RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YNL115CP53925 644 aa7.57□□□□□ -1.2
NUP42YDR192C HAP5Q02516 242 aa7.57□□□□□ -1.2
NUP42YDR192C RAD59Q12223 238 aa7.57□□□□□ -1.2
NUP42YDR192C ESS1P22696 170 aa7.56□□□□□ -1.2
NUP42YDR192C RPL34BP40525 121 aaKnown RBP7.56□□□□□ -1.2
NUP42YDR192C YJL007CP47080 104 aa7.56□□□□□ -1.2
NUP42YDR192C TY1B-DR4Q07793 1604 aa7.56□□□□□ -1.2
NUP42YDR192C ARH1P48360 493 aa7.55□□□□□ -1.2
NUP42YDR192C LAM6Q08001 693 aa7.55□□□□□ -1.2
NUP42YDR192C SLY41P22215 453 aa7.54□□□□□ -1.2
NUP42YDR192C SIS1P25294 352 aaKnown RBP7.54□□□□□ -1.2
NUP42YDR192C NUD1P32336 851 aa7.54□□□□□ -1.2
NUP42YDR192C BIM1P40013 344 aa7.54□□□□□ -1.2
NUP42YDR192C ARG8P18544 423 aa7.53□□□□□ -1.2
NUP42YDR192C SAP30P38429 201 aa7.53□□□□□ -1.2
NUP42YDR192C SCJ1P25303 377 aa7.52□□□□□ -1.21
NUP42YDR192C SPT5P27692 1063 aaKnown RBP7.52□□□□□ -1.21
NUP42YDR192C SPA2P23201 1466 aaKnown RBP7.51□□□□□ -1.21
NUP42YDR192C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
NUP42YDR192C BNI4P53858 892 aa7.51□□□□□ -1.21
NUP42YDR192C SGS1P35187 1447 aa7.5□□□□□ -1.21
NUP42YDR192C YJU3P28321 313 aa7.49□□□□□ -1.21
NUP42YDR192C ATG32P40458 529 aa7.49□□□□□ -1.21
NUP42YDR192C PUS6P53294 404 aa7.48□□□□□ -1.21
NUP42YDR192C TBF1Q02457 562 aa7.48□□□□□ -1.21
NUP42YDR192C ELP4Q02884 456 aaKnown RBP7.48□□□□□ -1.21
NUP42YDR192C TIF1P10081 395 aaKnown RBP7.47□□□□□ -1.21
NUP42YDR192C KEX2P13134 814 aa7.47□□□□□ -1.21
NUP42YDR192C SPT23P35210 1082 aa7.47□□□□□ -1.21
NUP42YDR192C RSC30P38781 883 aa7.47□□□□□ -1.21
NUP42YDR192C AIR2Q12476 344 aaKnown RBP7.47□□□□□ -1.21
NUP42YDR192C MAK16P10962 306 aaPredicted RBP7.46□□□□□ -1.22
NUP42YDR192C BIO2P32451 375 aa7.46□□□□□ -1.22
NUP42YDR192C TCB3Q03640 1545 aaKnown RBP7.46□□□□□ -1.22
NUP42YDR192C PDR1P12383 1068 aa7.45□□□□□ -1.22
NUP42YDR192C TRM1P15565 570 aaKnown RBP7.45□□□□□ -1.22
NUP42YDR192C PTC2P39966 464 aaKnown RBP7.45□□□□□ -1.22
NUP42YDR192C SIS2P36024 562 aa7.44□□□□□ -1.22
NUP42YDR192C NAF1P53919 492 aaKnown RBP7.44□□□□□ -1.22
NUP42YDR192C SSA4P22202 642 aaKnown RBP7.43□□□□□ -1.22
NUP42YDR192C YPP1P46951 817 aa7.43□□□□□ -1.22
NUP42YDR192C YJL171CP46992 396 aa7.43□□□□□ -1.22
NUP42YDR192C STR2P47164 639 aa7.43□□□□□ -1.22
NUP42YDR192C ISM1P48526 1002 aa7.43□□□□□ -1.22
NUP42YDR192C BMT6Q12291 365 aa7.43□□□□□ -1.22
NUP42YDR192C GCD11P32481 527 aaKnown RBP7.42□□□□□ -1.22
NUP42YDR192C RTG2P32608 588 aaKnown RBP7.42□□□□□ -1.22
NUP42YDR192C SUP45P12385 437 aaKnown RBP7.41□□□□□ -1.22
NUP42YDR192C PAT1P25644 796 aaKnown RBP7.41□□□□□ -1.22
NUP42YDR192C YNL108CP53929 270 aa7.41□□□□□ -1.22
NUP42YDR192C PRE3P38624 215 aa7.4□□□□□ -1.22
NUP42YDR192C YML082WQ04533 649 aaKnown RBP7.4□□□□□ -1.22
NUP42YDR192C ERF2Q06551 359 aa7.4□□□□□ -1.22
NUP42YDR192C SSA1P10591 642 aaKnown RBP7.39□□□□□ -1.23
NUP42YDR192C RAM1P22007 431 aa7.39□□□□□ -1.23
NUP42YDR192C YPR204WQ08995 1032 aa7.39□□□□□ -1.23
NUP42YDR192C CHL1P22516 861 aaPredicted RBP7.38□□□□□ -1.23
NUP42YDR192C RPA14P50106 137 aa7.38□□□□□ -1.23
NUP42YDR192C PRT1P06103 763 aaKnown RBP7.37□□□□□ -1.23
NUP42YDR192C TUB4P53378 473 aa7.37□□□□□ -1.23
NUP42YDR192C SUB2Q07478 446 aaKnown RBP7.37□□□□□ -1.23
NUP42YDR192C BUD20Q08004 166 aaPredicted RBP7.37□□□□□ -1.23
NUP42YDR192C ALR1Q08269 859 aa7.37□□□□□ -1.23
NUP42YDR192C YDL206WQ12424 762 aa7.37□□□□□ -1.23
NUP42YDR192C ERG12P07277 443 aa7.36□□□□□ -1.23
NUP42YDR192C YDR344CQ05510 147 aa7.36□□□□□ -1.23
NUP42YDR192C TY1A-DR4O74302 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-HP0C2I4 478 aaKnown RBP7.35□□□□□ -1.23
NUP42YDR192C TY1A-AP0CX57 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-PR1P0CX58 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-ORP0CX59 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-PR2P0CX60 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-DR5P0CX65 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-ER2P0CX66 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-GR3P0CX67 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-LR1P0CX68 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-MR2P0CX69 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-JR2P47099 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-DR1Q03856 440 aa7.35□□□□□ -1.23
NUP42YDR192C AGE1Q04412 482 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-ML1Q04706 440 aaKnown RBP7.35□□□□□ -1.23
NUP42YDR192C TY1A-BRQ12217 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-NL2Q12470 440 aa7.35□□□□□ -1.23
NUP42YDR192C TY1A-GR2Q12485 440 aa7.35□□□□□ -1.23
NUP42YDR192C ENO2P00925 437 aaKnown RBP7.34□□□□□ -1.23
NUP42YDR192C SEC2P17065 759 aa7.34□□□□□ -1.23
NUP42YDR192C YDJ1P25491 409 aaKnown RBP7.34□□□□□ -1.23
NUP42YDR192C TTI1P36097 1038 aa7.34□□□□□ -1.23
NUP42YDR192C RIM21P48565 533 aa7.34□□□□□ -1.23
NUP42YDR192C KXD1P53158 218 aa7.34□□□□□ -1.23
NUP42YDR192C YPR097WQ06839 1073 aa7.34□□□□□ -1.23
NUP42YDR192C SAS4Q04003 481 aa7.33□□□□□ -1.24
NUP42YDR192C GEF1P37020 779 aa7.32□□□□□ -1.24
NUP42YDR192C MRX12P47084 519 aa7.32□□□□□ -1.24
NUP42YDR192C SPT16P32558 1035 aaKnown RBP7.31□□□□□ -1.24
NUP42YDR192C RRN7P40992 514 aa7.31□□□□□ -1.24
NUP42YDR192C MCM16Q12262 181 aa7.31□□□□□ -1.24
NUP42YDR192C ENO1P00924 437 aaKnown RBP7.3□□□□□ -1.24
NUP42YDR192C CPS1P27614 576 aa7.3□□□□□ -1.24
NUP42YDR192C ATG3P40344 310 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms