RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeast

Gene BUD20, Length 501 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD20	YLR074C	NUP192	P47054	1683 aa		11.84	□□□□□ -0.51
BUD20	YLR074C	ALD4	P46367	519 aa	Known RBP	11.84	□□□□□ -0.51
BUD20	YLR074C	LYS4	P49367	693 aa	Predicted RBP	11.81	□□□□□ -0.52
BUD20	YLR074C	TAF5	P38129	798 aa		11.8	□□□□□ -0.52
BUD20	YLR074C	DOT5	P40553	215 aa		11.8	□□□□□ -0.52
BUD20	YLR074C	ALD2	P47771	506 aa		11.78	□□□□□ -0.52
BUD20	YLR074C	SSA2	P10592	639 aa	Known RBP	11.77	□□□□□ -0.53
BUD20	YLR074C	NPR2	P39923	615 aa		11.76	□□□□□ -0.53
BUD20	YLR074C	PRP5	P21372	849 aa	Predicted RBP	11.75	□□□□□ -0.53
BUD20	YLR074C	EDE1	P34216	1381 aa		11.74	□□□□□ -0.53
BUD20	YLR074C	RAV1	P47104	1357 aa		11.74	□□□□□ -0.53
BUD20	YLR074C	CPS1	P27614	576 aa		11.7	□□□□□ -0.54
BUD20	YLR074C	IES2	P40154	320 aa		11.7	□□□□□ -0.54
BUD20	YLR074C	YJL181W	P46987	611 aa		11.7	□□□□□ -0.54
BUD20	YLR074C	FOX2	Q02207	900 aa	Known RBP	11.7	□□□□□ -0.54
BUD20	YLR074C	PSK1	P31374	1356 aa		11.69	□□□□□ -0.54
BUD20	YLR074C	CTH1	P47976	325 aa		11.69	□□□□□ -0.54
BUD20	YLR074C	URB1	P34241	1764 aa	Known RBP	11.69	□□□□□ -0.54
BUD20	YLR074C	MSB3	P48566	633 aa	Predicted RBP	11.67	□□□□□ -0.54
BUD20	YLR074C	IKI3	Q06706	1349 aa	Known RBP	11.66	□□□□□ -0.54
BUD20	YLR074C	PAF1	P38351	445 aa		11.65	□□□□□ -0.54
BUD20	YLR074C	ROM2	P51862	1356 aa	Known RBP	11.65	□□□□□ -0.55
BUD20	YLR074C	SSM4	P40318	1319 aa		11.63	□□□□□ -0.55
BUD20	YLR074C	RTC1	Q08281	1341 aa		11.63	□□□□□ -0.55
BUD20	YLR074C	YEF3	P16521	1044 aa	Known RBP	11.61	□□□□□ -0.55
BUD20	YLR074C	RCM1	P53972	490 aa		11.61	□□□□□ -0.55
BUD20	YLR074C	NAP1	P25293	417 aa	Known RBP	11.6	□□□□□ -0.55
BUD20	YLR074C	LAM6	Q08001	693 aa		11.6	□□□□□ -0.55
BUD20	YLR074C	PRP40	P33203	583 aa	Known RBP	11.59	□□□□□ -0.55
BUD20	YLR074C	TY4B-H	P0C2J7	1802 aa		11.58	□□□□□ -0.56
BUD20	YLR074C	TY4B-J	P47024	1803 aa		11.58	□□□□□ -0.56
BUD20	YLR074C	BFR2	Q06631	534 aa	Known RBP	11.58	□□□□□ -0.56
BUD20	YLR074C	TCB1	Q12466	1186 aa		11.58	□□□□□ -0.56
BUD20	YLR074C	RSF2	P46974	1380 aa		11.55	□□□□□ -0.56
BUD20	YLR074C	PPH3	P32345	308 aa		11.55	□□□□□ -0.56
BUD20	YLR074C	FKS3	Q04952	1785 aa		11.54	□□□□□ -0.56
BUD20	YLR074C	TAF8	Q03750	510 aa		11.53	□□□□□ -0.56
BUD20	YLR074C	COB	P00163	385 aa		11.52	□□□□□ -0.57
BUD20	YLR074C	RPG1	P38249	964 aa	Known RBP	11.52	□□□□□ -0.57
BUD20	YLR074C	ADE6	P38972	1358 aa	Known RBP	11.52	□□□□□ -0.57
BUD20	YLR074C	YKR075C	P36155	307 aa		11.51	□□□□□ -0.57
BUD20	YLR074C	SLM3	Q12093	417 aa		11.5	□□□□□ -0.57
BUD20	YLR074C	YKL133C	P36066	463 aa		11.49	□□□□□ -0.57
BUD20	YLR074C	YRF1-3	P0CX14	1859 aa		11.49	□□□□□ -0.57
BUD20	YLR074C	YRF1-7	P0CX15	1859 aa		11.49	□□□□□ -0.57
BUD20	YLR074C	YRF1-6	P53819	1859 aa		11.49	□□□□□ -0.57
BUD20	YLR074C	SPT7	P35177	1332 aa		11.43	□□□□□ -0.58
BUD20	YLR074C	BDF1	P35817	686 aa		11.43	□□□□□ -0.58
BUD20	YLR074C	ENP1	P38333	483 aa	Known RBP	11.43	□□□□□ -0.58
BUD20	YLR074C	ALD3	P54114	506 aa		11.43	□□□□□ -0.58
BUD20	YLR074C	TOM1	Q03280	3268 aa		11.43	□□□□□ -0.58
BUD20	YLR074C	EAF6	P47128	113 aa		11.42	□□□□□ -0.58
BUD20	YLR074C	YRF1-4	O13559	1382 aa		11.41	□□□□□ -0.58
BUD20	YLR074C	ESL2	P36168	1195 aa		11.39	□□□□□ -0.59
BUD20	YLR074C	XKS1	P42826	600 aa		11.38	□□□□□ -0.59
BUD20	YLR074C	SSA4	P22202	642 aa	Known RBP	11.37	□□□□□ -0.59
BUD20	YLR074C	PRP43	P53131	767 aa	Known RBP	11.36	□□□□□ -0.59
BUD20	YLR074C	NOP7	P53261	605 aa	Known RBP	11.35	□□□□□ -0.59
BUD20	YLR074C	SNF2	P22082	1703 aa		11.33	□□□□□ -0.6
BUD20	YLR074C	CSE4	P36012	229 aa		11.33	□□□□□ -0.6
BUD20	YLR074C	SAP155	P43612	1002 aa		11.33	□□□□□ -0.6
BUD20	YLR074C	PEX21	P50091	288 aa		11.32	□□□□□ -0.6
BUD20	YLR074C	RPS24A	P0CX31	135 aa	Known RBP	11.3	□□□□□ -0.6
BUD20	YLR074C	RPS24B	P0CX32	135 aa	Known RBP	11.3	□□□□□ -0.6
BUD20	YLR074C	PUS5	Q06244	254 aa		11.3	□□□□□ -0.6
BUD20	YLR074C	MSB4	Q12317	492 aa		11.3	□□□□□ -0.6
BUD20	YLR074C	LEU2	P04173	364 aa	Predicted RBP	11.28	□□□□□ -0.6
BUD20	YLR074C	CTT1	P06115	562 aa		11.27	□□□□□ -0.61
BUD20	YLR074C	TOS1	P38288	455 aa		11.27	□□□□□ -0.61
BUD20	YLR074C	MTR4	P47047	1073 aa	Known RBP	11.27	□□□□□ -0.61
BUD20	YLR074C	MSN5	P52918	1224 aa		11.27	□□□□□ -0.61
BUD20	YLR074C	SQS1	P53866	767 aa	Known RBP	11.27	□□□□□ -0.61
BUD20	YLR074C	FRK1	Q03002	865 aa	Predicted RBP	11.27	□□□□□ -0.61
BUD20	YLR074C	CHZ1	P40019	153 aa	Predicted RBP	11.26	□□□□□ -0.61
BUD20	YLR074C	BUG1	Q12191	341 aa		11.25	□□□□□ -0.61
BUD20	YLR074C	APC1	P53886	1748 aa		11.24	□□□□□ -0.61
BUD20	YLR074C	YER156C	P40093	338 aa	Known RBP	11.24	□□□□□ -0.61
BUD20	YLR074C	MEC3	Q02574	474 aa		11.23	□□□□□ -0.61
BUD20	YLR074C	UTP22	P53254	1237 aa	Predicted RBP	11.21	□□□□□ -0.61
BUD20	YLR074C	KIN4	Q01919	800 aa		11.21	□□□□□ -0.61
BUD20	YLR074C	YLR419W	Q06698	1435 aa	Known RBP	11.2	□□□□□ -0.62
BUD20	YLR074C	MHP1	P43638	1398 aa		11.2	□□□□□ -0.62
BUD20	YLR074C	SPE2	P21182	396 aa		11.2	□□□□□ -0.62
BUD20	YLR074C	ADE16	P54113	591 aa	Known RBP	11.2	□□□□□ -0.62
BUD20	YLR074C	YIL177C	P40434	1758 aa		11.19	□□□□□ -0.62
BUD20	YLR074C	YJL225C	P40889	1758 aa		11.19	□□□□□ -0.62
BUD20	YLR074C	HPC2	Q01448	625 aa		11.19	□□□□□ -0.62
BUD20	YLR074C	GRE2	Q12068	342 aa	Known RBP	11.18	□□□□□ -0.62
BUD20	YLR074C	RAD4	P14736	754 aa		11.17	□□□□□ -0.62
BUD20	YLR074C	YKL222C	P35995	705 aa		11.17	□□□□□ -0.62
BUD20	YLR074C	ERT1	P38140	529 aa		11.16	□□□□□ -0.62
BUD20	YLR074C	RCR1	P38212	213 aa		11.16	□□□□□ -0.62
BUD20	YLR074C	RPO41	P13433	1351 aa	Known RBP	11.16	□□□□□ -0.62
BUD20	YLR074C	CWH41	P53008	833 aa		11.15	□□□□□ -0.62
BUD20	YLR074C	RRT14	P40470	206 aa		11.12	□□□□□ -0.63
BUD20	YLR074C	DUS1	P53759	423 aa	Known RBP	11.12	□□□□□ -0.63
BUD20	YLR074C	ATG13	Q06628	738 aa		11.12	□□□□□ -0.63
BUD20	YLR074C	SIR4	P11978	1358 aa		11.12	□□□□□ -0.63
BUD20	YLR074C	KIP3	P53086	805 aa	Known RBP	11.11	□□□□□ -0.63
BUD20	YLR074C	FPK1	P53739	893 aa		11.11	□□□□□ -0.63

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