RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C RRP5Q05022 1729 aaKnown RBP10.5□□□□□ -0.73
PUP2YGR253C YRF1-2P40105 1681 aa10.49□□□□□ -0.73
PUP2YGR253C PRP45P28004 379 aaPredicted RBP10.47□□□□□ -0.73
PUP2YGR253C TAF5P38129 798 aa10.46□□□□□ -0.73
PUP2YGR253C NAP1P25293 417 aaKnown RBP10.44□□□□□ -0.74
PUP2YGR253C LEU3P08638 886 aa10.41□□□□□ -0.74
PUP2YGR253C CPS1P27614 576 aa10.41□□□□□ -0.74
PUP2YGR253C NOP7P53261 605 aaKnown RBP10.41□□□□□ -0.74
PUP2YGR253C RCM1P53972 490 aa10.4□□□□□ -0.74
PUP2YGR253C UBP1P25037 809 aa10.39□□□□□ -0.75
PUP2YGR253C TAF8Q03750 510 aa10.39□□□□□ -0.75
PUP2YGR253C PRP5P21372 849 aaPredicted RBP10.37□□□□□ -0.75
PUP2YGR253C TY4B-HP0C2J7 1802 aa10.35□□□□□ -0.75
PUP2YGR253C TY4B-JP47024 1803 aa10.35□□□□□ -0.75
PUP2YGR253C PPH3P32345 308 aa10.34□□□□□ -0.75
PUP2YGR253C ESL2P36168 1195 aa10.34□□□□□ -0.75
PUP2YGR253C RPN11P43588 306 aaKnown RBP10.34□□□□□ -0.75
PUP2YGR253C YBL086CP38177 466 aa10.32□□□□□ -0.76
PUP2YGR253C URB1P34241 1764 aaKnown RBP10.31□□□□□ -0.76
PUP2YGR253C MSB3P48566 633 aaPredicted RBP10.31□□□□□ -0.76
PUP2YGR253C DOT5P40553 215 aa10.3□□□□□ -0.76
PUP2YGR253C IES2P40154 320 aa10.29□□□□□ -0.76
PUP2YGR253C PSK1P31374 1356 aa10.28□□□□□ -0.76
PUP2YGR253C YCK3P39962 524 aa10.28□□□□□ -0.76
PUP2YGR253C UGA2P38067 497 aa10.26□□□□□ -0.77
PUP2YGR253C ADE6P38972 1358 aaKnown RBP10.26□□□□□ -0.77
PUP2YGR253C TCB1Q12466 1186 aa10.25□□□□□ -0.77
PUP2YGR253C NPR2P39923 615 aa10.24□□□□□ -0.77
PUP2YGR253C GTT3P39996 337 aa10.24□□□□□ -0.77
PUP2YGR253C YJL181WP46987 611 aa10.24□□□□□ -0.77
PUP2YGR253C FOX2Q02207 900 aaKnown RBP10.24□□□□□ -0.77
PUP2YGR253C LYS4P49367 693 aaPredicted RBP10.23□□□□□ -0.77
PUP2YGR253C FKS3Q04952 1785 aa10.23□□□□□ -0.77
PUP2YGR253C ROM2P51862 1356 aaKnown RBP10.23□□□□□ -0.77
PUP2YGR253C HAA1Q12753 694 aaKnown RBP10.22□□□□□ -0.77
PUP2YGR253C EDE1P34216 1381 aa10.22□□□□□ -0.77
PUP2YGR253C ALD2P47771 506 aa10.21□□□□□ -0.77
PUP2YGR253C RSF2P46974 1380 aa10.21□□□□□ -0.78
PUP2YGR253C SLM3Q12093 417 aa10.2□□□□□ -0.78
PUP2YGR253C SSA1P10591 642 aaKnown RBP10.19□□□□□ -0.78
PUP2YGR253C SSA2P10592 639 aaKnown RBP10.19□□□□□ -0.78
PUP2YGR253C YEF3P16521 1044 aaKnown RBP10.18□□□□□ -0.78
PUP2YGR253C YRF1-3P0CX14 1859 aa10.17□□□□□ -0.78
PUP2YGR253C YRF1-7P0CX15 1859 aa10.17□□□□□ -0.78
PUP2YGR253C YRF1-6P53819 1859 aa10.17□□□□□ -0.78
PUP2YGR253C SPE2P21182 396 aa10.17□□□□□ -0.78
PUP2YGR253C PRP40P33203 583 aaKnown RBP10.17□□□□□ -0.78
PUP2YGR253C CSE4P36012 229 aa10.17□□□□□ -0.78
PUP2YGR253C LAM6Q08001 693 aa10.17□□□□□ -0.78
PUP2YGR253C YKL133CP36066 463 aa10.15□□□□□ -0.78
PUP2YGR253C ENP1P38333 483 aaKnown RBP10.15□□□□□ -0.78
PUP2YGR253C RPS24AP0CX31 135 aaKnown RBP10.14□□□□□ -0.79
PUP2YGR253C RPS24BP0CX32 135 aaKnown RBP10.14□□□□□ -0.79
PUP2YGR253C CTH1P47976 325 aa10.14□□□□□ -0.79
PUP2YGR253C KIP3P53086 805 aaKnown RBP10.14□□□□□ -0.79
PUP2YGR253C PRP43P53131 767 aaKnown RBP10.14□□□□□ -0.79
PUP2YGR253C LEU2P04173 364 aaPredicted RBP10.13□□□□□ -0.79
PUP2YGR253C COBP00163 385 aa10.12□□□□□ -0.79
PUP2YGR253C MTR4P47047 1073 aaKnown RBP10.12□□□□□ -0.79
PUP2YGR253C XKS1P42826 600 aa10.11□□□□□ -0.79
PUP2YGR253C YKR075CP36155 307 aa10.1□□□□□ -0.79
PUP2YGR253C ISW2Q08773 1120 aa10.1□□□□□ -0.79
PUP2YGR253C CHZ1P40019 153 aaPredicted RBP10.09□□□□□ -0.79
PUP2YGR253C YRF1-4O13559 1382 aa10.09□□□□□ -0.79
PUP2YGR253C YIL177CP40434 1758 aa10.06□□□□□ -0.8
PUP2YGR253C YJL225CP40889 1758 aa10.06□□□□□ -0.8
PUP2YGR253C APC1P53886 1748 aa10.04□□□□□ -0.8
PUP2YGR253C ORC1P54784 914 aaPredicted RBP10.02□□□□□ -0.81
PUP2YGR253C RPG1P38249 964 aaKnown RBP10□□□□□ -0.81
PUP2YGR253C FRK1Q03002 865 aaPredicted RBP10□□□□□ -0.81
PUP2YGR253C SPT7P35177 1332 aa10□□□□□ -0.81
PUP2YGR253C BDF1P35817 686 aa9.99□□□□□ -0.81
PUP2YGR253C ALD3P54114 506 aa9.99□□□□□ -0.81
PUP2YGR253C MEC3Q02574 474 aa9.99□□□□□ -0.81
PUP2YGR253C YLR419WQ06698 1435 aaKnown RBP9.99□□□□□ -0.81
PUP2YGR253C YML133CQ03099 1374 aa9.98□□□□□ -0.81
PUP2YGR253C YLL067CQ07888 1374 aa9.98□□□□□ -0.81
PUP2YGR253C YLL066CQ99208 1374 aa9.98□□□□□ -0.81
PUP2YGR253C SNF2P22082 1703 aa9.97□□□□□ -0.81
PUP2YGR253C DPS1P04802 557 aaKnown RBP9.97□□□□□ -0.81
PUP2YGR253C GAS4Q08271 471 aa9.97□□□□□ -0.81
PUP2YGR253C RCR1P38212 213 aa9.96□□□□□ -0.82
PUP2YGR253C ADE16P54113 591 aaKnown RBP9.95□□□□□ -0.82
PUP2YGR253C MSB4Q12317 492 aa9.94□□□□□ -0.82
PUP2YGR253C RRD1P40454 393 aaKnown RBP9.93□□□□□ -0.82
PUP2YGR253C SIR4P11978 1358 aa9.92□□□□□ -0.82
PUP2YGR253C EAF6P47128 113 aa9.92□□□□□ -0.82
PUP2YGR253C SCT1P32784 759 aa9.91□□□□□ -0.82
PUP2YGR253C RTF1P53064 558 aa9.91□□□□□ -0.82
PUP2YGR253C ATG13Q06628 738 aa9.91□□□□□ -0.82
PUP2YGR253C BUG1Q12191 341 aa9.91□□□□□ -0.82
PUP2YGR253C RIM15P43565 1770 aa9.9□□□□□ -0.82
PUP2YGR253C RPO41P13433 1351 aaKnown RBP9.89□□□□□ -0.83
PUP2YGR253C PDI1P17967 522 aaKnown RBP9.89□□□□□ -0.83
PUP2YGR253C SAP155P43612 1002 aa9.89□□□□□ -0.83
PUP2YGR253C FKH1P40466 484 aa9.87□□□□□ -0.83
PUP2YGR253C GRE2Q12068 342 aaKnown RBP9.87□□□□□ -0.83
PUP2YGR253C TSR3Q12094 313 aaKnown RBP9.87□□□□□ -0.83
PUP2YGR253C TOS1P38288 455 aa9.86□□□□□ -0.83
PUP2YGR253C RAD4P14736 754 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms