RNA–Protein interactions for RNA: YEL015W

EDC3, Transcript of Non-essential conserved protein with a role in mRNA decapping, yeastyeast

Gene EDC3, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EDC3YEL015W SWR1Q05471 1514 aa8.09□□□□□ -1.11
EDC3YEL015W YMR124WP39523 943 aaKnown RBP8.08□□□□□ -1.12
EDC3YEL015W LCD1Q04377 747 aa8.08□□□□□ -1.12
EDC3YEL015W VPS27P40343 622 aaKnown RBP8.08□□□□□ -1.12
EDC3YEL015W MDM38Q08179 573 aa8.08□□□□□ -1.12
EDC3YEL015W YOL087CQ99247 1116 aa8.08□□□□□ -1.12
EDC3YEL015W TOA1P32773 286 aa8.07□□□□□ -1.12
EDC3YEL015W SWH1P35845 1188 aa8.07□□□□□ -1.12
EDC3YEL015W RSC8P43609 557 aaKnown RBP8.07□□□□□ -1.12
EDC3YEL015W UBP10P53874 792 aaPredicted RBP8.07□□□□□ -1.12
EDC3YEL015W ZUO1P32527 433 aaKnown RBP8.06□□□□□ -1.12
EDC3YEL015W YCK3P39962 524 aa8.06□□□□□ -1.12
EDC3YEL015W RVB2Q12464 471 aaKnown RBP8.06□□□□□ -1.12
EDC3YEL015W SIN3P22579 1536 aa8.06□□□□□ -1.12
EDC3YEL015W POL1P13382 1468 aa8.05□□□□□ -1.12
EDC3YEL015W RAD3P06839 778 aa8.05□□□□□ -1.12
EDC3YEL015W YNL050CP53952 270 aa8.05□□□□□ -1.12
EDC3YEL015W UTP13Q05946 817 aaKnown RBP8.05□□□□□ -1.12
EDC3YEL015W PUS1Q12211 544 aaKnown RBP8.05□□□□□ -1.12
EDC3YEL015W YLL054CQ12244 843 aa8.05□□□□□ -1.12
EDC3YEL015W SPB4P25808 606 aaPredicted RBP8.05□□□□□ -1.12
EDC3YEL015W SPT16P32558 1035 aaKnown RBP8.05□□□□□ -1.12
EDC3YEL015W ALD3P54114 506 aa8.05□□□□□ -1.12
EDC3YEL015W KAR3P17119 729 aa8.04□□□□□ -1.12
EDC3YEL015W RPC82P32349 654 aa8.04□□□□□ -1.12
EDC3YEL015W RIM101P33400 625 aa8.04□□□□□ -1.12
EDC3YEL015W PXR1P53335 271 aaPredicted RBP8.04□□□□□ -1.12
EDC3YEL015W SEC39Q12745 709 aa8.04□□□□□ -1.12
EDC3YEL015W BPT1P14772 1559 aa8.04□□□□□ -1.12
EDC3YEL015W SSA1P10591 642 aaKnown RBP8.03□□□□□ -1.12
EDC3YEL015W SSA2P10592 639 aaKnown RBP8.03□□□□□ -1.12
EDC3YEL015W PEA2P40091 420 aa8.03□□□□□ -1.12
EDC3YEL015W ITC1P53125 1264 aa8.03□□□□□ -1.12
EDC3YEL015W MRS2Q01926 470 aa8.03□□□□□ -1.12
EDC3YEL015W TY1B-DR4Q07793 1604 aa8.03□□□□□ -1.12
EDC3YEL015W GCN2P15442 1659 aa8.02□□□□□ -1.12
EDC3YEL015W CDC11P32458 415 aa8.02□□□□□ -1.13
EDC3YEL015W TSC11P40061 1430 aa8.02□□□□□ -1.13
EDC3YEL015W VID30P53076 958 aa8.02□□□□□ -1.13
EDC3YEL015W COG8Q04632 607 aa8.02□□□□□ -1.13
EDC3YEL015W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
EDC3YEL015W NUP159P40477 1460 aa8.02□□□□□ -1.13
EDC3YEL015W BDP1P46678 594 aa8.02□□□□□ -1.13
EDC3YEL015W SFI1Q12369 946 aa8.02□□□□□ -1.13
EDC3YEL015W SPT5P27692 1063 aaKnown RBP8.01□□□□□ -1.13
EDC3YEL015W YGL140CP53120 1219 aa8.01□□□□□ -1.13
EDC3YEL015W HSL1P34244 1518 aa8.01□□□□□ -1.13
EDC3YEL015W NDC80P40460 691 aa8□□□□□ -1.13
EDC3YEL015W STU2P46675 888 aa8□□□□□ -1.13
EDC3YEL015W PSE1P32337 1089 aaKnown RBP7.99□□□□□ -1.13
EDC3YEL015W RTT107P38850 1070 aa7.99□□□□□ -1.13
EDC3YEL015W RIO2P40160 425 aaKnown RBP7.99□□□□□ -1.13
EDC3YEL015W YMR1P47147 688 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
EDC3YEL015W YMR102CQ03177 834 aa7.99□□□□□ -1.13
EDC3YEL015W PDS5Q04264 1277 aa7.99□□□□□ -1.13
EDC3YEL015W NDL1Q06568 189 aa7.99□□□□□ -1.13
EDC3YEL015W NUP157P40064 1391 aaKnown RBP7.99□□□□□ -1.13
EDC3YEL015W SUP35P05453 685 aaKnown RBP7.98□□□□□ -1.13
EDC3YEL015W MCM2P29469 868 aa7.98□□□□□ -1.13
EDC3YEL015W SUB1P54000 292 aaKnown RBP7.98□□□□□ -1.13
EDC3YEL015W HAP5Q02516 242 aa7.98□□□□□ -1.13
EDC3YEL015W SML1Q04964 104 aa7.98□□□□□ -1.13
EDC3YEL015W YOR389WQ08912 624 aa7.98□□□□□ -1.13
EDC3YEL015W TY1B-AO13527 1196 aaKnown RBP7.98□□□□□ -1.13
EDC3YEL015W PSO2P30620 661 aa7.98□□□□□ -1.13
EDC3YEL015W PUP2P32379 260 aa7.98□□□□□ -1.13
EDC3YEL015W CEP3P40969 608 aa7.98□□□□□ -1.13
EDC3YEL015W ORM2Q06144 216 aa7.98□□□□□ -1.13
EDC3YEL015W HSC82P15108 705 aaKnown RBP7.97□□□□□ -1.13
EDC3YEL015W NAB3P38996 802 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
EDC3YEL015W RKM3P38222 552 aa7.96□□□□□ -1.13
EDC3YEL015W MGA2P40578 1113 aa7.96□□□□□ -1.13
EDC3YEL015W NFI1Q12216 726 aa7.96□□□□□ -1.13
EDC3YEL015W SSK2P53599 1579 aa7.96□□□□□ -1.14
EDC3YEL015W YCF1P39109 1515 aaKnown RBP7.96□□□□□ -1.14
EDC3YEL015W TY4B-PA0A0B7P3V8 1104 aa7.95□□□□□ -1.14
EDC3YEL015W YKR023WP36119 530 aaKnown RBP7.95□□□□□ -1.14
EDC3YEL015W LEM3P42838 414 aa7.95□□□□□ -1.14
EDC3YEL015W MIC60P36112 540 aa7.95□□□□□ -1.14
EDC3YEL015W MPP10P47083 593 aaKnown RBP7.95□□□□□ -1.14
EDC3YEL015W GIN4Q12263 1142 aa7.95□□□□□ -1.14
EDC3YEL015W MCM1P11746 286 aa7.94□□□□□ -1.14
EDC3YEL015W HOS4P40480 1083 aa7.94□□□□□ -1.14
EDC3YEL015W IAH1P41734 238 aa7.94□□□□□ -1.14
EDC3YEL015W PBY1P38254 753 aa7.93□□□□□ -1.14
EDC3YEL015W VPS41P38959 992 aa7.93□□□□□ -1.14
EDC3YEL015W SEC9P40357 651 aa7.93□□□□□ -1.14
EDC3YEL015W AIM20P40451 204 aa7.93□□□□□ -1.14
EDC3YEL015W GGA1Q06336 557 aa7.93□□□□□ -1.14
EDC3YEL015W PEX19Q07418 342 aa7.92□□□□□ -1.14
EDC3YEL015W PDR5P33302 1511 aaKnown RBP7.92□□□□□ -1.14
EDC3YEL015W MRPL32P25348 183 aa7.92□□□□□ -1.14
EDC3YEL015W MSH1P25846 959 aa7.92□□□□□ -1.14
EDC3YEL015W MET5P47169 1442 aa7.91□□□□□ -1.14
EDC3YEL015W SNQ2P32568 1501 aaKnown RBP7.91□□□□□ -1.14
EDC3YEL015W CYC8P14922 966 aa7.91□□□□□ -1.14
EDC3YEL015W ARR1Q06596 294 aa7.91□□□□□ -1.14
EDC3YEL015W GLE1Q12315 538 aa7.91□□□□□ -1.14
EDC3YEL015W RAD50P12753 1312 aa7.9□□□□□ -1.14
EDC3YEL015W SLP1Q12232 587 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms