RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	NAP1	P25293	417 aa	Known RBP	8.32	□□□□□ -1.08
RSC30	YHR056C	LEU3	P08638	886 aa		8.32	□□□□□ -1.08
RSC30	YHR056C	URB1	P34241	1764 aa	Known RBP	8.31	□□□□□ -1.08
RSC30	YHR056C	YEF3	P16521	1044 aa	Known RBP	8.31	□□□□□ -1.08
RSC30	YHR056C	RAD9	P14737	1309 aa		8.31	□□□□□ -1.08
RSC30	YHR056C	IKI3	Q06706	1349 aa	Known RBP	8.3	□□□□□ -1.08
RSC30	YHR056C	PAF1	P38351	445 aa		8.29	□□□□□ -1.08
RSC30	YHR056C	CAB1	Q04430	367 aa		8.28	□□□□□ -1.08
RSC30	YHR056C	RTC1	Q08281	1341 aa		8.28	□□□□□ -1.08
RSC30	YHR056C	PRP45	P28004	379 aa	Predicted RBP	8.27	□□□□□ -1.08
RSC30	YHR056C	SSA2	P10592	639 aa	Known RBP	8.27	□□□□□ -1.09
RSC30	YHR056C	RPN11	P43588	306 aa	Known RBP	8.26	□□□□□ -1.09
RSC30	YHR056C	TAF5	P38129	798 aa		8.25	□□□□□ -1.09
RSC30	YHR056C	PSK1	P31374	1356 aa		8.24	□□□□□ -1.09
RSC30	YHR056C	YJL181W	P46987	611 aa		8.24	□□□□□ -1.09
RSC30	YHR056C	PRP5	P21372	849 aa	Predicted RBP	8.24	□□□□□ -1.09
RSC30	YHR056C	RRD1	P40454	393 aa	Known RBP	8.24	□□□□□ -1.09
RSC30	YHR056C	CPS1	P27614	576 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	SPT7	P35177	1332 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	TY4B-H	P0C2J7	1802 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	TY4B-J	P47024	1803 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	IES2	P40154	320 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	DOT5	P40553	215 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	RSF2	P46974	1380 aa		8.22	□□□□□ -1.09
RSC30	YHR056C	PRP40	P33203	583 aa	Known RBP	8.21	□□□□□ -1.09
RSC30	YHR056C	FKS3	Q04952	1785 aa		8.21	□□□□□ -1.1
RSC30	YHR056C	NPR2	P39923	615 aa		8.19	□□□□□ -1.1
RSC30	YHR056C	LAM6	Q08001	693 aa		8.19	□□□□□ -1.1
RSC30	YHR056C	ADE6	P38972	1358 aa	Known RBP	8.19	□□□□□ -1.1
RSC30	YHR056C	BFR2	Q06631	534 aa	Known RBP	8.18	□□□□□ -1.1
RSC30	YHR056C	FOX2	Q02207	900 aa	Known RBP	8.17	□□□□□ -1.1
RSC30	YHR056C	TCB1	Q12466	1186 aa		8.16	□□□□□ -1.1
RSC30	YHR056C	CTH1	P47976	325 aa		8.15	□□□□□ -1.1
RSC30	YHR056C	LYS4	P49367	693 aa	Predicted RBP	8.15	□□□□□ -1.1
RSC30	YHR056C	SSM4	P40318	1319 aa		8.13	□□□□□ -1.11
RSC30	YHR056C	YRF1-3	P0CX14	1859 aa		8.13	□□□□□ -1.11
RSC30	YHR056C	YRF1-7	P0CX15	1859 aa		8.13	□□□□□ -1.11
RSC30	YHR056C	YRF1-6	P53819	1859 aa		8.13	□□□□□ -1.11
RSC30	YHR056C	BDF1	P35817	686 aa		8.12	□□□□□ -1.11
RSC30	YHR056C	SNF2	P22082	1703 aa		8.12	□□□□□ -1.11
RSC30	YHR056C	MSB3	P48566	633 aa	Predicted RBP	8.11	□□□□□ -1.11
RSC30	YHR056C	ALD3	P54114	506 aa		8.11	□□□□□ -1.11
RSC30	YHR056C	ESL2	P36168	1195 aa		8.09	□□□□□ -1.11
RSC30	YHR056C	PRP43	P53131	767 aa	Known RBP	8.09	□□□□□ -1.11
RSC30	YHR056C	SLM3	Q12093	417 aa		8.09	□□□□□ -1.11
RSC30	YHR056C	RCM1	P53972	490 aa		8.07	□□□□□ -1.12
RSC30	YHR056C	YKR075C	P36155	307 aa		8.06	□□□□□ -1.12
RSC30	YHR056C	YKL133C	P36066	463 aa		8.05	□□□□□ -1.12
RSC30	YHR056C	ENP1	P38333	483 aa	Known RBP	8.05	□□□□□ -1.12
RSC30	YHR056C	TAF8	Q03750	510 aa		8.05	□□□□□ -1.12
RSC30	YHR056C	YLR419W	Q06698	1435 aa	Known RBP	8.04	□□□□□ -1.12
RSC30	YHR056C	NOP7	P53261	605 aa	Known RBP	8.04	□□□□□ -1.12
RSC30	YHR056C	PEX21	P50091	288 aa		8.03	□□□□□ -1.12
RSC30	YHR056C	APC1	P53886	1748 aa		8.03	□□□□□ -1.12
RSC30	YHR056C	COB	P00163	385 aa		8.02	□□□□□ -1.13
RSC30	YHR056C	PPH3	P32345	308 aa		8.02	□□□□□ -1.13
RSC30	YHR056C	SAP155	P43612	1002 aa		8.01	□□□□□ -1.13
RSC30	YHR056C	MEC3	Q02574	474 aa		8.01	□□□□□ -1.13
RSC30	YHR056C	MTR4	P47047	1073 aa	Known RBP	8	□□□□□ -1.13
RSC30	YHR056C	RPG1	P38249	964 aa	Known RBP	7.99	□□□□□ -1.13
RSC30	YHR056C	YLL066C	Q99208	1374 aa		7.99	□□□□□ -1.13
RSC30	YHR056C	SCT1	P32784	759 aa		7.98	□□□□□ -1.13
RSC30	YHR056C	UTP22	P53254	1237 aa	Predicted RBP	7.98	□□□□□ -1.13
RSC30	YHR056C	CTT1	P06115	562 aa		7.97	□□□□□ -1.13
RSC30	YHR056C	XKS1	P42826	600 aa		7.97	□□□□□ -1.13
RSC30	YHR056C	YRF1-4	O13559	1382 aa		7.97	□□□□□ -1.13
RSC30	YHR056C	PUS5	Q06244	254 aa		7.96	□□□□□ -1.13
RSC30	YHR056C	BUG1	Q12191	341 aa		7.96	□□□□□ -1.13
RSC30	YHR056C	MSB4	Q12317	492 aa		7.96	□□□□□ -1.13
RSC30	YHR056C	SIR4	P11978	1358 aa		7.96	□□□□□ -1.14
RSC30	YHR056C	RPS9B	P05755	195 aa	Known RBP	7.96	□□□□□ -1.14
RSC30	YHR056C	LEU2	P04173	364 aa	Predicted RBP	7.95	□□□□□ -1.14
RSC30	YHR056C	MHP1	P43638	1398 aa		7.95	□□□□□ -1.14
RSC30	YHR056C	RAD4	P14736	754 aa		7.94	□□□□□ -1.14
RSC30	YHR056C	CHZ1	P40019	153 aa	Predicted RBP	7.94	□□□□□ -1.14
RSC30	YHR056C	CSE4	P36012	229 aa		7.93	□□□□□ -1.14
RSC30	YHR056C	TOS1	P38288	455 aa		7.93	□□□□□ -1.14
RSC30	YHR056C	RIM15	P43565	1770 aa		7.92	□□□□□ -1.14
RSC30	YHR056C	SSA4	P22202	642 aa	Known RBP	7.92	□□□□□ -1.14
RSC30	YHR056C	YER156C	P40093	338 aa	Known RBP	7.91	□□□□□ -1.14
RSC30	YHR056C	YKL222C	P35995	705 aa		7.91	□□□□□ -1.14
RSC30	YHR056C	EAF6	P47128	113 aa		7.91	□□□□□ -1.14
RSC30	YHR056C	RRT14	P40470	206 aa		7.9	□□□□□ -1.14
RSC30	YHR056C	MSN5	P52918	1224 aa		7.9	□□□□□ -1.15
RSC30	YHR056C	YIL177C	P40434	1758 aa		7.88	□□□□□ -1.15
RSC30	YHR056C	YJL225C	P40889	1758 aa		7.88	□□□□□ -1.15
RSC30	YHR056C	ERT1	P38140	529 aa		7.88	□□□□□ -1.15
RSC30	YHR056C	GRX1	P25373	110 aa	Known RBP	7.87	□□□□□ -1.15
RSC30	YHR056C	FPK1	P53739	893 aa		7.87	□□□□□ -1.15
RSC30	YHR056C	SPE2	P21182	396 aa		7.86	□□□□□ -1.15
RSC30	YHR056C	RPS24A	P0CX31	135 aa	Known RBP	7.86	□□□□□ -1.15
RSC30	YHR056C	RPS24B	P0CX32	135 aa	Known RBP	7.86	□□□□□ -1.15
RSC30	YHR056C	GRE2	Q12068	342 aa	Known RBP	7.85	□□□□□ -1.15
RSC30	YHR056C	POM152	P39685	1337 aa		7.84	□□□□□ -1.15
RSC30	YHR056C	FRK1	Q03002	865 aa	Predicted RBP	7.83	□□□□□ -1.16
RSC30	YHR056C	HPC2	Q01448	625 aa		7.82	□□□□□ -1.16
RSC30	YHR056C	ATG13	Q06628	738 aa		7.82	□□□□□ -1.16
RSC30	YHR056C	SQS1	P53866	767 aa	Known RBP	7.82	□□□□□ -1.16
RSC30	YHR056C	RPO41	P13433	1351 aa	Known RBP	7.81	□□□□□ -1.16
RSC30	YHR056C	NYV1	Q12255	253 aa		7.81	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms