RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	TY2B-OR1	Q12113	1770 aa		5.01	□□□□□ -1.61
VID28	YIL017C	TY2B-DR1	Q12472	1770 aa		5.01	□□□□□ -1.61
VID28	YIL017C	TY2B-OR2	Q12501	1770 aa		5.01	□□□□□ -1.61
VID28	YIL017C	SNT2	P53127	1403 aa		5.01	□□□□□ -1.61
VID28	YIL017C	SPC110	P32380	944 aa		5	□□□□□ -1.61
VID28	YIL017C	SMC3	P47037	1230 aa		5	□□□□□ -1.61
VID28	YIL017C	AIM44	Q99299	758 aa		5	□□□□□ -1.61
VID28	YIL017C	IQG1	Q12280	1495 aa		5	□□□□□ -1.61
VID28	YIL017C	PBS2	P08018	668 aa		5	□□□□□ -1.61
VID28	YIL017C	COQ8	P27697	501 aa		5	□□□□□ -1.61
VID28	YIL017C	TIF4632	P39936	914 aa	Known RBP	4.99	□□□□□ -1.61
VID28	YIL017C	VPS27	P40343	622 aa	Known RBP	4.99	□□□□□ -1.61
VID28	YIL017C	TY2B-B	Q12491	1770 aa		4.99	□□□□□ -1.61
VID28	YIL017C	DNF2	Q12675	1612 aa		4.99	□□□□□ -1.61
VID28	YIL017C	VPS24	P36095	224 aa	Known RBP	4.99	□□□□□ -1.61
VID28	YIL017C	HSP82	P02829	709 aa	Known RBP	4.99	□□□□□ -1.61
VID28	YIL017C	MSP1	P28737	362 aa		4.98	□□□□□ -1.61
VID28	YIL017C	PIL1	P53252	339 aa	Known RBP	4.98	□□□□□ -1.61
VID28	YIL017C	YRF1-4	O13559	1382 aa		4.98	□□□□□ -1.61
VID28	YIL017C	YML133C	Q03099	1374 aa		4.98	□□□□□ -1.61
VID28	YIL017C	YLL067C	Q07888	1374 aa		4.98	□□□□□ -1.61
VID28	YIL017C	YLL066C	Q99208	1374 aa		4.98	□□□□□ -1.61
VID28	YIL017C	PCT1	P13259	424 aa		4.98	□□□□□ -1.61
VID28	YIL017C	CTR9	P89105	1077 aa		4.98	□□□□□ -1.61
VID28	YIL017C	PDR12	Q02785	1511 aa		4.97	□□□□□ -1.61
VID28	YIL017C	DEF1	P35732	738 aa	Known RBP	4.97	□□□□□ -1.61
VID28	YIL017C	BYE1	P36106	594 aa		4.97	□□□□□ -1.61
VID28	YIL017C	EDS1	P38073	919 aa		4.96	□□□□□ -1.62
VID28	YIL017C	CWC22	P53333	577 aa	Known RBP	4.96	□□□□□ -1.62
VID28	YIL017C	YNR021W	P53723	404 aa	Known RBP	4.96	□□□□□ -1.62
VID28	YIL017C	STS1	P38637	319 aa		4.96	□□□□□ -1.62
VID28	YIL017C	NMD2	P38798	1089 aa	Known RBP	4.96	□□□□□ -1.62
VID28	YIL017C	NUP42	P49686	430 aa	Known RBP	4.96	□□□□□ -1.62
VID28	YIL017C	FPR4	Q06205	392 aa	Predicted RBP	4.96	□□□□□ -1.62
VID28	YIL017C	KIN1	P13185	1064 aa		4.95	□□□□□ -1.62
VID28	YIL017C	VPS4	P52917	437 aa		4.95	□□□□□ -1.62
VID28	YIL017C	ENV11	P53246	860 aa		4.95	□□□□□ -1.62
VID28	YIL017C	HAP1	P0CE41	1502 aa		4.95	□□□□□ -1.62
VID28	YIL017C	SCT1	P32784	759 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-H	O13535	1793 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-DR5	P0C2I2	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-DR6	P0C2I3	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-LR2	P0C2I5	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-PR2	P0C2J0	1756 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-JR1	P47098	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-ER1	Q03612	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-GR2	Q12269	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-OL	Q12273	1755 aa		4.94	□□□□□ -1.62
VID28	YIL017C	TY1B-PL	Q12414	1755 aa	Known RBP	4.94	□□□□□ -1.62
VID28	YIL017C	RAD9	P14737	1309 aa		4.94	□□□□□ -1.62
VID28	YIL017C	SNF2	P22082	1703 aa		4.94	□□□□□ -1.62
VID28	YIL017C	SRP54	P20424	541 aa	Known RBP	4.93	□□□□□ -1.62
VID28	YIL017C	DIT2	P21595	489 aa		4.93	□□□□□ -1.62
VID28	YIL017C	TCD1	P38756	429 aa		4.93	□□□□□ -1.62
VID28	YIL017C	AIM7	Q12156	149 aa		4.93	□□□□□ -1.62
VID28	YIL017C	NOP14	Q99207	810 aa	Known RBP	4.93	□□□□□ -1.62
VID28	YIL017C	NAP1	P25293	417 aa	Known RBP	4.93	□□□□□ -1.62
VID28	YIL017C	KNS1	P32350	737 aa	Predicted RBP	4.93	□□□□□ -1.62
VID28	YIL017C	YSP2	Q06681	1438 aa		4.92	□□□□□ -1.62
VID28	YIL017C	RNA1	P11745	407 aa	Known RBP	4.92	□□□□□ -1.62
VID28	YIL017C	CIN4	P39110	191 aa		4.92	□□□□□ -1.62
VID28	YIL017C	TGL3	P40308	642 aa		4.92	□□□□□ -1.62
VID28	YIL017C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
VID28	YIL017C	MET5	P47169	1442 aa		4.92	□□□□□ -1.62
VID28	YIL017C	GLC3	P32775	704 aa		4.92	□□□□□ -1.62
VID28	YIL017C	HAP5	Q02516	242 aa		4.92	□□□□□ -1.62
VID28	YIL017C	RVB2	Q12464	471 aa	Known RBP	4.92	□□□□□ -1.62
VID28	YIL017C	VTH1	P40438	1549 aa		4.91	□□□□□ -1.62
VID28	YIL017C	VTH2	P40890	1549 aa		4.91	□□□□□ -1.62
VID28	YIL017C	REF2	P42073	533 aa	Predicted RBP	4.91	□□□□□ -1.62
VID28	YIL017C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
VID28	YIL017C	YOR093C	Q12275	1648 aa		4.91	□□□□□ -1.62
VID28	YIL017C	ARL1	P38116	183 aa	Known RBP	4.91	□□□□□ -1.62
VID28	YIL017C	KRI1	P42846	591 aa	Known RBP	4.91	□□□□□ -1.62
VID28	YIL017C	MAM3	Q12296	706 aa		4.91	□□□□□ -1.62
VID28	YIL017C	CDC25	P04821	1589 aa		4.9	□□□□□ -1.63
VID28	YIL017C	FUN12	P39730	1002 aa	Known RBP	4.9	□□□□□ -1.63
VID28	YIL017C	PDS5	Q04264	1277 aa		4.9	□□□□□ -1.63
VID28	YIL017C	IES2	P40154	320 aa		4.89	□□□□□ -1.63
VID28	YIL017C	DBP1	P24784	617 aa	Known RBP	4.89	□□□□□ -1.63
VID28	YIL017C	MIF2	P35201	549 aa		4.89	□□□□□ -1.63
VID28	YIL017C	TY1B-BR	Q12193	1756 aa		4.88	□□□□□ -1.63
VID28	YIL017C	TY1B-GR3	Q12316	1755 aa		4.88	□□□□□ -1.63
VID28	YIL017C	TY1B-OR	Q92393	1755 aa		4.88	□□□□□ -1.63
VID28	YIL017C	COX6	P00427	148 aa		4.88	□□□□□ -1.63
VID28	YIL017C	SLX5	P32828	619 aa	Known RBP	4.88	□□□□□ -1.63
VID28	YIL017C	GUA1	P38625	525 aa	Known RBP	4.88	□□□□□ -1.63
VID28	YIL017C	TEA1	P47988	759 aa		4.88	□□□□□ -1.63
VID28	YIL017C	SWI3	P32591	825 aa		4.88	□□□□□ -1.63
VID28	YIL017C	RKM3	P38222	552 aa		4.88	□□□□□ -1.63
VID28	YIL017C	TAN1	P53072	289 aa	Predicted RBP	4.88	□□□□□ -1.63
VID28	YIL017C	NOP7	P53261	605 aa	Known RBP	4.88	□□□□□ -1.63
VID28	YIL017C	MSH4	P40965	878 aa	Predicted RBP	4.87	□□□□□ -1.63
VID28	YIL017C	VPS72	Q03388	795 aa		4.87	□□□□□ -1.63
VID28	YIL017C	TY1B-JR2	P47100	1755 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms