RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeastyeast

Gene VAM7, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM7YGL212W GIN4Q12263 1142 aa7.16□□□□□ -1.26
VAM7YGL212W NUG1P40010 520 aaKnown RBP7.15□□□□□ -1.26
VAM7YGL212W VPS72Q03388 795 aa7.15□□□□□ -1.26
VAM7YGL212W PDR11P40550 1411 aa7.15□□□□□ -1.27
VAM7YGL212W VMR1P38735 1592 aa7.15□□□□□ -1.27
VAM7YGL212W YBL086CP38177 466 aa7.12□□□□□ -1.27
VAM7YGL212W IPL1P38991 367 aa7.12□□□□□ -1.27
VAM7YGL212W CKB1P43639 278 aa7.12□□□□□ -1.27
VAM7YGL212W NOP7P53261 605 aaKnown RBP7.12□□□□□ -1.27
VAM7YGL212W ENT1Q12518 454 aa7.12□□□□□ -1.27
VAM7YGL212W IMH1Q06704 911 aaKnown RBP7.1□□□□□ -1.27
VAM7YGL212W ENV9Q08651 330 aa7.1□□□□□ -1.27
VAM7YGL212W UBP1P25037 809 aa7.08□□□□□ -1.28
VAM7YGL212W UGA2P38067 497 aa7.08□□□□□ -1.28
VAM7YGL212W CWC22P53333 577 aaKnown RBP7.08□□□□□ -1.28
VAM7YGL212W TYS1P36421 394 aaKnown RBP7.04□□□□□ -1.28
VAM7YGL212W TOA1P32773 286 aa7.03□□□□□ -1.28
VAM7YGL212W OSW7P43611 510 aa7.03□□□□□ -1.28
VAM7YGL212W ATG36P46983 293 aa7.03□□□□□ -1.28
VAM7YGL212W RTS3P53289 263 aa7.03□□□□□ -1.28
VAM7YGL212W RLP24Q07915 199 aaKnown RBP7.03□□□□□ -1.28
VAM7YGL212W HIF1Q12373 385 aa7.02□□□□□ -1.29
VAM7YGL212W BRN1P38170 754 aa7.01□□□□□ -1.29
VAM7YGL212W GTT3P39996 337 aa7□□□□□ -1.29
VAM7YGL212W FAR11P53917 953 aa6.99□□□□□ -1.29
VAM7YGL212W DOS2P54858 310 aa6.99□□□□□ -1.29
VAM7YGL212W NAB3P38996 802 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
VAM7YGL212W SLX8P40072 274 aa6.98□□□□□ -1.29
VAM7YGL212W TPO2P53283 614 aa6.98□□□□□ -1.29
VAM7YGL212W CAT8P39113 1433 aa6.97□□□□□ -1.29
VAM7YGL212W GEA1P47102 1408 aaPredicted RBP6.96□□□□□ -1.3
VAM7YGL212W LAM6Q08001 693 aa6.96□□□□□ -1.3
VAM7YGL212W SSA2P10592 639 aaKnown RBP6.95□□□□□ -1.3
VAM7YGL212W ALD2P47771 506 aa6.94□□□□□ -1.3
VAM7YGL212W PSH1Q12161 406 aa6.94□□□□□ -1.3
VAM7YGL212W PDR5P33302 1511 aaKnown RBP6.94□□□□□ -1.3
VAM7YGL212W DEF1P35732 738 aaKnown RBP6.93□□□□□ -1.3
VAM7YGL212W RPN11P43588 306 aaKnown RBP6.93□□□□□ -1.3
VAM7YGL212W HGH1P48362 394 aaKnown RBP6.93□□□□□ -1.3
VAM7YGL212W SPC42P36094 363 aa6.92□□□□□ -1.3
VAM7YGL212W YRF1-2P40105 1681 aa6.91□□□□□ -1.3
VAM7YGL212W GEF1P37020 779 aa6.91□□□□□ -1.3
VAM7YGL212W RPG1P38249 964 aaKnown RBP6.91□□□□□ -1.3
VAM7YGL212W SSF1P38789 453 aaPredicted RBP6.91□□□□□ -1.3
VAM7YGL212W RPS0AP32905 252 aaKnown RBP6.9□□□□□ -1.3
VAM7YGL212W SSP1P38871 571 aa6.9□□□□□ -1.3
VAM7YGL212W YJR008WP47085 338 aa6.9□□□□□ -1.3
VAM7YGL212W LYS4P49367 693 aaPredicted RBP6.9□□□□□ -1.3
VAM7YGL212W BUD21Q08492 214 aaPredicted RBP6.9□□□□□ -1.3
VAM7YGL212W SSA4P22202 642 aaKnown RBP6.88□□□□□ -1.31
VAM7YGL212W YKR023WP36119 530 aaKnown RBP6.88□□□□□ -1.31
VAM7YGL212W MRX12P47084 519 aa6.88□□□□□ -1.31
VAM7YGL212W KRE5P22023 1365 aa6.87□□□□□ -1.31
VAM7YGL212W YNR029CP53729 429 aaKnown RBP6.87□□□□□ -1.31
VAM7YGL212W RIA1P53893 1110 aa6.87□□□□□ -1.31
VAM7YGL212W PAM1P37304 830 aaKnown RBP6.86□□□□□ -1.31
VAM7YGL212W FPR3P38911 411 aaKnown RBP6.86□□□□□ -1.31
VAM7YGL212W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
VAM7YGL212W GCN2P15442 1659 aa6.85□□□□□ -1.31
VAM7YGL212W PDR1P12383 1068 aa6.84□□□□□ -1.31
VAM7YGL212W KIP3P53086 805 aaKnown RBP6.84□□□□□ -1.31
VAM7YGL212W CFT1Q06632 1357 aaKnown RBP6.83□□□□□ -1.32
VAM7YGL212W MPP10P47083 593 aaKnown RBP6.83□□□□□ -1.32
VAM7YGL212W NPR2P39923 615 aa6.82□□□□□ -1.32
VAM7YGL212W YJL181WP46987 611 aa6.82□□□□□ -1.32
VAM7YGL212W TY4A-JP47023 414 aa6.82□□□□□ -1.32
VAM7YGL212W PEX21P50091 288 aa6.82□□□□□ -1.32
VAM7YGL212W EDE1P34216 1381 aa6.82□□□□□ -1.32
VAM7YGL212W TOM1Q03280 3268 aa6.81□□□□□ -1.32
VAM7YGL212W SLD2P34252 453 aa6.81□□□□□ -1.32
VAM7YGL212W ISW1P38144 1129 aa6.81□□□□□ -1.32
VAM7YGL212W CTH1P47976 325 aa6.81□□□□□ -1.32
VAM7YGL212W ZDS1P50111 915 aaKnown RBP6.81□□□□□ -1.32
VAM7YGL212W PUS5Q06244 254 aa6.8□□□□□ -1.32
VAM7YGL212W NHA1Q99271 985 aa6.8□□□□□ -1.32
VAM7YGL212W SDH2P21801 266 aa6.79□□□□□ -1.32
VAM7YGL212W SPB4P25808 606 aaPredicted RBP6.79□□□□□ -1.32
VAM7YGL212W RPT2P40327 437 aaKnown RBP6.79□□□□□ -1.32
VAM7YGL212W DOT5P40553 215 aa6.79□□□□□ -1.32
VAM7YGL212W FPR4Q06205 392 aaPredicted RBP6.79□□□□□ -1.32
VAM7YGL212W BRE1Q07457 700 aaKnown RBP6.79□□□□□ -1.32
VAM7YGL212W SPT16P32558 1035 aaKnown RBP6.78□□□□□ -1.32
VAM7YGL212W MAC1P35192 417 aa6.78□□□□□ -1.32
VAM7YGL212W OCA5P38738 679 aa6.78□□□□□ -1.32
VAM7YGL212W YAF9P53930 226 aa6.77□□□□□ -1.33
VAM7YGL212W RAD2P07276 1031 aa6.76□□□□□ -1.33
VAM7YGL212W PRP45P28004 379 aaPredicted RBP6.76□□□□□ -1.33
VAM7YGL212W NMD2P38798 1089 aaKnown RBP6.76□□□□□ -1.33
VAM7YGL212W UBX5Q06682 500 aa6.76□□□□□ -1.33
VAM7YGL212W RRP5Q05022 1729 aaKnown RBP6.76□□□□□ -1.33
VAM7YGL212W KIN1P13185 1064 aa6.75□□□□□ -1.33
VAM7YGL212W DUS1P53759 423 aaKnown RBP6.75□□□□□ -1.33
VAM7YGL212W MAM3Q12296 706 aa6.75□□□□□ -1.33
VAM7YGL212W HSP82P02829 709 aaKnown RBP6.74□□□□□ -1.33
VAM7YGL212W TLG1Q03322 224 aa6.74□□□□□ -1.33
VAM7YGL212W SUB2Q07478 446 aaKnown RBP6.74□□□□□ -1.33
VAM7YGL212W GIR2Q03768 265 aaPredicted RBP6.73□□□□□ -1.33
VAM7YGL212W GAL11P19659 1081 aa6.72□□□□□ -1.33
VAM7YGL212W RRN6P32786 894 aa6.72□□□□□ -1.33
VAM7YGL212W HOS4P40480 1083 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms