RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeastyeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI6YLR182W TY1A-DR1Q03856 440 aa3.72□□□□□ -1.81
SWI6YLR182W TY1A-ML1Q04706 440 aaKnown RBP3.72□□□□□ -1.81
SWI6YLR182W TY1A-BRQ12217 440 aa3.72□□□□□ -1.81
SWI6YLR182W TY1A-NL2Q12470 440 aa3.72□□□□□ -1.81
SWI6YLR182W TY1A-GR2Q12485 440 aa3.72□□□□□ -1.81
SWI6YLR182W ISM1P48526 1002 aa3.72□□□□□ -1.81
SWI6YLR182W BNI4P53858 892 aa3.72□□□□□ -1.81
SWI6YLR182W SIT4P20604 311 aa3.71□□□□□ -1.82
SWI6YLR182W NUD1P32336 851 aa3.71□□□□□ -1.82
SWI6YLR182W DMA2P53924 522 aa3.71□□□□□ -1.82
SWI6YLR182W BUD20Q08004 166 aaPredicted RBP3.71□□□□□ -1.82
SWI6YLR182W ELP4Q02884 456 aaKnown RBP3.7□□□□□ -1.82
SWI6YLR182W KEX2P13134 814 aa3.7□□□□□ -1.82
SWI6YLR182W CHL1P22516 861 aaPredicted RBP3.7□□□□□ -1.82
SWI6YLR182W BCK2P33306 851 aa3.69□□□□□ -1.82
SWI6YLR182W PEX21P50091 288 aa3.69□□□□□ -1.82
SWI6YLR182W AGE1Q04412 482 aa3.69□□□□□ -1.82
SWI6YLR182W SPT23P35210 1082 aa3.69□□□□□ -1.82
SWI6YLR182W YML082WQ04533 649 aaKnown RBP3.69□□□□□ -1.82
SWI6YLR182W YJU3P28321 313 aa3.68□□□□□ -1.82
SWI6YLR182W SDH2P21801 266 aa3.68□□□□□ -1.82
SWI6YLR182W ESS1P22696 170 aa3.68□□□□□ -1.82
SWI6YLR182W PKC1P24583 1151 aa3.68□□□□□ -1.82
SWI6YLR182W RPP1BP10622 106 aaKnown RBP3.67□□□□□ -1.82
SWI6YLR182W CSN12P47130 423 aa3.67□□□□□ -1.82
SWI6YLR182W HST2P53686 357 aa3.67□□□□□ -1.82
SWI6YLR182W CLB5P30283 435 aa3.66□□□□□ -1.82
SWI6YLR182W RSC30P38781 883 aa3.66□□□□□ -1.82
SWI6YLR182W PTC2P39966 464 aaKnown RBP3.66□□□□□ -1.82
SWI6YLR182W TFB3Q03290 321 aa3.65□□□□□ -1.82
SWI6YLR182W VRP1P37370 817 aa3.64□□□□□ -1.83
SWI6YLR182W TUB4P53378 473 aa3.64□□□□□ -1.83
SWI6YLR182W YNL115CP53925 644 aa3.64□□□□□ -1.83
SWI6YLR182W MMP1Q12372 583 aa3.64□□□□□ -1.83
SWI6YLR182W SLY41P22215 453 aa3.63□□□□□ -1.83
SWI6YLR182W GLN1P32288 370 aaKnown RBP3.63□□□□□ -1.83
SWI6YLR182W PAC1P39946 494 aaKnown RBP3.63□□□□□ -1.83
SWI6YLR182W HPC2Q01448 625 aa3.63□□□□□ -1.83
SWI6YLR182W GCD11P32481 527 aaKnown RBP3.62□□□□□ -1.83
SWI6YLR182W RTF1P53064 558 aa3.62□□□□□ -1.83
SWI6YLR182W YMR196WQ04336 1088 aa3.62□□□□□ -1.83
SWI6YLR182W PRT1P06103 763 aaKnown RBP3.61□□□□□ -1.83
SWI6YLR182W PKH3Q03306 898 aaPredicted RBP3.61□□□□□ -1.83
SWI6YLR182W RAD59Q12223 238 aa3.61□□□□□ -1.83
SWI6YLR182W TRM1P15565 570 aaKnown RBP3.61□□□□□ -1.83
SWI6YLR182W RRN7P40992 514 aa3.6□□□□□ -1.83
SWI6YLR182W MOD5P07884 428 aa3.59□□□□□ -1.83
SWI6YLR182W GBP2P25555 427 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SWI6YLR182W NPL4P33755 580 aa3.59□□□□□ -1.83
SWI6YLR182W SSA2P10592 639 aaKnown RBP3.59□□□□□ -1.84
SWI6YLR182W BIO2P32451 375 aa3.58□□□□□ -1.84
SWI6YLR182W YDL206WQ12424 762 aa3.58□□□□□ -1.84
SWI6YLR182W ARG8P18544 423 aa3.57□□□□□ -1.84
SWI6YLR182W YDJ1P25491 409 aaKnown RBP3.57□□□□□ -1.84
SWI6YLR182W PUS6P53294 404 aa3.57□□□□□ -1.84
SWI6YLR182W ATG32P40458 529 aa3.56□□□□□ -1.84
SWI6YLR182W CST6P40535 587 aa3.56□□□□□ -1.84
SWI6YLR182W PDC1P06169 563 aaKnown RBP3.56□□□□□ -1.84
SWI6YLR182W GYP1Q08484 637 aa3.56□□□□□ -1.84
SWI6YLR182W BIM1P40013 344 aa3.55□□□□□ -1.84
SWI6YLR182W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SWI6YLR182W ITT1Q04638 464 aa3.55□□□□□ -1.84
SWI6YLR182W ERG12P07277 443 aa3.55□□□□□ -1.84
SWI6YLR182W XDJ1P39102 459 aa3.55□□□□□ -1.84
SWI6YLR182W YJL007CP47080 104 aa3.55□□□□□ -1.84
SWI6YLR182W RAS1P01119 309 aa3.54□□□□□ -1.84
SWI6YLR182W BRL1P38770 471 aa3.54□□□□□ -1.84
SWI6YLR182W MAK16P10962 306 aaPredicted RBP3.54□□□□□ -1.84
SWI6YLR182W SAS4Q04003 481 aa3.54□□□□□ -1.84
SWI6YLR182W YPR097WQ06839 1073 aa3.54□□□□□ -1.84
SWI6YLR182W LAM6Q08001 693 aa3.54□□□□□ -1.84
SWI6YLR182W BDP1P46678 594 aa3.53□□□□□ -1.84
SWI6YLR182W CLA4P48562 842 aa3.53□□□□□ -1.84
SWI6YLR182W YNL108CP53929 270 aa3.53□□□□□ -1.84
SWI6YLR182W YPR084WQ06821 456 aa3.53□□□□□ -1.84
SWI6YLR182W TIF1P10081 395 aaKnown RBP3.53□□□□□ -1.84
SWI6YLR182W SUP45P12385 437 aaKnown RBP3.53□□□□□ -1.84
SWI6YLR182W HXT10P43581 546 aa3.53□□□□□ -1.84
SWI6YLR182W RPA14P50106 137 aa3.53□□□□□ -1.84
SWI6YLR182W SPT16P32558 1035 aaKnown RBP3.52□□□□□ -1.85
SWI6YLR182W PUS5Q06244 254 aa3.52□□□□□ -1.85
SWI6YLR182W DPS1P04802 557 aaKnown RBP3.52□□□□□ -1.85
SWI6YLR182W RRD1P40454 393 aaKnown RBP3.52□□□□□ -1.85
SWI6YLR182W ENO2P00925 437 aaKnown RBP3.51□□□□□ -1.85
SWI6YLR182W TPD3P31383 635 aa3.51□□□□□ -1.85
SWI6YLR182W YBL036CP38197 257 aa3.51□□□□□ -1.85
SWI6YLR182W FIG4P42837 879 aa3.51□□□□□ -1.85
SWI6YLR182W RDS2P19541 446 aaKnown RBP3.51□□□□□ -1.85
SWI6YLR182W ISF1P32488 338 aa3.51□□□□□ -1.85
SWI6YLR182W TBF1Q02457 562 aa3.51□□□□□ -1.85
SWI6YLR182W CSE4P36012 229 aa3.5□□□□□ -1.85
SWI6YLR182W AIR1P40507 360 aaKnown RBP3.5□□□□□ -1.85
SWI6YLR182W TAF7Q05021 590 aa3.5□□□□□ -1.85
SWI6YLR182W VAC17P25591 423 aa3.49□□□□□ -1.85
SWI6YLR182W FRK1Q03002 865 aaPredicted RBP3.49□□□□□ -1.85
SWI6YLR182W ALR1Q08269 859 aa3.49□□□□□ -1.85
SWI6YLR182W RIM21P48565 533 aa3.49□□□□□ -1.85
SWI6YLR182W MRX10Q05648 414 aa3.49□□□□□ -1.85
SWI6YLR182W AMS1P22855 1083 aa3.48□□□□□ -1.85
SWI6YLR182W SRC1Q03707 834 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms