RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YLL066CQ99208 1374 aa16.04■□□□□ 0.16
PTP1YDL230W MAK10Q02197 733 aa16.04■□□□□ 0.16
PTP1YDL230W ABP1P15891 592 aaKnown RBP16.02■□□□□ 0.16
PTP1YDL230W RCM1P53972 490 aa16.01■□□□□ 0.15
PTP1YDL230W CFT1Q06632 1357 aaKnown RBP16■□□□□ 0.15
PTP1YDL230W TRK1P12685 1235 aa15.99■□□□□ 0.15
PTP1YDL230W YEF3P16521 1044 aaKnown RBP15.99■□□□□ 0.15
PTP1YDL230W PPH3P32345 308 aa15.98■□□□□ 0.15
PTP1YDL230W MIF2P35201 549 aa15.96■□□□□ 0.15
PTP1YDL230W PSK1P31374 1356 aa15.92■□□□□ 0.14
PTP1YDL230W USO1P25386 1790 aa15.9■□□□□ 0.14
PTP1YDL230W YNR029CP53729 429 aaKnown RBP15.89■□□□□ 0.13
PTP1YDL230W FUN12P39730 1002 aaKnown RBP15.88■□□□□ 0.13
PTP1YDL230W YDL144CQ07589 356 aa15.85■□□□□ 0.13
PTP1YDL230W CPS1P27614 576 aa15.84■□□□□ 0.13
PTP1YDL230W SNF2P22082 1703 aa15.84■□□□□ 0.13
PTP1YDL230W VPS27P40343 622 aaKnown RBP15.82■□□□□ 0.12
PTP1YDL230W RPP0P05317 312 aaKnown RBP15.81■□□□□ 0.12
PTP1YDL230W CDC45Q08032 650 aa15.81■□□□□ 0.12
PTP1YDL230W RVB2Q12464 471 aaKnown RBP15.8■□□□□ 0.12
PTP1YDL230W TY1B-NL2Q99337 1749 aaKnown RBP15.8■□□□□ 0.12
PTP1YDL230W LEU2P04173 364 aaPredicted RBP15.79■□□□□ 0.12
PTP1YDL230W MPP10P47083 593 aaKnown RBP15.79■□□□□ 0.12
PTP1YDL230W RRP46P53256 223 aaPredicted RBP15.79■□□□□ 0.12
PTP1YDL230W IOC4Q04213 475 aa15.78■□□□□ 0.12
PTP1YDL230W HIM1Q06674 414 aa15.77■□□□□ 0.12
PTP1YDL230W KAR2P16474 682 aaKnown RBP15.76■□□□□ 0.11
PTP1YDL230W SUI2P20459 304 aaKnown RBP15.74■□□□□ 0.11
PTP1YDL230W TAP42Q04372 366 aa15.74■□□□□ 0.11
PTP1YDL230W AUS1Q08409 1394 aa15.74■□□□□ 0.11
PTP1YDL230W PDI1P17967 522 aaKnown RBP15.73■□□□□ 0.11
PTP1YDL230W RTR1P40084 226 aaPredicted RBP15.72■□□□□ 0.11
PTP1YDL230W MTR4P47047 1073 aaKnown RBP15.72■□□□□ 0.11
PTP1YDL230W RPS24AP0CX31 135 aaKnown RBP15.69■□□□□ 0.1
PTP1YDL230W RPS24BP0CX32 135 aaKnown RBP15.69■□□□□ 0.1
PTP1YDL230W PAP2P53632 584 aaKnown RBP15.69■□□□□ 0.1
PTP1YDL230W CSE4P36012 229 aa15.68■□□□□ 0.1
PTP1YDL230W RTF1P53064 558 aa15.68■□□□□ 0.1
PTP1YDL230W GAS4Q08271 471 aa15.65■□□□□ 0.1
PTP1YDL230W ADE6P38972 1358 aaKnown RBP15.64■□□□□ 0.09
PTP1YDL230W SAP155P43612 1002 aa15.64■□□□□ 0.09
PTP1YDL230W GRX4P32642 244 aa15.63■□□□□ 0.09
PTP1YDL230W TY4B-HP0C2J7 1802 aa15.62■□□□□ 0.09
PTP1YDL230W TY4B-JP47024 1803 aa15.62■□□□□ 0.09
PTP1YDL230W THI22Q06490 572 aa15.62■□□□□ 0.09
PTP1YDL230W PRD1P25375 712 aa15.61■□□□□ 0.09
PTP1YDL230W THI12P42883 340 aa15.61■□□□□ 0.09
PTP1YDL230W THI5P43534 340 aa15.61■□□□□ 0.09
PTP1YDL230W THI11P47183 340 aa15.61■□□□□ 0.09
PTP1YDL230W PRP43P53131 767 aaKnown RBP15.61■□□□□ 0.09
PTP1YDL230W YMR196WQ04336 1088 aa15.61■□□□□ 0.09
PTP1YDL230W THI13Q07748 340 aa15.61■□□□□ 0.09
PTP1YDL230W TPD3P31383 635 aa15.6■□□□□ 0.09
PTP1YDL230W DPS1P04802 557 aaKnown RBP15.58■□□□□ 0.08
PTP1YDL230W YRB30P53107 440 aaPredicted RBP15.56■□□□□ 0.08
PTP1YDL230W BUB1P41695 1021 aaKnown RBP RIP-Chip data15.54■□□□□ 0.08not detected
PTP1YDL230W HEF3P53978 1044 aaKnown RBP15.54■□□□□ 0.08
PTP1YDL230W NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.54■□□□□ 0.08not detected
PTP1YDL230W YIL177CP40434 1758 aa15.54■□□□□ 0.08
PTP1YDL230W YJL225CP40889 1758 aa15.54■□□□□ 0.08
PTP1YDL230W RPO41P13433 1351 aaKnown RBP15.53■□□□□ 0.08
PTP1YDL230W RTT109Q07794 436 aa15.53■□□□□ 0.08
PTP1YDL230W RRP5Q05022 1729 aaKnown RBP15.51■□□□□ 0.07
PTP1YDL230W FPR3P38911 411 aaKnown RBP15.49■□□□□ 0.07
PTP1YDL230W TFA1P36100 482 aa15.47■□□□□ 0.07
PTP1YDL230W DAL5P15365 543 aa15.46■□□□□ 0.07
PTP1YDL230W AKL1P38080 1108 aaKnown RBP15.46■□□□□ 0.07
PTP1YDL230W YRF1-2P40105 1681 aa15.46■□□□□ 0.07
PTP1YDL230W APC1P53886 1748 aa15.45■□□□□ 0.06
PTP1YDL230W YIL092WP40497 633 aa15.44■□□□□ 0.06
PTP1YDL230W RAD2P07276 1031 aa15.43■□□□□ 0.06
PTP1YDL230W YRF1-4O13559 1382 aa15.43■□□□□ 0.06
PTP1YDL230W RPC31P17890 251 aa15.42■□□□□ 0.06
PTP1YDL230W DSD1P53095 428 aa15.4■□□□□ 0.06
PTP1YDL230W URB1P34241 1764 aaKnown RBP15.39■□□□□ 0.05
PTP1YDL230W SIR4P11978 1358 aa15.39■□□□□ 0.05
PTP1YDL230W FKS3Q04952 1785 aa15.37■□□□□ 0.05
PTP1YDL230W YFR006WP43590 535 aa15.37■□□□□ 0.05
PTP1YDL230W PRP5P21372 849 aaPredicted RBP15.36■□□□□ 0.05
PTP1YDL230W PRP45P28004 379 aaPredicted RBP15.35■□□□□ 0.05
PTP1YDL230W NTH2P35172 780 aa15.34■□□□□ 0.05
PTP1YDL230W RRT14P40470 206 aa15.33■□□□□ 0.04
PTP1YDL230W POL32P47110 350 aa15.33■□□□□ 0.04
PTP1YDL230W YNL050CP53952 270 aa15.33■□□□□ 0.04
PTP1YDL230W BUD27P43573 796 aaKnown RBP RIP-Chip data15.32■□□□□ 0.04not detected
PTP1YDL230W MSB3P48566 633 aaPredicted RBP15.32■□□□□ 0.04
PTP1YDL230W HSP104P31539 908 aaKnown RBP15.31■□□□□ 0.04
PTP1YDL230W SLM3Q12093 417 aa15.31■□□□□ 0.04
PTP1YDL230W MAK21Q12176 1025 aaKnown RBP15.31■□□□□ 0.04
PTP1YDL230W YBR287WP38355 427 aa15.3■□□□□ 0.04
PTP1YDL230W GYP7P48365 746 aa15.3■□□□□ 0.04
PTP1YDL230W ZDS1P50111 915 aaKnown RBP15.29■□□□□ 0.04
PTP1YDL230W PTP3P40048 928 aa15.28■□□□□ 0.04
PTP1YDL230W PUF6Q04373 656 aaKnown RBP15.27■□□□□ 0.04
PTP1YDL230W MAM1P40065 302 aa15.24■□□□□ 0.03
PTP1YDL230W SRT1Q03175 343 aa15.24■□□□□ 0.03
PTP1YDL230W TRP5P00931 707 aaKnown RBP15.23■□□□□ 0.03
PTP1YDL230W XKS1P42826 600 aa15.23■□□□□ 0.03
PTP1YDL230W AOS1Q06624 347 aa15.23■□□□□ 0.03
PTP1YDL230W RCR1P38212 213 aa15.21■□□□□ 0.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms