RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W NUP42P49686 430 aaKnown RBP6.92□□□□□ -1.3
NMD3YHR170W MYO4P32492 1471 aa6.92□□□□□ -1.3
NMD3YHR170W IES2P40154 320 aa6.91□□□□□ -1.3
NMD3YHR170W AI4P03878 556 aa6.91□□□□□ -1.3
NMD3YHR170W DIT2P21595 489 aa6.91□□□□□ -1.3
NMD3YHR170W PAN1P32521 1480 aa6.9□□□□□ -1.3
NMD3YHR170W PTC4P38089 393 aa6.9□□□□□ -1.31
NMD3YHR170W DAN4P47179 1161 aa6.9□□□□□ -1.31
NMD3YHR170W TY1B-JR2P47100 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-ER2Q03619 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-MR1Q04214 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-MR2Q04670 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-LR1Q12088 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-NL1Q12112 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-GR1Q12141 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-BLQ12490 1755 aa6.89□□□□□ -1.31
NMD3YHR170W RPN1P38764 993 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W SPP41P38904 1435 aa6.89□□□□□ -1.31
NMD3YHR170W DNF1P32660 1571 aa6.89□□□□□ -1.31
NMD3YHR170W RAD54P32863 898 aa6.88□□□□□ -1.31
NMD3YHR170W RPA190P10964 1664 aaKnown RBP6.88□□□□□ -1.31
NMD3YHR170W MLP2P40457 1679 aa6.87□□□□□ -1.31
NMD3YHR170W JIP4Q03361 876 aa6.86□□□□□ -1.31
NMD3YHR170W SNQ2P32568 1501 aaKnown RBP6.86□□□□□ -1.31
NMD3YHR170W LDB19Q12502 818 aa6.86□□□□□ -1.31
NMD3YHR170W VTH1P40438 1549 aa6.86□□□□□ -1.31
NMD3YHR170W VTH2P40890 1549 aa6.86□□□□□ -1.31
NMD3YHR170W YNR021WP53723 404 aaKnown RBP6.85□□□□□ -1.31
NMD3YHR170W SLI15P38283 698 aa6.84□□□□□ -1.31
NMD3YHR170W YNL035CP53962 389 aaKnown RBP6.84□□□□□ -1.31
NMD3YHR170W KIC1P38692 1080 aa6.83□□□□□ -1.32
NMD3YHR170W TSC11P40061 1430 aa6.83□□□□□ -1.32
NMD3YHR170W GLC3P32775 704 aa6.82□□□□□ -1.32
NMD3YHR170W ULS1Q08562 1619 aa6.82□□□□□ -1.32
NMD3YHR170W RTG1P32607 177 aa6.82□□□□□ -1.32
NMD3YHR170W STH1P32597 1359 aa6.82□□□□□ -1.32
NMD3YHR170W NTE1Q04958 1679 aa6.82□□□□□ -1.32
NMD3YHR170W PDR15Q04182 1529 aaKnown RBP6.81□□□□□ -1.32
NMD3YHR170W ORC6P38826 435 aa6.81□□□□□ -1.32
NMD3YHR170W TRM732Q03496 1420 aa6.8□□□□□ -1.32
NMD3YHR170W MID1P41821 548 aa6.8□□□□□ -1.32
NMD3YHR170W RPO21P04050 1733 aaKnown RBP6.8□□□□□ -1.32
NMD3YHR170W SEC61P32915 480 aa6.78□□□□□ -1.32
NMD3YHR170W PML39Q03760 334 aa6.78□□□□□ -1.32
NMD3YHR170W CDC73Q06697 393 aa6.78□□□□□ -1.32
NMD3YHR170W GAP1P19145 602 aaPredicted RBP6.77□□□□□ -1.33
NMD3YHR170W YRF1-1P0CX20 1796 aa6.76□□□□□ -1.33
NMD3YHR170W YRF1-5P0CX21 1796 aa6.76□□□□□ -1.33
NMD3YHR170W YRF1-8P0CX22 1796 aa6.76□□□□□ -1.33
NMD3YHR170W PSE1P32337 1089 aaKnown RBP6.76□□□□□ -1.33
NMD3YHR170W AIM7Q12156 149 aa6.76□□□□□ -1.33
NMD3YHR170W KIN1P13185 1064 aa6.75□□□□□ -1.33
NMD3YHR170W FKH1P40466 484 aa6.75□□□□□ -1.33
NMD3YHR170W NCR1Q12200 1170 aa6.75□□□□□ -1.33
NMD3YHR170W SNT2P53127 1403 aa6.75□□□□□ -1.33
NMD3YHR170W RGR1P19263 1082 aa6.74□□□□□ -1.33
NMD3YHR170W NUP159P40477 1460 aa6.73□□□□□ -1.33
NMD3YHR170W MVP1P40959 511 aaKnown RBP6.73□□□□□ -1.33
NMD3YHR170W ATF2P53296 535 aa6.72□□□□□ -1.33
NMD3YHR170W MPC54Q08550 464 aa6.72□□□□□ -1.33
NMD3YHR170W AIR2Q12476 344 aaKnown RBP6.72□□□□□ -1.33
NMD3YHR170W GEA1P47102 1408 aaPredicted RBP6.71□□□□□ -1.34
NMD3YHR170W YDL129WQ07555 291 aa6.7□□□□□ -1.34
NMD3YHR170W TY3B-GQ99315 1547 aa6.7□□□□□ -1.34
NMD3YHR170W PEX29Q03370 554 aa6.69□□□□□ -1.34
NMD3YHR170W YDR344CQ05510 147 aa6.69□□□□□ -1.34
NMD3YHR170W DPL1Q05567 589 aa6.69□□□□□ -1.34
NMD3YHR170W MET5P47169 1442 aa6.69□□□□□ -1.34
NMD3YHR170W CSC1Q06538 782 aa6.69□□□□□ -1.34
NMD3YHR170W IRC20Q06554 1556 aa6.68□□□□□ -1.34
NMD3YHR170W YBT1P32386 1661 aa6.68□□□□□ -1.34
NMD3YHR170W SPO14P36126 1683 aa6.67□□□□□ -1.34
NMD3YHR170W RTT106P40161 455 aa6.67□□□□□ -1.34
NMD3YHR170W GEA2P39993 1459 aaKnown RBP6.67□□□□□ -1.34
NMD3YHR170W TFG1P41895 735 aaPredicted RBP6.66□□□□□ -1.34
NMD3YHR170W NMA111P53920 997 aa6.66□□□□□ -1.34
NMD3YHR170W DMA2P53924 522 aa6.66□□□□□ -1.34
NMD3YHR170W YPR109WQ06104 294 aa6.66□□□□□ -1.34
NMD3YHR170W SAP30P38429 201 aa6.65□□□□□ -1.34
NMD3YHR170W GUA1P38625 525 aaKnown RBP6.65□□□□□ -1.34
NMD3YHR170W RPP1BP10622 106 aaKnown RBP6.65□□□□□ -1.35
NMD3YHR170W TEA1P47988 759 aa6.65□□□□□ -1.35
NMD3YHR170W TFB4Q12004 338 aa6.65□□□□□ -1.35
NMD3YHR170W VPS15P22219 1454 aa6.64□□□□□ -1.35
NMD3YHR170W TUM1Q08686 304 aaKnown RBP6.63□□□□□ -1.35
NMD3YHR170W ISU2Q12056 156 aa6.63□□□□□ -1.35
NMD3YHR170W YRR1Q12172 810 aa6.61□□□□□ -1.35
NMD3YHR170W GDB1Q06625 1536 aa6.61□□□□□ -1.35
NMD3YHR170W ARH1P48360 493 aa6.61□□□□□ -1.35
NMD3YHR170W PEX21P50091 288 aa6.61□□□□□ -1.35
NMD3YHR170W NIS1P53939 407 aa6.61□□□□□ -1.35
NMD3YHR170W PDR12Q02785 1511 aa6.61□□□□□ -1.35
NMD3YHR170W PDR10P51533 1564 aa6.6□□□□□ -1.35
NMD3YHR170W IKI3Q06706 1349 aaKnown RBP6.6□□□□□ -1.35
NMD3YHR170W MET10P39692 1035 aa6.6□□□□□ -1.35
NMD3YHR170W BUD3P25558 1636 aa6.59□□□□□ -1.35
NMD3YHR170W NUP170P38181 1502 aa6.59□□□□□ -1.35
NMD3YHR170W CLB5P30283 435 aa6.59□□□□□ -1.35
NMD3YHR170W NUP157P40064 1391 aaKnown RBP6.58□□□□□ -1.36
NMD3YHR170W PDR1P12383 1068 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms