RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W PPH3P32345 308 aa14.63□□□□□ -0.07
TRM5YHR070W PSK1P31374 1356 aa14.62□□□□□ -0.07
TRM5YHR070W SPT7P35177 1332 aa14.61□□□□□ -0.07
TRM5YHR070W CPS1P27614 576 aa14.61□□□□□ -0.07
TRM5YHR070W MLP1Q02455 1875 aaKnown RBP14.6□□□□□ -0.07
TRM5YHR070W YFR006WP43590 535 aa14.6□□□□□ -0.07
TRM5YHR070W FKH1P40466 484 aa14.59□□□□□ -0.07
TRM5YHR070W YML133CQ03099 1374 aa14.58□□□□□ -0.07
TRM5YHR070W YLL067CQ07888 1374 aa14.58□□□□□ -0.07
TRM5YHR070W YLL066CQ99208 1374 aa14.58□□□□□ -0.07
TRM5YHR070W PSD2P53037 1138 aaKnown RBP14.57□□□□□ -0.08
TRM5YHR070W RTG3P38165 486 aa14.56□□□□□ -0.08
TRM5YHR070W NST1P53935 1240 aa14.51□□□□□ -0.09
TRM5YHR070W LEU2P04173 364 aaPredicted RBP14.46□□□□□ -0.09
TRM5YHR070W LEU3P08638 886 aa14.46□□□□□ -0.09
TRM5YHR070W ADE6P38972 1358 aaKnown RBP14.46□□□□□ -0.09
TRM5YHR070W MTR4P47047 1073 aaKnown RBP14.44□□□□□ -0.1
TRM5YHR070W ENP1P38333 483 aaKnown RBP14.43□□□□□ -0.1
TRM5YHR070W TY4B-HP0C2J7 1802 aa14.42□□□□□ -0.1
TRM5YHR070W TY4B-JP47024 1803 aa14.42□□□□□ -0.1
TRM5YHR070W PRP43P53131 767 aaKnown RBP14.4□□□□□ -0.1
TRM5YHR070W NSR1P27476 414 aaKnown RBP RIP-Chip data14.39□□□□□ -0.11not detected
TRM5YHR070W PTP3P40048 928 aa14.39□□□□□ -0.11
TRM5YHR070W YEF3P16521 1044 aaKnown RBP14.38□□□□□ -0.11
TRM5YHR070W RPS24AP0CX31 135 aaKnown RBP14.35□□□□□ -0.11
TRM5YHR070W RPS24BP0CX32 135 aaKnown RBP14.35□□□□□ -0.11
TRM5YHR070W PDI1P17967 522 aaKnown RBP14.35□□□□□ -0.11
TRM5YHR070W CSE4P36012 229 aa14.35□□□□□ -0.11
TRM5YHR070W TAP42Q04372 366 aa14.34□□□□□ -0.11
TRM5YHR070W TRK1P12685 1235 aa14.33□□□□□ -0.12
TRM5YHR070W AUS1Q08409 1394 aa14.31□□□□□ -0.12
TRM5YHR070W RRP5Q05022 1729 aaKnown RBP14.29□□□□□ -0.12
TRM5YHR070W RTF1P53064 558 aa14.29□□□□□ -0.12
TRM5YHR070W HIM1Q06674 414 aa14.28□□□□□ -0.12
TRM5YHR070W GRX4P32642 244 aa14.26□□□□□ -0.13
TRM5YHR070W KAR2P16474 682 aaKnown RBP14.25□□□□□ -0.13
TRM5YHR070W PRP5P21372 849 aaPredicted RBP14.25□□□□□ -0.13
TRM5YHR070W PRP45P28004 379 aaPredicted RBP14.25□□□□□ -0.13
TRM5YHR070W YIL177CP40434 1758 aa14.25□□□□□ -0.13
TRM5YHR070W YJL225CP40889 1758 aa14.25□□□□□ -0.13
TRM5YHR070W IOC4Q04213 475 aa14.24□□□□□ -0.13
TRM5YHR070W GAS4Q08271 471 aa14.24□□□□□ -0.13
TRM5YHR070W YRF1-2P40105 1681 aa14.23□□□□□ -0.13
TRM5YHR070W DPS1P04802 557 aaKnown RBP14.21□□□□□ -0.13
TRM5YHR070W MSB3P48566 633 aaPredicted RBP14.19□□□□□ -0.14
TRM5YHR070W REB1P21538 810 aa14.18□□□□□ -0.14
TRM5YHR070W RRP46P53256 223 aaPredicted RBP14.18□□□□□ -0.14
TRM5YHR070W SNF2P22082 1703 aa14.18□□□□□ -0.14
TRM5YHR070W SLM3Q12093 417 aa14.17□□□□□ -0.14
TRM5YHR070W PRS1P32895 427 aaKnown RBP14.16□□□□□ -0.14
TRM5YHR070W YAH1Q12184 172 aaKnown RBP14.16□□□□□ -0.14
TRM5YHR070W ENT1Q12518 454 aa14.15□□□□□ -0.14
TRM5YHR070W RPO41P13433 1351 aaKnown RBP14.15□□□□□ -0.14
TRM5YHR070W PAP2P53632 584 aaKnown RBP14.14□□□□□ -0.15
TRM5YHR070W APP1P53933 587 aa14.14□□□□□ -0.15
TRM5YHR070W URB1P34241 1764 aaKnown RBP14.14□□□□□ -0.15
TRM5YHR070W FKS3Q04952 1785 aa14.12□□□□□ -0.15
TRM5YHR070W YDL144CQ07589 356 aa14.1□□□□□ -0.15
TRM5YHR070W TCB1Q12466 1186 aa14.1□□□□□ -0.15
TRM5YHR070W APC1P53886 1748 aa14.09□□□□□ -0.15
TRM5YHR070W RTR1P40084 226 aaPredicted RBP14.09□□□□□ -0.15
TRM5YHR070W ENV9Q08651 330 aa14.09□□□□□ -0.15
TRM5YHR070W RPP0P05317 312 aaKnown RBP14.08□□□□□ -0.16
TRM5YHR070W BUB1P41695 1021 aaKnown RBP RIP-Chip data14.07□□□□□ -0.16not detected
TRM5YHR070W MPP10P47083 593 aaKnown RBP14.06□□□□□ -0.16
TRM5YHR070W RSF2P46974 1380 aa14.06□□□□□ -0.16
TRM5YHR070W XKS1P42826 600 aa14.05□□□□□ -0.16
TRM5YHR070W PRD1P25375 712 aa14.04□□□□□ -0.16
TRM5YHR070W VPS27P40343 622 aaKnown RBP14.04□□□□□ -0.16
TRM5YHR070W YRF1-4O13559 1382 aa14.03□□□□□ -0.16
TRM5YHR070W AKL1P38080 1108 aaKnown RBP14.03□□□□□ -0.16
TRM5YHR070W DSD1P53095 428 aa14.01□□□□□ -0.17
TRM5YHR070W CDC45Q08032 650 aa14□□□□□ -0.17
TRM5YHR070W YRF1-3P0CX14 1859 aa14□□□□□ -0.17
TRM5YHR070W YRF1-7P0CX15 1859 aa14□□□□□ -0.17
TRM5YHR070W YRF1-6P53819 1859 aa14□□□□□ -0.17
TRM5YHR070W THI22Q06490 572 aa14□□□□□ -0.17
TRM5YHR070W RCR1P38212 213 aa13.98□□□□□ -0.17
TRM5YHR070W IES2P40154 320 aa13.98□□□□□ -0.17
TRM5YHR070W IMH1Q06704 911 aaKnown RBP13.98□□□□□ -0.17
TRM5YHR070W SIR4P11978 1358 aa13.98□□□□□ -0.17
TRM5YHR070W SUI2P20459 304 aaKnown RBP13.97□□□□□ -0.17
TRM5YHR070W HSP104P31539 908 aaKnown RBP13.95□□□□□ -0.18
TRM5YHR070W SAP155P43612 1002 aa13.95□□□□□ -0.18
TRM5YHR070W RVB2Q12464 471 aaKnown RBP13.95□□□□□ -0.18
TRM5YHR070W NTH2P35172 780 aa13.93□□□□□ -0.18
TRM5YHR070W HEF3P53978 1044 aaKnown RBP13.93□□□□□ -0.18
TRM5YHR070W TPD3P31383 635 aa13.91□□□□□ -0.18
TRM5YHR070W CTF4Q01454 927 aa13.91□□□□□ -0.18
TRM5YHR070W RTT109Q07794 436 aa13.91□□□□□ -0.18
TRM5YHR070W YIL055CP40523 627 aaKnown RBP13.9□□□□□ -0.18
TRM5YHR070W YNL050CP53952 270 aa13.9□□□□□ -0.19
TRM5YHR070W YKL133CP36066 463 aa13.88□□□□□ -0.19
TRM5YHR070W AOS1Q06624 347 aa13.88□□□□□ -0.19
TRM5YHR070W INP54Q08227 384 aaKnown RBP13.88□□□□□ -0.19
TRM5YHR070W YRB30P53107 440 aaPredicted RBP13.87□□□□□ -0.19
TRM5YHR070W ROM2P51862 1356 aaKnown RBP13.86□□□□□ -0.19
TRM5YHR070W ADE16P54113 591 aaKnown RBP13.85□□□□□ -0.19
TRM5YHR070W MEC3Q02574 474 aa13.85□□□□□ -0.19
TRM5YHR070W NUP145P49687 1317 aa13.84□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms