RNA–Protein interactions for RNA: YER119C

AVT6, Transcript of Vacuolar aspartate and glutamate exporter, yeastyeast

Gene AVT6, Length 1,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT6YER119C RCM1P53972 490 aa13.72□□□□□ -0.21
AVT6YER119C MLP1Q02455 1875 aaKnown RBP13.71□□□□□ -0.21
AVT6YER119C CPS1P27614 576 aa13.7□□□□□ -0.22
AVT6YER119C PPH3P32345 308 aa13.69□□□□□ -0.22
AVT6YER119C RTG3P38165 486 aa13.69□□□□□ -0.22
AVT6YER119C YML133CQ03099 1374 aa13.69□□□□□ -0.22
AVT6YER119C YLL067CQ07888 1374 aa13.69□□□□□ -0.22
AVT6YER119C YLL066CQ99208 1374 aa13.69□□□□□ -0.22
AVT6YER119C THI12P42883 340 aa13.67□□□□□ -0.22
AVT6YER119C THI5P43534 340 aa13.67□□□□□ -0.22
AVT6YER119C THI11P47183 340 aa13.67□□□□□ -0.22
AVT6YER119C THI13Q07748 340 aa13.67□□□□□ -0.22
AVT6YER119C NSR1P27476 414 aaKnown RBP RIP-Chip data13.66□□□□□ -0.22not detected
AVT6YER119C NST1P53935 1240 aa13.61□□□□□ -0.23
AVT6YER119C LEU2P04173 364 aaPredicted RBP13.6□□□□□ -0.23
AVT6YER119C LEU3P08638 886 aa13.6□□□□□ -0.23
AVT6YER119C ADE6P38972 1358 aaKnown RBP13.58□□□□□ -0.24
AVT6YER119C MTR4P47047 1073 aaKnown RBP13.58□□□□□ -0.24
AVT6YER119C PRP43P53131 767 aaKnown RBP13.55□□□□□ -0.24
AVT6YER119C IOC4Q04213 475 aa13.54□□□□□ -0.24
AVT6YER119C TAP42Q04372 366 aa13.53□□□□□ -0.24
AVT6YER119C YEF3P16521 1044 aaKnown RBP13.52□□□□□ -0.25
AVT6YER119C PDI1P17967 522 aaKnown RBP13.51□□□□□ -0.25
AVT6YER119C TRK1P12685 1235 aa13.47□□□□□ -0.25
AVT6YER119C YFR006WP43590 535 aa13.47□□□□□ -0.25
AVT6YER119C GRX4P32642 244 aa13.46□□□□□ -0.25
AVT6YER119C RTF1P53064 558 aa13.46□□□□□ -0.25
AVT6YER119C CSE4P36012 229 aa13.45□□□□□ -0.26
AVT6YER119C TY4B-HP0C2J7 1802 aa13.44□□□□□ -0.26
AVT6YER119C TY4B-JP47024 1803 aa13.44□□□□□ -0.26
AVT6YER119C AUS1Q08409 1394 aa13.44□□□□□ -0.26
AVT6YER119C RPS24AP0CX31 135 aaKnown RBP13.43□□□□□ -0.26
AVT6YER119C RPS24BP0CX32 135 aaKnown RBP13.43□□□□□ -0.26
AVT6YER119C PRS1P32895 427 aaKnown RBP13.43□□□□□ -0.26
AVT6YER119C PTP3P40048 928 aa13.43□□□□□ -0.26
AVT6YER119C KAR2P16474 682 aaKnown RBP13.42□□□□□ -0.26
AVT6YER119C HIM1Q06674 414 aa13.39□□□□□ -0.27
AVT6YER119C RPP0P05317 312 aaKnown RBP13.39□□□□□ -0.27
AVT6YER119C SNF2P22082 1703 aa13.34□□□□□ -0.27
AVT6YER119C RRP5Q05022 1729 aaKnown RBP13.34□□□□□ -0.27
AVT6YER119C RRP46P53256 223 aaPredicted RBP13.34□□□□□ -0.27
AVT6YER119C GAS4Q08271 471 aa13.34□□□□□ -0.27
AVT6YER119C RPO41P13433 1351 aaKnown RBP13.33□□□□□ -0.28
AVT6YER119C DPS1P04802 557 aaKnown RBP13.33□□□□□ -0.28
AVT6YER119C PRP5P21372 849 aaPredicted RBP13.33□□□□□ -0.28
AVT6YER119C YRF1-2P40105 1681 aa13.31□□□□□ -0.28
AVT6YER119C PRP45P28004 379 aaPredicted RBP13.31□□□□□ -0.28
AVT6YER119C VPS27P40343 622 aaKnown RBP13.31□□□□□ -0.28
AVT6YER119C YDL144CQ07589 356 aa13.3□□□□□ -0.28
AVT6YER119C PAP2P53632 584 aaKnown RBP13.29□□□□□ -0.28
AVT6YER119C RTR1P40084 226 aaPredicted RBP13.28□□□□□ -0.28
AVT6YER119C CDC45Q08032 650 aa13.28□□□□□ -0.28
AVT6YER119C SLM3Q12093 417 aa13.28□□□□□ -0.28
AVT6YER119C YIL177CP40434 1758 aa13.28□□□□□ -0.28
AVT6YER119C YJL225CP40889 1758 aa13.28□□□□□ -0.28
AVT6YER119C APC1P53886 1748 aa13.26□□□□□ -0.29
AVT6YER119C MSB3P48566 633 aaPredicted RBP13.25□□□□□ -0.29
AVT6YER119C MPP10P47083 593 aaKnown RBP13.24□□□□□ -0.29
AVT6YER119C PRD1P25375 712 aa13.23□□□□□ -0.29
AVT6YER119C YAH1Q12184 172 aaKnown RBP13.21□□□□□ -0.29
AVT6YER119C FKS3Q04952 1785 aa13.21□□□□□ -0.29
AVT6YER119C REB1P21538 810 aa13.2□□□□□ -0.3
AVT6YER119C AKL1P38080 1108 aaKnown RBP13.2□□□□□ -0.3
AVT6YER119C YRB30P53107 440 aaPredicted RBP13.2□□□□□ -0.3
AVT6YER119C TCB1Q12466 1186 aa13.2□□□□□ -0.3
AVT6YER119C URB1P34241 1764 aaKnown RBP13.2□□□□□ -0.3
AVT6YER119C YRF1-4O13559 1382 aa13.2□□□□□ -0.3
AVT6YER119C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.19□□□□□ -0.3not detected
AVT6YER119C ENT1Q12518 454 aa13.19□□□□□ -0.3
AVT6YER119C RSF2P46974 1380 aa13.18□□□□□ -0.3
AVT6YER119C SUI2P20459 304 aaKnown RBP13.17□□□□□ -0.3
AVT6YER119C DSD1P53095 428 aa13.17□□□□□ -0.3
AVT6YER119C THI22Q06490 572 aa13.17□□□□□ -0.3
AVT6YER119C RVB2Q12464 471 aaKnown RBP13.17□□□□□ -0.3
AVT6YER119C SAP155P43612 1002 aa13.15□□□□□ -0.3
AVT6YER119C XKS1P42826 600 aa13.14□□□□□ -0.31
AVT6YER119C CTF4Q01454 927 aa13.13□□□□□ -0.31
AVT6YER119C ENV9Q08651 330 aa13.13□□□□□ -0.31
AVT6YER119C SIR4P11978 1358 aa13.13□□□□□ -0.31
AVT6YER119C HEF3P53978 1044 aaKnown RBP13.13□□□□□ -0.31
AVT6YER119C APP1P53933 587 aa13.12□□□□□ -0.31
AVT6YER119C TPD3P31383 635 aa13.11□□□□□ -0.31
AVT6YER119C NTH2P35172 780 aa13.11□□□□□ -0.31
AVT6YER119C YNL050CP53952 270 aa13.11□□□□□ -0.31
AVT6YER119C RCR1P38212 213 aa13.1□□□□□ -0.31
AVT6YER119C NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.1□□□□□ -0.31not detected
AVT6YER119C RTT109Q07794 436 aa13.1□□□□□ -0.31
AVT6YER119C HSP104P31539 908 aaKnown RBP13.09□□□□□ -0.31
AVT6YER119C IES2P40154 320 aa13.07□□□□□ -0.32
AVT6YER119C AOS1Q06624 347 aa13.07□□□□□ -0.32
AVT6YER119C IMH1Q06704 911 aaKnown RBP13.05□□□□□ -0.32
AVT6YER119C YRF1-3P0CX14 1859 aa13.05□□□□□ -0.32
AVT6YER119C YRF1-7P0CX15 1859 aa13.05□□□□□ -0.32
AVT6YER119C YRF1-6P53819 1859 aa13.05□□□□□ -0.32
AVT6YER119C MAM1P40065 302 aa13.04□□□□□ -0.32
AVT6YER119C NOP2P40991 618 aaKnown RBP13.04□□□□□ -0.32
AVT6YER119C ZDS1P50111 915 aaKnown RBP13.02□□□□□ -0.33
AVT6YER119C MEC3Q02574 474 aa13.02□□□□□ -0.33
AVT6YER119C GYP7P48365 746 aa13.01□□□□□ -0.33
AVT6YER119C INP54Q08227 384 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms