RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSF1	YLR087C	RRP14	P36080	434 aa	Known RBP	2.76	□□□□□ -1.97
CSF1	YLR087C	OSW7	P43611	510 aa		2.76	□□□□□ -1.97
CSF1	YLR087C	MDM38	Q08179	573 aa		2.76	□□□□□ -1.97
CSF1	YLR087C	HSL1	P34244	1518 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	VPS34	P22543	875 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	BDP1	P46678	594 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SSK2	P53599	1579 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	RAD3	P06839	778 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SWI3	P32591	825 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	YHR218W	P38899	603 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	YBL111C	Q3E7Y5	667 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SEN2	P16658	377 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	MSM1	P22438	575 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	NPR3	P38742	1146 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	MPP10	P47083	593 aa	Known RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	CDC10	P25342	322 aa	Known RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	YML119W	Q03208	357 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SIR4	P11978	1358 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	UBP1	P25037	809 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SXM1	Q04175	944 aa	Known RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	TY3B-G	Q99315	1547 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	SAS3	P34218	831 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	RPG1	P38249	964 aa	Known RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	UTP22	P53254	1237 aa	Predicted RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	PEA2	P40091	420 aa		2.75	□□□□□ -1.97
CSF1	YLR087C	YRB1	P41920	201 aa	Known RBP	2.75	□□□□□ -1.97
CSF1	YLR087C	PDI1	P17967	522 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	YNL247W	P53852	767 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	YTA6	P40328	754 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	KRE28	Q04431	385 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	AUS1	Q08409	1394 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	ARO1	P08566	1588 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	SPT16	P32558	1035 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	SPT21	P35209	758 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	YRO2	P38079	344 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	HSP42	Q12329	375 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	CLC1	P17891	233 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	TIF4631	P39935	952 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	NOP14	Q99207	810 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	PUF6	Q04373	656 aa	Known RBP	2.74	□□□□□ -1.97
CSF1	YLR087C	SRB8	P25648	1427 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	YAP3	P38749	330 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	YIR014W	P40570	242 aa		2.74	□□□□□ -1.97
CSF1	YLR087C	DSN1	P40568	576 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	PGA2	P53903	129 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	RAD9	P14737	1309 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	IKI3	Q06706	1349 aa	Known RBP	2.73	□□□□□ -1.97
CSF1	YLR087C	DMA1	P38823	416 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	KSS1	P14681	368 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	CFT1	Q06632	1357 aa	Known RBP	2.73	□□□□□ -1.97
CSF1	YLR087C	PXA2	P34230	853 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	TOM70	P07213	617 aa	Known RBP	2.73	□□□□□ -1.97
CSF1	YLR087C	KEL2	P50090	882 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	MCM3	P24279	971 aa	Known RBP	2.73	□□□□□ -1.97
CSF1	YLR087C	NKP1	Q12493	238 aa		2.73	□□□□□ -1.97
CSF1	YLR087C	JIP3	O13555	125 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	GPD2	P41911	440 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	LAM5	P43560	674 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	MET5	P47169	1442 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	SCC2	Q04002	1493 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	ENV11	P53246	860 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	NOP58	Q12499	511 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	PRE8	P23639	250 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	PET123	P17558	318 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	TCD1	P38756	429 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	YOL098C	Q12496	1037 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	YKL100C	P34248	587 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	CUS1	Q02554	436 aa	Predicted RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	NUP159	P40477	1460 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	SES1	P07284	462 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	RIO2	P40160	425 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	MMR1	Q06324	491 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	PDR12	Q02785	1511 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	PWP1	P21304	576 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	VPS1	P21576	704 aa	Known RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	HOS4	P40480	1083 aa		2.72	□□□□□ -1.97
CSF1	YLR087C	NOC3	Q07896	663 aa	Predicted RBP	2.72	□□□□□ -1.97
CSF1	YLR087C	RPN1	P38764	993 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	MRD1	Q06106	887 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	RAV1	P47104	1357 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	SPS1	P08458	490 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	SPC19	Q03954	165 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	SLA1	P32790	1244 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	FAF1	P40546	346 aa	Predicted RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	SNU71	P53207	620 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	PXA1	P41909	870 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	CCM1	P48237	864 aa	Predicted RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	ECM16	Q04217	1267 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	RRP5	Q05022	1729 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	LSC1	P53598	329 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	PKH1	Q03407	766 aa		2.71	□□□□□ -1.98
CSF1	YLR087C	NOP12	Q08208	459 aa	Known RBP	2.71	□□□□□ -1.98
CSF1	YLR087C	SWI6	P09959	803 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	CCL1	P37366	393 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	TIF11	P38912	153 aa	Known RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	KIP2	P28743	706 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	CPR5	P35176	225 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	BMS1	Q08965	1183 aa	Known RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	HIF1	Q12373	385 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	MLP2	P40457	1679 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms