RNA–Protein interactions for RNA: YFR037C

RSC8, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC8, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC8	YFR037C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.95	□□□□□ -0.5
RSC8	YFR037C	CFT1	Q06632	1357 aa	Known RBP	11.95	□□□□□ -0.5
RSC8	YFR037C	THI12	P42883	340 aa		11.94	□□□□□ -0.5
RSC8	YFR037C	THI5	P43534	340 aa		11.94	□□□□□ -0.5
RSC8	YFR037C	THI11	P47183	340 aa		11.94	□□□□□ -0.5
RSC8	YFR037C	THI13	Q07748	340 aa		11.94	□□□□□ -0.5
RSC8	YFR037C	RTG3	P38165	486 aa		11.93	□□□□□ -0.5
RSC8	YFR037C	MRX12	P47084	519 aa		11.93	□□□□□ -0.5
RSC8	YFR037C	FKH1	P40466	484 aa		11.92	□□□□□ -0.5
RSC8	YFR037C	YML133C	Q03099	1374 aa		11.9	□□□□□ -0.5
RSC8	YFR037C	YLL067C	Q07888	1374 aa		11.9	□□□□□ -0.5
RSC8	YFR037C	YLL066C	Q99208	1374 aa		11.9	□□□□□ -0.5
RSC8	YFR037C	RIA1	P53893	1110 aa		11.88	□□□□□ -0.51
RSC8	YFR037C	PSK1	P31374	1356 aa		11.87	□□□□□ -0.51
RSC8	YFR037C	RCM1	P53972	490 aa		11.83	□□□□□ -0.52
RSC8	YFR037C	SNF2	P22082	1703 aa		11.83	□□□□□ -0.52
RSC8	YFR037C	YEF3	P16521	1044 aa	Known RBP	11.81	□□□□□ -0.52
RSC8	YFR037C	IOC4	Q04213	475 aa		11.81	□□□□□ -0.52
RSC8	YFR037C	PPH3	P32345	308 aa		11.8	□□□□□ -0.52
RSC8	YFR037C	TRK1	P12685	1235 aa		11.78	□□□□□ -0.52
RSC8	YFR037C	YNR029C	P53729	429 aa	Known RBP	11.78	□□□□□ -0.52
RSC8	YFR037C	RPP0	P05317	312 aa	Known RBP	11.78	□□□□□ -0.52
RSC8	YFR037C	CPS1	P27614	576 aa		11.76	□□□□□ -0.53
RSC8	YFR037C	VPS27	P40343	622 aa	Known RBP	11.72	□□□□□ -0.53
RSC8	YFR037C	LEU2	P04173	364 aa	Predicted RBP	11.71	□□□□□ -0.53
RSC8	YFR037C	TAP42	Q04372	366 aa		11.71	□□□□□ -0.53
RSC8	YFR037C	CDC45	Q08032	650 aa		11.71	□□□□□ -0.53
RSC8	YFR037C	MTR4	P47047	1073 aa	Known RBP	11.71	□□□□□ -0.54
RSC8	YFR037C	PDI1	P17967	522 aa	Known RBP	11.7	□□□□□ -0.54
RSC8	YFR037C	YDL144C	Q07589	356 aa		11.7	□□□□□ -0.54
RSC8	YFR037C	TY4B-H	P0C2J7	1802 aa		11.68	□□□□□ -0.54
RSC8	YFR037C	TY4B-J	P47024	1803 aa		11.68	□□□□□ -0.54
RSC8	YFR037C	KAR2	P16474	682 aa	Known RBP	11.68	□□□□□ -0.54
RSC8	YFR037C	ADE6	P38972	1358 aa	Known RBP	11.67	□□□□□ -0.54
RSC8	YFR037C	AUS1	Q08409	1394 aa		11.67	□□□□□ -0.54
RSC8	YFR037C	RRP46	P53256	223 aa	Predicted RBP	11.65	□□□□□ -0.54
RSC8	YFR037C	RVB2	Q12464	471 aa	Known RBP	11.65	□□□□□ -0.55
RSC8	YFR037C	GRX4	P32642	244 aa		11.64	□□□□□ -0.55
RSC8	YFR037C	PTP3	P40048	928 aa		11.64	□□□□□ -0.55
RSC8	YFR037C	RTF1	P53064	558 aa		11.64	□□□□□ -0.55
RSC8	YFR037C	MPP10	P47083	593 aa	Known RBP	11.62	□□□□□ -0.55
RSC8	YFR037C	PRP43	P53131	767 aa	Known RBP	11.62	□□□□□ -0.55
RSC8	YFR037C	HIM1	Q06674	414 aa		11.62	□□□□□ -0.55
RSC8	YFR037C	RTR1	P40084	226 aa	Predicted RBP	11.62	□□□□□ -0.55
RSC8	YFR037C	YRB30	P53107	440 aa	Predicted RBP	11.62	□□□□□ -0.55
RSC8	YFR037C	SUI2	P20459	304 aa	Known RBP	11.61	□□□□□ -0.55
RSC8	YFR037C	YAH1	Q12184	172 aa	Known RBP	11.6	□□□□□ -0.55
RSC8	YFR037C	YIL177C	P40434	1758 aa		11.59	□□□□□ -0.55
RSC8	YFR037C	YJL225C	P40889	1758 aa		11.59	□□□□□ -0.55
RSC8	YFR037C	FUN12	P39730	1002 aa	Known RBP	11.59	□□□□□ -0.55
RSC8	YFR037C	APC1	P53886	1748 aa		11.58	□□□□□ -0.55
RSC8	YFR037C	RPS24A	P0CX31	135 aa	Known RBP	11.58	□□□□□ -0.56
RSC8	YFR037C	RPS24B	P0CX32	135 aa	Known RBP	11.58	□□□□□ -0.56
RSC8	YFR037C	CSE4	P36012	229 aa		11.58	□□□□□ -0.56
RSC8	YFR037C	PAP2	P53632	584 aa	Known RBP	11.58	□□□□□ -0.56
RSC8	YFR037C	YRF1-2	P40105	1681 aa		11.58	□□□□□ -0.56
RSC8	YFR037C	RPO41	P13433	1351 aa	Known RBP	11.57	□□□□□ -0.56
RSC8	YFR037C	APP1	P53933	587 aa		11.55	□□□□□ -0.56
RSC8	YFR037C	RRP5	Q05022	1729 aa	Known RBP	11.55	□□□□□ -0.56
RSC8	YFR037C	PRD1	P25375	712 aa		11.55	□□□□□ -0.56
RSC8	YFR037C	TFA1	P36100	482 aa		11.54	□□□□□ -0.56
RSC8	YFR037C	THI22	Q06490	572 aa		11.53	□□□□□ -0.56
RSC8	YFR037C	GAS4	Q08271	471 aa		11.53	□□□□□ -0.56
RSC8	YFR037C	DPS1	P04802	557 aa	Known RBP	11.52	□□□□□ -0.56
RSC8	YFR037C	SAP155	P43612	1002 aa		11.52	□□□□□ -0.56
RSC8	YFR037C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.52	□□□□□ -0.56	not detected
RSC8	YFR037C	FKS3	Q04952	1785 aa		11.51	□□□□□ -0.57
RSC8	YFR037C	HEF3	P53978	1044 aa	Known RBP	11.5	□□□□□ -0.57
RSC8	YFR037C	URB1	P34241	1764 aa	Known RBP	11.49	□□□□□ -0.57
RSC8	YFR037C	REB1	P21538	810 aa		11.49	□□□□□ -0.57
RSC8	YFR037C	TPD3	P31383	635 aa		11.49	□□□□□ -0.57
RSC8	YFR037C	ENT1	Q12518	454 aa		11.48	□□□□□ -0.57
RSC8	YFR037C	SIR4	P11978	1358 aa		11.48	□□□□□ -0.57
RSC8	YFR037C	YRF1-4	O13559	1382 aa		11.47	□□□□□ -0.57
RSC8	YFR037C	FPR3	P38911	411 aa	Known RBP	11.46	□□□□□ -0.58
RSC8	YFR037C	RTT109	Q07794	436 aa		11.46	□□□□□ -0.58
RSC8	YFR037C	PRP45	P28004	379 aa	Predicted RBP	11.44	□□□□□ -0.58
RSC8	YFR037C	AKL1	P38080	1108 aa	Known RBP	11.44	□□□□□ -0.58
RSC8	YFR037C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
RSC8	YFR037C	YIL055C	P40523	627 aa	Known RBP	11.43	□□□□□ -0.58
RSC8	YFR037C	RAD2	P07276	1031 aa		11.43	□□□□□ -0.58
RSC8	YFR037C	ENV9	Q08651	330 aa		11.43	□□□□□ -0.58
RSC8	YFR037C	YIL092W	P40497	633 aa		11.41	□□□□□ -0.58
RSC8	YFR037C	CAB3	P36076	571 aa		11.4	□□□□□ -0.58
RSC8	YFR037C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.4	□□□□□ -0.59	not detected
RSC8	YFR037C	DSD1	P53095	428 aa		11.4	□□□□□ -0.59
RSC8	YFR037C	YPR148C	Q06523	435 aa		11.4	□□□□□ -0.59
RSC8	YFR037C	PRP5	P21372	849 aa	Predicted RBP	11.39	□□□□□ -0.59
RSC8	YFR037C	GLN1	P32288	370 aa	Known RBP	11.38	□□□□□ -0.59
RSC8	YFR037C	DAL5	P15365	543 aa		11.37	□□□□□ -0.59
RSC8	YFR037C	MAK21	Q12176	1025 aa	Known RBP	11.37	□□□□□ -0.59
RSC8	YFR037C	YNL050C	P53952	270 aa		11.36	□□□□□ -0.59
RSC8	YFR037C	SLM3	Q12093	417 aa		11.36	□□□□□ -0.59
RSC8	YFR037C	NTH2	P35172	780 aa		11.35	□□□□□ -0.59
RSC8	YFR037C	RPC31	P17890	251 aa		11.34	□□□□□ -0.59
RSC8	YFR037C	EBP2	P36049	427 aa	Known RBP	11.34	□□□□□ -0.59
RSC8	YFR037C	MSB3	P48566	633 aa	Predicted RBP	11.34	□□□□□ -0.59
RSC8	YFR037C	IMH1	Q06704	911 aa	Known RBP	11.34	□□□□□ -0.59
RSC8	YFR037C	GYP7	P48365	746 aa		11.33	□□□□□ -0.6
RSC8	YFR037C	HSP104	P31539	908 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms