RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C TY1A-DR4O74302 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-HP0C2I4 478 aaKnown RBP6.01□□□□□ -1.45
AFB1YLR040C TY1A-AP0CX57 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-PR1P0CX58 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-ORP0CX59 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-PR2P0CX60 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-DR5P0CX65 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-ER2P0CX66 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-GR3P0CX67 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-LR1P0CX68 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-MR2P0CX69 440 aa6.01□□□□□ -1.45
AFB1YLR040C XDJ1P39102 459 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-JR2P47099 440 aa6.01□□□□□ -1.45
AFB1YLR040C FPK1P53739 893 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-DR1Q03856 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-ML1Q04706 440 aaKnown RBP6.01□□□□□ -1.45
AFB1YLR040C TY1A-BRQ12217 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-NL2Q12470 440 aa6.01□□□□□ -1.45
AFB1YLR040C TY1A-GR2Q12485 440 aa6.01□□□□□ -1.45
AFB1YLR040C PRT1P06103 763 aaKnown RBP6□□□□□ -1.45
AFB1YLR040C SCJ1P25303 377 aa5.99□□□□□ -1.45
AFB1YLR040C LEO1P38439 464 aa5.99□□□□□ -1.45
AFB1YLR040C GYP1Q08484 637 aa5.99□□□□□ -1.45
AFB1YLR040C YNL115CP53925 644 aa5.97□□□□□ -1.45
AFB1YLR040C TYW1Q08960 810 aaKnown RBP5.97□□□□□ -1.45
AFB1YLR040C KTR1P27810 393 aaKnown RBP5.96□□□□□ -1.46
AFB1YLR040C YMR196WQ04336 1088 aa5.96□□□□□ -1.46
AFB1YLR040C RGA2Q06407 1009 aa5.96□□□□□ -1.46
AFB1YLR040C SDH2P21801 266 aa5.95□□□□□ -1.46
AFB1YLR040C HST2P53686 357 aa5.95□□□□□ -1.46
AFB1YLR040C SAS4Q04003 481 aa5.95□□□□□ -1.46
AFB1YLR040C GUA1P38625 525 aaKnown RBP5.94□□□□□ -1.46
AFB1YLR040C CSN12P47130 423 aa5.94□□□□□ -1.46
AFB1YLR040C RTF1P53064 558 aa5.94□□□□□ -1.46
AFB1YLR040C MMP1Q12372 583 aa5.94□□□□□ -1.46
AFB1YLR040C SLY41P22215 453 aa5.93□□□□□ -1.46
AFB1YLR040C AGE1Q04412 482 aa5.93□□□□□ -1.46
AFB1YLR040C ESS1P22696 170 aa5.92□□□□□ -1.46
AFB1YLR040C GLN1P32288 370 aaKnown RBP5.92□□□□□ -1.46
AFB1YLR040C RRN7P40992 514 aa5.92□□□□□ -1.46
AFB1YLR040C TUB4P53378 473 aa5.92□□□□□ -1.46
AFB1YLR040C YJU3P28321 313 aa5.9□□□□□ -1.46
AFB1YLR040C PAC1P39946 494 aaKnown RBP5.9□□□□□ -1.46
AFB1YLR040C SPT16P32558 1035 aaKnown RBP5.89□□□□□ -1.47
AFB1YLR040C RAS1P01119 309 aa5.87□□□□□ -1.47
AFB1YLR040C MRF1P30775 413 aaPredicted RBP5.86□□□□□ -1.47
AFB1YLR040C PUS6P53294 404 aa5.86□□□□□ -1.47
AFB1YLR040C PKH3Q03306 898 aaPredicted RBP5.86□□□□□ -1.47
AFB1YLR040C TRM1P15565 570 aaKnown RBP5.85□□□□□ -1.47
AFB1YLR040C PAT1P25644 796 aaKnown RBP5.85□□□□□ -1.47
AFB1YLR040C RSC30P38781 883 aa5.85□□□□□ -1.47
AFB1YLR040C DPS1P04802 557 aaKnown RBP5.84□□□□□ -1.47
AFB1YLR040C ERG12P07277 443 aa5.84□□□□□ -1.47
AFB1YLR040C CST6P40535 587 aa5.84□□□□□ -1.47
AFB1YLR040C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
AFB1YLR040C MOD5P07884 428 aa5.83□□□□□ -1.48
AFB1YLR040C SSA2P10592 639 aaKnown RBP5.83□□□□□ -1.48
AFB1YLR040C AMS1P22855 1083 aa5.83□□□□□ -1.48
AFB1YLR040C ARG8P18544 423 aa5.82□□□□□ -1.48
AFB1YLR040C HPC2Q01448 625 aa5.82□□□□□ -1.48
AFB1YLR040C RAD59Q12223 238 aa5.82□□□□□ -1.48
AFB1YLR040C TFB3Q03290 321 aa5.81□□□□□ -1.48
AFB1YLR040C YDL206WQ12424 762 aa5.81□□□□□ -1.48
AFB1YLR040C PDC1P06169 563 aaKnown RBP5.8□□□□□ -1.48
AFB1YLR040C TBF1Q02457 562 aa5.8□□□□□ -1.48
AFB1YLR040C LAM6Q08001 693 aa5.8□□□□□ -1.48
AFB1YLR040C YEL077CQ3E7X8 1277 aa5.8□□□□□ -1.48
AFB1YLR040C PKC1P24583 1151 aa5.79□□□□□ -1.48
AFB1YLR040C BDP1P46678 594 aa5.79□□□□□ -1.48
AFB1YLR040C RPA14P50106 137 aa5.79□□□□□ -1.48
AFB1YLR040C FRK1Q03002 865 aaPredicted RBP5.79□□□□□ -1.48
AFB1YLR040C YPR097WQ06839 1073 aa5.79□□□□□ -1.48
AFB1YLR040C HXT10P43581 546 aa5.78□□□□□ -1.48
AFB1YLR040C KXD1P53158 218 aa5.78□□□□□ -1.48
AFB1YLR040C DMA2P53924 522 aa5.77□□□□□ -1.49
AFB1YLR040C ALR1Q08269 859 aa5.77□□□□□ -1.49
AFB1YLR040C PUS5Q06244 254 aa5.76□□□□□ -1.49
AFB1YLR040C TPD3P31383 635 aa5.75□□□□□ -1.49
AFB1YLR040C CLA4P48562 842 aa5.75□□□□□ -1.49
AFB1YLR040C BRL1P38770 471 aa5.74□□□□□ -1.49
AFB1YLR040C RRD1P40454 393 aaKnown RBP5.73□□□□□ -1.49
AFB1YLR040C AIR1P40507 360 aaKnown RBP5.71□□□□□ -1.5
AFB1YLR040C SRC1Q03707 834 aa5.71□□□□□ -1.5
AFB1YLR040C MAK16P10962 306 aaPredicted RBP5.7□□□□□ -1.5
AFB1YLR040C YBL036CP38197 257 aa5.7□□□□□ -1.5
AFB1YLR040C CSE4P36012 229 aa5.69□□□□□ -1.5
AFB1YLR040C HED1Q03937 162 aa5.69□□□□□ -1.5
AFB1YLR040C ITT1Q04638 464 aa5.69□□□□□ -1.5
AFB1YLR040C FIG4P42837 879 aa5.68□□□□□ -1.5
AFB1YLR040C YDJ1P25491 409 aaKnown RBP5.67□□□□□ -1.5
AFB1YLR040C VAC17P25591 423 aa5.67□□□□□ -1.5
AFB1YLR040C YJL007CP47080 104 aa5.67□□□□□ -1.5
AFB1YLR040C BIO2P32451 375 aa5.66□□□□□ -1.5
AFB1YLR040C KIP2P28743 706 aa5.65□□□□□ -1.5
AFB1YLR040C IXR1P33417 597 aa5.65□□□□□ -1.5
AFB1YLR040C BIM1P40013 344 aa5.65□□□□□ -1.5
AFB1YLR040C SYH1Q02875 849 aaKnown RBP5.65□□□□□ -1.5
AFB1YLR040C MET32Q12041 191 aa5.65□□□□□ -1.5
AFB1YLR040C CDC4P07834 779 aa5.64□□□□□ -1.51
AFB1YLR040C ATG32P40458 529 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms