RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W VPS27P40343 622 aaKnown RBP11.6□□□□□ -0.55
VPS62YGR141W CDC45Q08032 650 aa11.6□□□□□ -0.55
VPS62YGR141W AVT3P36062 692 aa11.58□□□□□ -0.56
VPS62YGR141W MLP1Q02455 1875 aaKnown RBP11.57□□□□□ -0.56
VPS62YGR141W YRB30P53107 440 aaPredicted RBP11.56□□□□□ -0.56
VPS62YGR141W MAK10Q02197 733 aa11.56□□□□□ -0.56
VPS62YGR141W DNF3Q12674 1656 aa11.56□□□□□ -0.56
VPS62YGR141W KRE5P22023 1365 aa11.56□□□□□ -0.56
VPS62YGR141W PSK1P31374 1356 aa11.56□□□□□ -0.56
VPS62YGR141W RIA1P53893 1110 aa11.55□□□□□ -0.56
VPS62YGR141W YEF3P16521 1044 aaKnown RBP11.51□□□□□ -0.57
VPS62YGR141W RCM1P53972 490 aa11.51□□□□□ -0.57
VPS62YGR141W TAP42Q04372 366 aa11.51□□□□□ -0.57
VPS62YGR141W YML133CQ03099 1374 aa11.5□□□□□ -0.57
VPS62YGR141W YLL067CQ07888 1374 aa11.5□□□□□ -0.57
VPS62YGR141W YLL066CQ99208 1374 aa11.5□□□□□ -0.57
VPS62YGR141W LEU2P04173 364 aaPredicted RBP11.5□□□□□ -0.57
VPS62YGR141W YDL144CQ07589 356 aa11.5□□□□□ -0.57
VPS62YGR141W TRK1P12685 1235 aa11.49□□□□□ -0.57
VPS62YGR141W PDI1P17967 522 aaKnown RBP11.49□□□□□ -0.57
VPS62YGR141W CPS1P27614 576 aa11.47□□□□□ -0.57
VPS62YGR141W MTR4P47047 1073 aaKnown RBP11.47□□□□□ -0.57
VPS62YGR141W ABP1P15891 592 aaKnown RBP11.46□□□□□ -0.57
VPS62YGR141W KAR2P16474 682 aaKnown RBP11.46□□□□□ -0.57
VPS62YGR141W PPH3P32345 308 aa11.46□□□□□ -0.57
VPS62YGR141W GRX4P32642 244 aa11.46□□□□□ -0.57
VPS62YGR141W RTF1P53064 558 aa11.46□□□□□ -0.57
VPS62YGR141W YNR029CP53729 429 aaKnown RBP11.46□□□□□ -0.57
VPS62YGR141W RVB2Q12464 471 aaKnown RBP11.46□□□□□ -0.57
VPS62YGR141W FPR3P38911 411 aaKnown RBP11.43□□□□□ -0.58
VPS62YGR141W RTR1P40084 226 aaPredicted RBP11.42□□□□□ -0.58
VPS62YGR141W TY1B-NL2Q99337 1749 aaKnown RBP11.4□□□□□ -0.58
VPS62YGR141W MPP10P47083 593 aaKnown RBP11.39□□□□□ -0.59
VPS62YGR141W YMR196WQ04336 1088 aa11.38□□□□□ -0.59
VPS62YGR141W SUI2P20459 304 aaKnown RBP11.37□□□□□ -0.59
VPS62YGR141W PAP2P53632 584 aaKnown RBP11.37□□□□□ -0.59
VPS62YGR141W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
VPS62YGR141W SNF2P22082 1703 aa11.37□□□□□ -0.59
VPS62YGR141W PRP43P53131 767 aaKnown RBP11.36□□□□□ -0.59
VPS62YGR141W RRP46P53256 223 aaPredicted RBP11.36□□□□□ -0.59
VPS62YGR141W PRD1P25375 712 aa11.35□□□□□ -0.59
VPS62YGR141W HIM1Q06674 414 aa11.34□□□□□ -0.59
VPS62YGR141W ADE6P38972 1358 aaKnown RBP11.32□□□□□ -0.6
VPS62YGR141W SAP155P43612 1002 aa11.32□□□□□ -0.6
VPS62YGR141W AUS1Q08409 1394 aa11.32□□□□□ -0.6
VPS62YGR141W RAD2P07276 1031 aa11.31□□□□□ -0.6
VPS62YGR141W CSE4P36012 229 aa11.31□□□□□ -0.6
VPS62YGR141W FUN12P39730 1002 aaKnown RBP11.31□□□□□ -0.6
VPS62YGR141W RPO41P13433 1351 aaKnown RBP11.31□□□□□ -0.6
VPS62YGR141W BUD27P43573 796 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
VPS62YGR141W RPS24AP0CX31 135 aaKnown RBP11.28□□□□□ -0.6
VPS62YGR141W RPS24BP0CX32 135 aaKnown RBP11.28□□□□□ -0.6
VPS62YGR141W THI22Q06490 572 aa11.28□□□□□ -0.6
VPS62YGR141W MAK21Q12176 1025 aaKnown RBP11.27□□□□□ -0.6
VPS62YGR141W TPD3P31383 635 aa11.26□□□□□ -0.61
VPS62YGR141W DIP2Q12220 943 aaPredicted RBP11.26□□□□□ -0.61
VPS62YGR141W SIR4P11978 1358 aa11.26□□□□□ -0.61
VPS62YGR141W GAS4Q08271 471 aa11.26□□□□□ -0.61
VPS62YGR141W DPS1P04802 557 aaKnown RBP11.25□□□□□ -0.61
VPS62YGR141W RPC31P17890 251 aa11.25□□□□□ -0.61
VPS62YGR141W HEF3P53978 1044 aaKnown RBP11.24□□□□□ -0.61
VPS62YGR141W YFR016CP43597 1233 aaKnown RBP11.23□□□□□ -0.61
VPS62YGR141W YRF1-4O13559 1382 aa11.22□□□□□ -0.61
VPS62YGR141W AKL1P38080 1108 aaKnown RBP11.21□□□□□ -0.61
VPS62YGR141W USO1P25386 1790 aa11.21□□□□□ -0.62
VPS62YGR141W YIL092WP40497 633 aa11.2□□□□□ -0.62
VPS62YGR141W RTT109Q07794 436 aa11.2□□□□□ -0.62
VPS62YGR141W THI12P42883 340 aa11.18□□□□□ -0.62
VPS62YGR141W THI5P43534 340 aa11.18□□□□□ -0.62
VPS62YGR141W THI11P47183 340 aa11.18□□□□□ -0.62
VPS62YGR141W YNL050CP53952 270 aa11.18□□□□□ -0.62
VPS62YGR141W THI13Q07748 340 aa11.18□□□□□ -0.62
VPS62YGR141W DAL5P15365 543 aa11.17□□□□□ -0.62
VPS62YGR141W MAM1P40065 302 aa11.17□□□□□ -0.62
VPS62YGR141W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.17□□□□□ -0.62not detected
VPS62YGR141W GYP7P48365 746 aa11.16□□□□□ -0.62
VPS62YGR141W DSD1P53095 428 aa11.16□□□□□ -0.62
VPS62YGR141W APC1P53886 1748 aa11.15□□□□□ -0.62
VPS62YGR141W ZDS1P50111 915 aaKnown RBP11.15□□□□□ -0.62
VPS62YGR141W CTF4Q01454 927 aa11.15□□□□□ -0.62
VPS62YGR141W POL32P47110 350 aa11.13□□□□□ -0.63
VPS62YGR141W NTH2P35172 780 aa11.12□□□□□ -0.63
VPS62YGR141W EDE1P34216 1381 aa11.12□□□□□ -0.63
VPS62YGR141W PRP5P21372 849 aaPredicted RBP11.1□□□□□ -0.63
VPS62YGR141W YIR014WP40570 242 aa11.1□□□□□ -0.63
VPS62YGR141W AOS1Q06624 347 aa11.1□□□□□ -0.63
VPS62YGR141W YRF1-2P40105 1681 aa11.09□□□□□ -0.63
VPS62YGR141W HSP104P31539 908 aaKnown RBP11.09□□□□□ -0.63
VPS62YGR141W RRT14P40470 206 aa11.09□□□□□ -0.63
VPS62YGR141W ECM16Q04217 1267 aaKnown RBP11.08□□□□□ -0.64
VPS62YGR141W PUF6Q04373 656 aaKnown RBP11.08□□□□□ -0.64
VPS62YGR141W SLM3Q12093 417 aa11.08□□□□□ -0.64
VPS62YGR141W PRP45P28004 379 aaPredicted RBP11.07□□□□□ -0.64
VPS62YGR141W UGA3P26370 528 aa11.05□□□□□ -0.64
VPS62YGR141W SRT1Q03175 343 aa11.05□□□□□ -0.64
VPS62YGR141W NSE3Q05541 303 aa11.05□□□□□ -0.64
VPS62YGR141W TY4B-HP0C2J7 1802 aa11.04□□□□□ -0.64
VPS62YGR141W TY4B-JP47024 1803 aa11.04□□□□□ -0.64
VPS62YGR141W OPY1P38271 328 aa11.03□□□□□ -0.64
VPS62YGR141W BMS1Q08965 1183 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms