RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SEC3P33332 1336 aaKnown RBP10.43□□□□□ -0.74
PUP3YER094C PDS5Q04264 1277 aa10.41□□□□□ -0.74
PUP3YER094C PSK1P31374 1356 aa10.4□□□□□ -0.74
PUP3YER094C CPS1P27614 576 aa10.39□□□□□ -0.75
PUP3YER094C PPH3P32345 308 aa10.39□□□□□ -0.75
PUP3YER094C SPT7P35177 1332 aa10.37□□□□□ -0.75
PUP3YER094C RTG3P38165 486 aa10.34□□□□□ -0.75
PUP3YER094C TY4B-HP0C2J7 1802 aa10.33□□□□□ -0.76
PUP3YER094C TY4B-JP47024 1803 aa10.33□□□□□ -0.76
PUP3YER094C FKH1P40466 484 aa10.33□□□□□ -0.76
PUP3YER094C PSD2P53037 1138 aaKnown RBP10.33□□□□□ -0.76
PUP3YER094C YML133CQ03099 1374 aa10.33□□□□□ -0.76
PUP3YER094C YLL067CQ07888 1374 aa10.33□□□□□ -0.76
PUP3YER094C YLL066CQ99208 1374 aa10.33□□□□□ -0.76
PUP3YER094C LEU3P08638 886 aa10.32□□□□□ -0.76
PUP3YER094C LEU2P04173 364 aaPredicted RBP10.29□□□□□ -0.76
PUP3YER094C ADE6P38972 1358 aaKnown RBP10.28□□□□□ -0.76
PUP3YER094C MTR4P47047 1073 aaKnown RBP10.28□□□□□ -0.76
PUP3YER094C NST1P53935 1240 aa10.26□□□□□ -0.77
PUP3YER094C PDI1P17967 522 aaKnown RBP10.24□□□□□ -0.77
PUP3YER094C CSE4P36012 229 aa10.24□□□□□ -0.77
PUP3YER094C RRP5Q05022 1729 aaKnown RBP10.24□□□□□ -0.77
PUP3YER094C ENP1P38333 483 aaKnown RBP10.23□□□□□ -0.77
PUP3YER094C RPS24AP0CX31 135 aaKnown RBP10.22□□□□□ -0.77
PUP3YER094C RPS24BP0CX32 135 aaKnown RBP10.22□□□□□ -0.77
PUP3YER094C PTP3P40048 928 aa10.22□□□□□ -0.77
PUP3YER094C RTF1P53064 558 aa10.22□□□□□ -0.77
PUP3YER094C KAR2P16474 682 aaKnown RBP10.19□□□□□ -0.78
PUP3YER094C PRP43P53131 767 aaKnown RBP10.19□□□□□ -0.78
PUP3YER094C YEF3P16521 1044 aaKnown RBP10.18□□□□□ -0.78
PUP3YER094C PRP45P28004 379 aaPredicted RBP10.18□□□□□ -0.78
PUP3YER094C TAP42Q04372 366 aa10.18□□□□□ -0.78
PUP3YER094C YIL177CP40434 1758 aa10.17□□□□□ -0.78
PUP3YER094C YJL225CP40889 1758 aa10.17□□□□□ -0.78
PUP3YER094C SNF2P22082 1703 aa10.16□□□□□ -0.78
PUP3YER094C DPS1P04802 557 aaKnown RBP10.16□□□□□ -0.78
PUP3YER094C TRK1P12685 1235 aa10.16□□□□□ -0.78
PUP3YER094C GRX4P32642 244 aa10.16□□□□□ -0.78
PUP3YER094C YRF1-2P40105 1681 aa10.15□□□□□ -0.78
PUP3YER094C AUS1Q08409 1394 aa10.15□□□□□ -0.78
PUP3YER094C PRP5P21372 849 aaPredicted RBP10.15□□□□□ -0.78
PUP3YER094C GAS4Q08271 471 aa10.15□□□□□ -0.78
PUP3YER094C FKS3Q04952 1785 aa10.15□□□□□ -0.78
PUP3YER094C HIM1Q06674 414 aa10.14□□□□□ -0.79
PUP3YER094C NSR1P27476 414 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79 RIP-Chip
PUP3YER094C URB1P34241 1764 aaKnown RBP10.12□□□□□ -0.79
PUP3YER094C REB1P21538 810 aa10.12□□□□□ -0.79
PUP3YER094C PAP2P53632 584 aaKnown RBP10.11□□□□□ -0.79
PUP3YER094C MSB3P48566 633 aaPredicted RBP10.1□□□□□ -0.79
PUP3YER094C APP1P53933 587 aa10.09□□□□□ -0.79
PUP3YER094C YAH1Q12184 172 aaKnown RBP10.09□□□□□ -0.79
PUP3YER094C ENT1Q12518 454 aa10.08□□□□□ -0.8
PUP3YER094C RPO41P13433 1351 aaKnown RBP10.08□□□□□ -0.8
PUP3YER094C APC1P53886 1748 aa10.07□□□□□ -0.8
PUP3YER094C SLM3Q12093 417 aa10.07□□□□□ -0.8
PUP3YER094C TCB1Q12466 1186 aa10.06□□□□□ -0.8
PUP3YER094C RTR1P40084 226 aaPredicted RBP10.05□□□□□ -0.8
PUP3YER094C IOC4Q04213 475 aa10.04□□□□□ -0.8
PUP3YER094C ENV9Q08651 330 aa10.04□□□□□ -0.8
PUP3YER094C RSF2P46974 1380 aa10.03□□□□□ -0.8
PUP3YER094C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
PUP3YER094C RRP46P53256 223 aaPredicted RBP10.03□□□□□ -0.8
PUP3YER094C XKS1P42826 600 aa10.02□□□□□ -0.81
PUP3YER094C YDL144CQ07589 356 aa10.02□□□□□ -0.81
PUP3YER094C IMH1Q06704 911 aaKnown RBP10□□□□□ -0.81
PUP3YER094C RPP0P05317 312 aaKnown RBP9.99□□□□□ -0.81
PUP3YER094C PRS1P32895 427 aaKnown RBP9.99□□□□□ -0.81
PUP3YER094C MPP10P47083 593 aaKnown RBP9.99□□□□□ -0.81
PUP3YER094C YRF1-3P0CX14 1859 aa9.98□□□□□ -0.81
PUP3YER094C YRF1-7P0CX15 1859 aa9.98□□□□□ -0.81
PUP3YER094C YRF1-6P53819 1859 aa9.98□□□□□ -0.81
PUP3YER094C AKL1P38080 1108 aaKnown RBP9.98□□□□□ -0.81
PUP3YER094C IES2P40154 320 aa9.97□□□□□ -0.81
PUP3YER094C SIR4P11978 1358 aa9.97□□□□□ -0.81
PUP3YER094C PRD1P25375 712 aa9.96□□□□□ -0.82
PUP3YER094C VPS27P40343 622 aaKnown RBP9.96□□□□□ -0.82
PUP3YER094C DSD1P53095 428 aa9.96□□□□□ -0.82
PUP3YER094C CDC45Q08032 650 aa9.95□□□□□ -0.82
PUP3YER094C YRF1-4O13559 1382 aa9.95□□□□□ -0.82
PUP3YER094C HSP104P31539 908 aaKnown RBP9.94□□□□□ -0.82
PUP3YER094C RCR1P38212 213 aa9.94□□□□□ -0.82
PUP3YER094C YIL055CP40523 627 aaKnown RBP9.93□□□□□ -0.82
PUP3YER094C ROM2P51862 1356 aaKnown RBP9.92□□□□□ -0.82
PUP3YER094C THI22Q06490 572 aa9.92□□□□□ -0.82
PUP3YER094C SUI2P20459 304 aaKnown RBP9.91□□□□□ -0.82
PUP3YER094C YKL133CP36066 463 aa9.91□□□□□ -0.82
PUP3YER094C MEC3Q02574 474 aa9.91□□□□□ -0.82
PUP3YER094C TPD3P31383 635 aa9.9□□□□□ -0.82
PUP3YER094C CTF4Q01454 927 aa9.9□□□□□ -0.82
PUP3YER094C AOS1Q06624 347 aa9.9□□□□□ -0.82
PUP3YER094C SAP155P43612 1002 aa9.89□□□□□ -0.83
PUP3YER094C RVB2Q12464 471 aaKnown RBP9.89□□□□□ -0.83
PUP3YER094C NTH2P35172 780 aa9.88□□□□□ -0.83
PUP3YER094C RTT109Q07794 436 aa9.88□□□□□ -0.83
PUP3YER094C ADE16P54113 591 aaKnown RBP9.87□□□□□ -0.83
PUP3YER094C FRK1Q03002 865 aaPredicted RBP9.87□□□□□ -0.83
PUP3YER094C INP54Q08227 384 aaKnown RBP9.87□□□□□ -0.83
PUP3YER094C YNL050CP53952 270 aa9.86□□□□□ -0.83
PUP3YER094C HEF3P53978 1044 aaKnown RBP9.86□□□□□ -0.83
PUP3YER094C DOT5P40553 215 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms