360W SCJ1P25303 377 aa7.17□□□□□ -1.26
VPS38YLR360W CSN12P47130 423 aa7.17□□□□□ -1.26
VPS38YLR360W TYW1Q08960 810 aaKnown RBP7.17□□□□□ -1.26
VPS38YLR360W YNL115CP53925 644 aa7.16□□□□□ -1.26
VPS38YLR360W SLY41P22215 453 aa7.15□□□□□ -1.26
VPS38YLR360W GLN1P32288 370 aaKnown RBP7.15□□□□□ -1.26
VPS38YLR360W GUA1P38625 525 aaKnown RBP7.15□□□□□ -1.26
VPS38YLR360W HST2P53686 357 aa7.15□□□□□ -1.26
VPS38YLR360W MMP1Q12372 583 aa7.15□□□□□ -1.26
VPS38YLR360W TY1A-DR4O74302 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-HP0C2I4 478 aaKnown RBP7.14□□□□□ -1.27
VPS38YLR360W TY1A-AP0CX57 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-PR1P0CX58 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-ORP0CX59 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-PR2P0CX60 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-DR5P0CX65 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-ER2P0CX66 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-GR3P0CX67 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-LR1P0CX68 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-MR2P0CX69 440 aa7.14□□□□□ -1.27
VPS38YLR360W SEC2P17065 759 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-JR2P47099 440 aa7.14□□□□□ -1.27
VPS38YLR360W RTF1P53064 558 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-DR1Q03856 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-ML1Q04706 440 aaKnown RBP7.14□□□□□ -1.27
VPS38YLR360W TY1A-BRQ12217 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-NL2Q12470 440 aa7.14□□□□□ -1.27
VPS38YLR360W TY1A-GR2Q12485 440 aa7.14□□□□□ -1.27
VPS38YLR360W SAS4Q04003 481 aa7.13□□□□□ -1.27
VPS38YLR360W ESS1P22696 170 aa7.12□□□□□ -1.27
VPS38YLR360W SDH2P21801 266 aa7.11□□□□□ -1.27
VPS38YLR360W KTR1P27810 393 aaKnown RBP7.11□□□□□ -1.27
VPS38YLR360W SSA2P10592 639 aaKnown RBP7.1□□□□□ -1.27
VPS38YLR360W SPT16P32558 1035 aaKnown RBP7.1□□□□□ -1.27
VPS38YLR360W RRN7P40992 514 aa7.1□□□□□ -1.27
VPS38YLR360W PAT1P25644 796 aaKnown RBP7.09□□□□□ -1.27
VPS38YLR360W PKH3Q03306 898 aaPredicted RBP7.09□□□□□ -1.27
VPS38YLR360W TUB4P53378 473 aa7.08□□□□□ -1.28
VPS38YLR360W AMS1P22855 1083 aa7.07□□□□□ -1.28
VPS38YLR360W YJU3P28321 313 aa7.07□□□□□ -1.28
VPS38YLR360W MRF1P30775 413 aaPredicted RBP7.06□□□□□ -1.28
VPS38YLR360W TBF1Q02457 562 aa7.05□□□□□ -1.28
VPS38YLR360W AGE1Q04412 482 aa7.05□□□□□ -1.28
VPS38YLR360W PUS6P53294 404 aa7.04□□□□□ -1.28
VPS38YLR360W ERG12P07277 443 aa7.03□□□□□ -1.28
VPS38YLR360W TRM1P15565 570 aaKnown RBP7.03□□□□□ -1.28
VPS38YLR360W ARG8P18544 423 aa7.03□□□□□ -1.28
VPS38YLR360W PAC1P39946 494 aaKnown RBP7.03□□□□□ -1.28
VPS38YLR360W BRL1P38770 471 aa7.02□□□□□ -1.28
VPS38YLR360W HPC2Q01448 625 aa7.02□□□□□ -1.28
VPS38YLR360W TFB3Q03290 321 aa7.01□□□□□ -1.29
VPS38YLR360W RAD59Q12223 238 aa7.01□□□□□ -1.29
VPS38YLR360W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
VPS38YLR360W LAM6Q08001 693 aa7.01□□□□□ -1.29
VPS38YLR360W DMA2P53924 522 aa7□□□□□ -1.29
VPS38YLR360W YDL206WQ12424 762 aa7□□□□□ -1.29
VPS38YLR360W HGH1P48362 394 aaKnown RBP6.99□□□□□ -1.29
VPS38YLR360W KXD1P53158 218 aa6.99□□□□□ -1.29
VPS38YLR360W YEL077CQ3E7X8 1277 aa6.99□□□□□ -1.29
VPS38YLR360W RSC30P38781 883 aa6.97□□□□□ -1.29
VPS38YLR360W TRK1P12685 1235 aa6.96□□□□□ -1.3
VPS38YLR360W PKC1P24583 1151 aa6.96□□□□□ -1.3
VPS38YLR360W RPA14P50106 137 aa6.95□□□□□ -1.3
VPS38YLR360W FRK1Q03002 865 aaPredicted RBP6.95□□□□□ -1.3
VPS38YLR360W ALR1Q08269 859 aa6.95□□□□□ -1.3
VPS38YLR360W CST6P40535 587 aa6.94□□□□□ -1.3
VPS38YLR360W RGA2Q06407 1009 aa6.94□□□□□ -1.3
VPS38YLR360W PDC1P06169 563 aaKnown RBP6.93□□□□□ -1.3
VPS38YLR360W YBL036CP38197 257 aa6.93□□□□□ -1.3
VPS38YLR360W HXT10P43581 546 aa6.93□□□□□ -1.3
VPS38YLR360W BDP1P46678 594 aa6.93□□□□□ -1.3
VPS38YLR360W YPR097WQ06839 1073 aa6.93□□□□□ -1.3
VPS38YLR360W MOD5P07884 428 aa6.91□□□□□ -1.3
VPS38YLR360W PUS5Q06244 254 aa6.9□□□□□ -1.3
VPS38YLR360W CSE4P36012 229 aa6.88□□□□□ -1.31
VPS38YLR360W RRD1P40454 393 aaKnown RBP6.88□□□□□ -1.31
VPS38YLR360W YJL007CP47080 104 aa6.88□□□□□ -1.31
VPS38YLR360W CLA4P48562 842 aa6.88□□□□□ -1.31
VPS38YLR360W AIR1P40507 360 aaKnown RBP6.87□□□□□ -1.31
VPS38YLR360W MAK16P10962 306 aaPredicted RBP6.86□□□□□ -1.31
VPS38YLR360W TPD3P31383 635 aa6.86□□□□□ -1.31
VPS38YLR360W RGA1P39083 1007 aa6.85□□□□□ -1.31
VPS38YLR360W KIP2P28743 706 aa6.84□□□□□ -1.31
VPS38YLR360W BIM1P40013 344 aa6.82□□□□□ -1.32
VPS38YLR360W YNL108CP53929 270 aa6.82□□□□□ -1.32
VPS38YLR360W YDJ1P25491 409 aaKnown RBP6.81□□□□□ -1.32
VPS38YLR360W BIO2P32451 375 aa6.81□□□□□ -1.32
VPS38YLR360W SYH1Q02875 849 aaKnown RBP6.81□□□□□ -1.32
VPS38YLR360W TEC1P18412 486 aa6.8□□□□□ -1.32
VPS38YLR360W VAC17P25591 423 aa6.8□□□□□ -1.32
VPS38YLR360W IXR1P33417 597 aa6.8□□□□□ -1.32
VPS38YLR360W FIG4P42837 879 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms