RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeastyeast

Gene SKP1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP1YDR328C PSK1P31374 1356 aa9.78□□□□□ -0.84
SKP1YDR328C CPS1P27614 576 aa9.78□□□□□ -0.84
SKP1YDR328C PPH3P32345 308 aa9.78□□□□□ -0.84
SKP1YDR328C PDS5Q04264 1277 aa9.74□□□□□ -0.85
SKP1YDR328C YML133CQ03099 1374 aa9.74□□□□□ -0.85
SKP1YDR328C YLL067CQ07888 1374 aa9.74□□□□□ -0.85
SKP1YDR328C YLL066CQ99208 1374 aa9.74□□□□□ -0.85
SKP1YDR328C FKH1P40466 484 aa9.73□□□□□ -0.85
SKP1YDR328C TY4B-HP0C2J7 1802 aa9.72□□□□□ -0.85
SKP1YDR328C TY4B-JP47024 1803 aa9.72□□□□□ -0.85
SKP1YDR328C SEC3P33332 1336 aaKnown RBP9.71□□□□□ -0.86
SKP1YDR328C RTG3P38165 486 aa9.69□□□□□ -0.86
SKP1YDR328C ADE6P38972 1358 aaKnown RBP9.69□□□□□ -0.86
SKP1YDR328C PTP3P40048 928 aa9.68□□□□□ -0.86
SKP1YDR328C LEU2P04173 364 aaPredicted RBP9.67□□□□□ -0.86
SKP1YDR328C RRP5Q05022 1729 aaKnown RBP9.65□□□□□ -0.86
SKP1YDR328C SPT7P35177 1332 aa9.65□□□□□ -0.86
SKP1YDR328C MTR4P47047 1073 aaKnown RBP9.65□□□□□ -0.86
SKP1YDR328C PRP43P53131 767 aaKnown RBP9.65□□□□□ -0.86
SKP1YDR328C PSD2P53037 1138 aaKnown RBP9.64□□□□□ -0.87
SKP1YDR328C NST1P53935 1240 aa9.61□□□□□ -0.87
SKP1YDR328C YIL177CP40434 1758 aa9.6□□□□□ -0.87
SKP1YDR328C YJL225CP40889 1758 aa9.6□□□□□ -0.87
SKP1YDR328C RPS24AP0CX31 135 aaKnown RBP9.58□□□□□ -0.88
SKP1YDR328C RPS24BP0CX32 135 aaKnown RBP9.58□□□□□ -0.88
SKP1YDR328C TAP42Q04372 366 aa9.58□□□□□ -0.88
SKP1YDR328C YRF1-2P40105 1681 aa9.58□□□□□ -0.88
SKP1YDR328C YEF3P16521 1044 aaKnown RBP9.57□□□□□ -0.88
SKP1YDR328C PDI1P17967 522 aaKnown RBP9.57□□□□□ -0.88
SKP1YDR328C CSE4P36012 229 aa9.57□□□□□ -0.88
SKP1YDR328C AUS1Q08409 1394 aa9.56□□□□□ -0.88
SKP1YDR328C PRP45P28004 379 aaPredicted RBP9.55□□□□□ -0.88
SKP1YDR328C YAH1Q12184 172 aaKnown RBP9.55□□□□□ -0.88
SKP1YDR328C PRP5P21372 849 aaPredicted RBP9.54□□□□□ -0.88
SKP1YDR328C GRX4P32642 244 aa9.53□□□□□ -0.88
SKP1YDR328C RTF1P53064 558 aa9.53□□□□□ -0.88
SKP1YDR328C URB1P34241 1764 aaKnown RBP9.52□□□□□ -0.88
SKP1YDR328C LEU3P08638 886 aa9.52□□□□□ -0.89
SKP1YDR328C TRK1P12685 1235 aa9.52□□□□□ -0.89
SKP1YDR328C REB1P21538 810 aa9.52□□□□□ -0.89
SKP1YDR328C ENP1P38333 483 aaKnown RBP9.52□□□□□ -0.89
SKP1YDR328C FKS3Q04952 1785 aa9.52□□□□□ -0.89
SKP1YDR328C IOC4Q04213 475 aa9.51□□□□□ -0.89
SKP1YDR328C HIM1Q06674 414 aa9.51□□□□□ -0.89
SKP1YDR328C ENT1Q12518 454 aa9.5□□□□□ -0.89
SKP1YDR328C MSB3P48566 633 aaPredicted RBP9.49□□□□□ -0.89
SKP1YDR328C APP1P53933 587 aa9.49□□□□□ -0.89
SKP1YDR328C GAS4Q08271 471 aa9.49□□□□□ -0.89
SKP1YDR328C KAR2P16474 682 aaKnown RBP9.48□□□□□ -0.89
SKP1YDR328C SLM3Q12093 417 aa9.48□□□□□ -0.89
SKP1YDR328C APC1P53886 1748 aa9.48□□□□□ -0.89
SKP1YDR328C YRF1-3P0CX14 1859 aa9.47□□□□□ -0.89
SKP1YDR328C YRF1-7P0CX15 1859 aa9.47□□□□□ -0.89
SKP1YDR328C YRF1-6P53819 1859 aa9.47□□□□□ -0.89
SKP1YDR328C DPS1P04802 557 aaKnown RBP9.47□□□□□ -0.89
SKP1YDR328C SNF2P22082 1703 aa9.47□□□□□ -0.89
SKP1YDR328C ENV9Q08651 330 aa9.46□□□□□ -0.9
SKP1YDR328C NSR1P27476 414 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
SKP1YDR328C RPO41P13433 1351 aaKnown RBP9.45□□□□□ -0.9
SKP1YDR328C TCB1Q12466 1186 aa9.44□□□□□ -0.9
SKP1YDR328C RSF2P46974 1380 aa9.43□□□□□ -0.9
SKP1YDR328C RRP46P53256 223 aaPredicted RBP9.43□□□□□ -0.9
SKP1YDR328C XKS1P42826 600 aa9.39□□□□□ -0.91
SKP1YDR328C PAP2P53632 584 aaKnown RBP9.39□□□□□ -0.91
SKP1YDR328C IMH1Q06704 911 aaKnown RBP9.39□□□□□ -0.91
SKP1YDR328C YRF1-4O13559 1382 aa9.37□□□□□ -0.91
SKP1YDR328C IES2P40154 320 aa9.37□□□□□ -0.91
SKP1YDR328C YIL055CP40523 627 aaKnown RBP9.37□□□□□ -0.91
SKP1YDR328C SIR4P11978 1358 aa9.37□□□□□ -0.91
SKP1YDR328C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
SKP1YDR328C RPP0P05317 312 aaKnown RBP9.35□□□□□ -0.91
SKP1YDR328C PRS1P32895 427 aaKnown RBP9.35□□□□□ -0.91
SKP1YDR328C AKL1P38080 1108 aaKnown RBP9.35□□□□□ -0.91
SKP1YDR328C RCR1P38212 213 aa9.35□□□□□ -0.91
SKP1YDR328C RTR1P40084 226 aaPredicted RBP9.35□□□□□ -0.91
SKP1YDR328C DSD1P53095 428 aa9.35□□□□□ -0.91
SKP1YDR328C PRD1P25375 712 aa9.34□□□□□ -0.91
SKP1YDR328C YDL144CQ07589 356 aa9.34□□□□□ -0.91
SKP1YDR328C MPP10P47083 593 aaKnown RBP9.33□□□□□ -0.92
SKP1YDR328C ROM2P51862 1356 aaKnown RBP9.32□□□□□ -0.92
SKP1YDR328C VPS27P40343 622 aaKnown RBP9.31□□□□□ -0.92
SKP1YDR328C CTF4Q01454 927 aa9.31□□□□□ -0.92
SKP1YDR328C HSP104P31539 908 aaKnown RBP9.3□□□□□ -0.92
SKP1YDR328C THI22Q06490 572 aa9.3□□□□□ -0.92
SKP1YDR328C NTH2P35172 780 aa9.29□□□□□ -0.92
SKP1YDR328C YKL133CP36066 463 aa9.29□□□□□ -0.92
SKP1YDR328C DOT5P40553 215 aa9.29□□□□□ -0.92
SKP1YDR328C CDC45Q08032 650 aa9.28□□□□□ -0.92
SKP1YDR328C YNL050CP53952 270 aa9.27□□□□□ -0.93
SKP1YDR328C ADE16P54113 591 aaKnown RBP9.27□□□□□ -0.93
SKP1YDR328C MEC3Q02574 474 aa9.27□□□□□ -0.93
SKP1YDR328C INP54Q08227 384 aaKnown RBP9.27□□□□□ -0.93
SKP1YDR328C SUI2P20459 304 aaKnown RBP9.26□□□□□ -0.93
SKP1YDR328C SAP155P43612 1002 aa9.26□□□□□ -0.93
SKP1YDR328C HEF3P53978 1044 aaKnown RBP9.26□□□□□ -0.93
SKP1YDR328C FOX2Q02207 900 aaKnown RBP9.26□□□□□ -0.93
SKP1YDR328C AOS1Q06624 347 aa9.26□□□□□ -0.93
SKP1YDR328C RIM15P43565 1770 aa9.26□□□□□ -0.93
SKP1YDR328C NUP145P49687 1317 aa9.26□□□□□ -0.93
SKP1YDR328C GLN1P32288 370 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms