RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeastyeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP3YKL211C TRM732Q03496 1420 aa7.59□□□□□ -1.19
TRP3YKL211C TUM1Q08686 304 aaKnown RBP7.59□□□□□ -1.19
TRP3YKL211C ERG12P07277 443 aa7.58□□□□□ -1.2
TRP3YKL211C SDH2P21801 266 aa7.58□□□□□ -1.2
TRP3YKL211C COX6P00427 148 aa7.57□□□□□ -1.2
TRP3YKL211C NUD1P32336 851 aa7.56□□□□□ -1.2
TRP3YKL211C POL1P13382 1468 aa7.55□□□□□ -1.2
TRP3YKL211C ORC6P38826 435 aa7.55□□□□□ -1.2
TRP3YKL211C VPS70P47161 811 aa7.55□□□□□ -1.2
TRP3YKL211C STR2P47164 639 aa7.55□□□□□ -1.2
TRP3YKL211C RGA1P39083 1007 aa7.54□□□□□ -1.2
TRP3YKL211C ISM1P48526 1002 aa7.54□□□□□ -1.2
TRP3YKL211C POL5P39985 1022 aaKnown RBP7.53□□□□□ -1.2
TRP3YKL211C SEC3P33332 1336 aaKnown RBP7.53□□□□□ -1.2
TRP3YKL211C SPT16P32558 1035 aaKnown RBP7.51□□□□□ -1.21
TRP3YKL211C SAS10Q12136 610 aaPredicted RBP7.51□□□□□ -1.21
TRP3YKL211C MVP1P40959 511 aaKnown RBP7.5□□□□□ -1.21
TRP3YKL211C TAF7Q05021 590 aa7.5□□□□□ -1.21
TRP3YKL211C PAT1P25644 796 aaKnown RBP7.49□□□□□ -1.21
TRP3YKL211C GCD11P32481 527 aaKnown RBP7.49□□□□□ -1.21
TRP3YKL211C ESP1Q03018 1630 aa7.49□□□□□ -1.21
TRP3YKL211C NUP170P38181 1502 aa7.49□□□□□ -1.21
TRP3YKL211C RGA2Q06407 1009 aa7.49□□□□□ -1.21
TRP3YKL211C RQC2Q12532 1038 aaKnown RBP7.49□□□□□ -1.21
TRP3YKL211C MYO4P32492 1471 aa7.48□□□□□ -1.21
TRP3YKL211C SMC4Q12267 1418 aa7.48□□□□□ -1.21
TRP3YKL211C STH1P32597 1359 aa7.48□□□□□ -1.21
TRP3YKL211C CAB3P36076 571 aa7.48□□□□□ -1.21
TRP3YKL211C MON2P48563 1636 aaPredicted RBP7.47□□□□□ -1.21
TRP3YKL211C GCR2Q01722 534 aa7.47□□□□□ -1.21
TRP3YKL211C CKB1P43639 278 aa7.46□□□□□ -1.22
TRP3YKL211C RGR1P19263 1082 aa7.44□□□□□ -1.22
TRP3YKL211C YPR109WQ06104 294 aa7.44□□□□□ -1.22
TRP3YKL211C ECM5Q03214 1411 aa7.42□□□□□ -1.22
TRP3YKL211C SCC2Q04002 1493 aa7.42□□□□□ -1.22
TRP3YKL211C BPT1P14772 1559 aa7.42□□□□□ -1.22
TRP3YKL211C SEC2P17065 759 aa7.42□□□□□ -1.22
TRP3YKL211C BRE2P43132 505 aa7.42□□□□□ -1.22
TRP3YKL211C TY1A-DR4O74302 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-HP0C2I4 478 aaKnown RBP7.41□□□□□ -1.22
TRP3YKL211C TY1A-AP0CX57 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-PR1P0CX58 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-ORP0CX59 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-PR2P0CX60 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-DR5P0CX65 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-ER2P0CX66 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-GR3P0CX67 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-LR1P0CX68 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-MR2P0CX69 440 aa7.41□□□□□ -1.22
TRP3YKL211C CST6P40535 587 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-JR2P47099 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-DR1Q03856 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-ML1Q04706 440 aaKnown RBP7.41□□□□□ -1.22
TRP3YKL211C TY1A-BRQ12217 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-NL2Q12470 440 aa7.41□□□□□ -1.22
TRP3YKL211C TY1A-GR2Q12485 440 aa7.41□□□□□ -1.22
TRP3YKL211C EBP2P36049 427 aaKnown RBP7.4□□□□□ -1.22
TRP3YKL211C LAM6Q08001 693 aa7.4□□□□□ -1.22
TRP3YKL211C YPK9Q12697 1472 aa7.4□□□□□ -1.23
TRP3YKL211C DNA2P38859 1522 aa7.39□□□□□ -1.23
TRP3YKL211C PAN1P32521 1480 aa7.39□□□□□ -1.23
TRP3YKL211C YOR1P53049 1477 aa7.39□□□□□ -1.23
TRP3YKL211C SSM4P40318 1319 aa7.39□□□□□ -1.23
TRP3YKL211C RRN7P40992 514 aa7.38□□□□□ -1.23
TRP3YKL211C SWR1Q05471 1514 aa7.38□□□□□ -1.23
TRP3YKL211C PBS2P08018 668 aa7.37□□□□□ -1.23
TRP3YKL211C CLB5P30283 435 aa7.37□□□□□ -1.23
TRP3YKL211C PSE1P32337 1089 aaKnown RBP7.37□□□□□ -1.23
TRP3YKL211C CDC4P07834 779 aa7.36□□□□□ -1.23
TRP3YKL211C BUD4P47136 1447 aa7.36□□□□□ -1.23
TRP3YKL211C AIR1P40507 360 aaKnown RBP7.36□□□□□ -1.23
TRP3YKL211C FRK1Q03002 865 aaPredicted RBP7.36□□□□□ -1.23
TRP3YKL211C RKR1Q04781 1562 aa7.35□□□□□ -1.23
TRP3YKL211C SPT7P35177 1332 aa7.35□□□□□ -1.23
TRP3YKL211C BDP1P46678 594 aa7.35□□□□□ -1.23
TRP3YKL211C HED1Q03937 162 aa7.35□□□□□ -1.23
TRP3YKL211C YPL062WQ02781 134 aa7.34□□□□□ -1.23
TRP3YKL211C SNQ2P32568 1501 aaKnown RBP7.34□□□□□ -1.24
TRP3YKL211C MLP2P40457 1679 aa7.32□□□□□ -1.24
TRP3YKL211C GBP2P25555 427 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
TRP3YKL211C CLA4P48562 842 aa7.31□□□□□ -1.24
TRP3YKL211C MAM3Q12296 706 aa7.3□□□□□ -1.24
TRP3YKL211C KEX2P13134 814 aa7.3□□□□□ -1.24
TRP3YKL211C PRS1P32895 427 aaKnown RBP7.29□□□□□ -1.24
TRP3YKL211C RTT106P40161 455 aa7.29□□□□□ -1.24
TRP3YKL211C RTF1P53064 558 aa7.29□□□□□ -1.24
TRP3YKL211C GEA1P47102 1408 aaPredicted RBP7.28□□□□□ -1.24
TRP3YKL211C PDR10P51533 1564 aa7.27□□□□□ -1.25
TRP3YKL211C GAR1P28007 205 aaKnown RBP7.27□□□□□ -1.25
TRP3YKL211C TSC11P40061 1430 aa7.26□□□□□ -1.25
TRP3YKL211C PEP1P32319 1579 aa7.26□□□□□ -1.25
TRP3YKL211C TOP2P06786 1428 aaKnown RBP7.25□□□□□ -1.25
TRP3YKL211C ERF2Q06551 359 aa7.24□□□□□ -1.25
TRP3YKL211C ATG2P53855 1592 aa7.24□□□□□ -1.25
TRP3YKL211C PDR15Q04182 1529 aaKnown RBP7.24□□□□□ -1.25
TRP3YKL211C DSF2P38213 736 aa7.24□□□□□ -1.25
TRP3YKL211C YNL115CP53925 644 aa7.24□□□□□ -1.25
TRP3YKL211C MOD5P07884 428 aa7.23□□□□□ -1.25
TRP3YKL211C RPO31P04051 1460 aa7.23□□□□□ -1.25
TRP3YKL211C YCF1P39109 1515 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms