RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W NST1P53935 1240 aa10.04□□□□□ -0.8
NDE2YDL085W DNF3Q12674 1656 aa10.03□□□□□ -0.8
NDE2YDL085W YRB30P53107 440 aaPredicted RBP10.01□□□□□ -0.81
NDE2YDL085W PSK1P31374 1356 aa9.99□□□□□ -0.81
NDE2YDL085W RIA1P53893 1110 aa9.99□□□□□ -0.81
NDE2YDL085W KRE5P22023 1365 aa9.98□□□□□ -0.81
NDE2YDL085W MAK10Q02197 733 aa9.98□□□□□ -0.81
NDE2YDL085W YDL144CQ07589 356 aa9.95□□□□□ -0.82
NDE2YDL085W RCM1P53972 490 aa9.94□□□□□ -0.82
NDE2YDL085W TAP42Q04372 366 aa9.94□□□□□ -0.82
NDE2YDL085W LEU2P04173 364 aaPredicted RBP9.93□□□□□ -0.82
NDE2YDL085W YEF3P16521 1044 aaKnown RBP9.93□□□□□ -0.82
NDE2YDL085W PDI1P17967 522 aaKnown RBP9.93□□□□□ -0.82
NDE2YDL085W FPR3P38911 411 aaKnown RBP9.93□□□□□ -0.82
NDE2YDL085W RTF1P53064 558 aa9.93□□□□□ -0.82
NDE2YDL085W YML133CQ03099 1374 aa9.93□□□□□ -0.82
NDE2YDL085W YLL067CQ07888 1374 aa9.93□□□□□ -0.82
NDE2YDL085W YLL066CQ99208 1374 aa9.93□□□□□ -0.82
NDE2YDL085W TRK1P12685 1235 aa9.93□□□□□ -0.82
NDE2YDL085W KAR2P16474 682 aaKnown RBP9.93□□□□□ -0.82
NDE2YDL085W GRX4P32642 244 aa9.92□□□□□ -0.82
NDE2YDL085W MTR4P47047 1073 aaKnown RBP9.92□□□□□ -0.82
NDE2YDL085W SNF2P22082 1703 aa9.92□□□□□ -0.82
NDE2YDL085W TY1B-NL2Q99337 1749 aaKnown RBP9.92□□□□□ -0.82
NDE2YDL085W RVB2Q12464 471 aaKnown RBP9.91□□□□□ -0.82
NDE2YDL085W CPS1P27614 576 aa9.9□□□□□ -0.82
NDE2YDL085W ABP1P15891 592 aaKnown RBP9.89□□□□□ -0.83
NDE2YDL085W PPH3P32345 308 aa9.89□□□□□ -0.83
NDE2YDL085W YNR029CP53729 429 aaKnown RBP9.89□□□□□ -0.83
NDE2YDL085W FUN12P39730 1002 aaKnown RBP9.88□□□□□ -0.83
NDE2YDL085W RTR1P40084 226 aaPredicted RBP9.88□□□□□ -0.83
NDE2YDL085W RPC31P17890 251 aa9.86□□□□□ -0.83
NDE2YDL085W MPP10P47083 593 aaKnown RBP9.85□□□□□ -0.83
NDE2YDL085W PAP2P53632 584 aaKnown RBP9.85□□□□□ -0.83
NDE2YDL085W SUI2P20459 304 aaKnown RBP9.84□□□□□ -0.83
NDE2YDL085W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.84□□□□□ -0.83not detected
NDE2YDL085W YMR196WQ04336 1088 aa9.84□□□□□ -0.83
NDE2YDL085W PRP43P53131 767 aaKnown RBP9.82□□□□□ -0.84
NDE2YDL085W USO1P25386 1790 aa9.81□□□□□ -0.84
NDE2YDL085W RAD2P07276 1031 aa9.81□□□□□ -0.84
NDE2YDL085W PRD1P25375 712 aa9.81□□□□□ -0.84
NDE2YDL085W BUD27P43573 796 aaKnown RBP RIP-Chip data9.81□□□□□ -0.84not detected
NDE2YDL085W RRP46P53256 223 aaPredicted RBP9.81□□□□□ -0.84
NDE2YDL085W CSE4P36012 229 aa9.79□□□□□ -0.84
NDE2YDL085W SAP155P43612 1002 aa9.79□□□□□ -0.84
NDE2YDL085W HIM1Q06674 414 aa9.79□□□□□ -0.84
NDE2YDL085W RPO41P13433 1351 aaKnown RBP9.79□□□□□ -0.84
NDE2YDL085W ADE6P38972 1358 aaKnown RBP9.79□□□□□ -0.84
NDE2YDL085W AUS1Q08409 1394 aa9.77□□□□□ -0.85
NDE2YDL085W EBP2P36049 427 aaKnown RBP9.77□□□□□ -0.85
NDE2YDL085W MAK21Q12176 1025 aaKnown RBP9.77□□□□□ -0.85
NDE2YDL085W IME2P32581 645 aa9.76□□□□□ -0.85
NDE2YDL085W RPS24AP0CX31 135 aaKnown RBP9.75□□□□□ -0.85
NDE2YDL085W RPS24BP0CX32 135 aaKnown RBP9.75□□□□□ -0.85
NDE2YDL085W TPD3P31383 635 aa9.75□□□□□ -0.85
NDE2YDL085W CAB3P36076 571 aa9.75□□□□□ -0.85
NDE2YDL085W SIR4P11978 1358 aa9.75□□□□□ -0.85
NDE2YDL085W THI22Q06490 572 aa9.74□□□□□ -0.85
NDE2YDL085W DPS1P04802 557 aaKnown RBP9.73□□□□□ -0.85
NDE2YDL085W OPY1P38271 328 aa9.73□□□□□ -0.85
NDE2YDL085W YFR016CP43597 1233 aaKnown RBP9.73□□□□□ -0.85
NDE2YDL085W GAS4Q08271 471 aa9.73□□□□□ -0.85
NDE2YDL085W YRF1-4O13559 1382 aa9.73□□□□□ -0.85
NDE2YDL085W EAF7P53911 425 aaKnown RBP9.72□□□□□ -0.85
NDE2YDL085W HEF3P53978 1044 aaKnown RBP9.71□□□□□ -0.85
NDE2YDL085W APC1P53886 1748 aa9.71□□□□□ -0.86
NDE2YDL085W CLC1P17891 233 aa9.69□□□□□ -0.86
NDE2YDL085W AKL1P38080 1108 aaKnown RBP9.69□□□□□ -0.86
NDE2YDL085W YIL092WP40497 633 aa9.69□□□□□ -0.86
NDE2YDL085W YIR014WP40570 242 aa9.69□□□□□ -0.86
NDE2YDL085W RTT109Q07794 436 aa9.68□□□□□ -0.86
NDE2YDL085W MAM1P40065 302 aa9.67□□□□□ -0.86
NDE2YDL085W YNL050CP53952 270 aa9.67□□□□□ -0.86
NDE2YDL085W DAL5P15365 543 aa9.67□□□□□ -0.86
NDE2YDL085W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
NDE2YDL085W THI12P42883 340 aa9.65□□□□□ -0.86
NDE2YDL085W THI5P43534 340 aa9.65□□□□□ -0.86
NDE2YDL085W THI11P47183 340 aa9.65□□□□□ -0.86
NDE2YDL085W GYP7P48365 746 aa9.65□□□□□ -0.86
NDE2YDL085W ZDS1P50111 915 aaKnown RBP9.65□□□□□ -0.86
NDE2YDL085W CTF4Q01454 927 aa9.65□□□□□ -0.86
NDE2YDL085W THI13Q07748 340 aa9.65□□□□□ -0.86
NDE2YDL085W DSD1P53095 428 aa9.64□□□□□ -0.87
NDE2YDL085W YRF1-2P40105 1681 aa9.64□□□□□ -0.87
NDE2YDL085W POL32P47110 350 aa9.64□□□□□ -0.87
NDE2YDL085W YPR148CQ06523 435 aa9.64□□□□□ -0.87
NDE2YDL085W TY4B-HP0C2J7 1802 aa9.63□□□□□ -0.87
NDE2YDL085W TY4B-JP47024 1803 aa9.63□□□□□ -0.87
NDE2YDL085W EDE1P34216 1381 aa9.62□□□□□ -0.87
NDE2YDL085W NTH2P35172 780 aa9.61□□□□□ -0.87
NDE2YDL085W ECM16Q04217 1267 aaKnown RBP9.61□□□□□ -0.87
NDE2YDL085W AOS1Q06624 347 aa9.6□□□□□ -0.87
NDE2YDL085W PRP5P21372 849 aaPredicted RBP9.6□□□□□ -0.87
NDE2YDL085W HSP104P31539 908 aaKnown RBP9.59□□□□□ -0.87
NDE2YDL085W RRT14P40470 206 aa9.59□□□□□ -0.87
NDE2YDL085W PUF6Q04373 656 aaKnown RBP9.59□□□□□ -0.87
NDE2YDL085W SNF7P39929 240 aaKnown RBP9.58□□□□□ -0.88
NDE2YDL085W SLM3Q12093 417 aa9.57□□□□□ -0.88
NDE2YDL085W UGA3P26370 528 aa9.56□□□□□ -0.88
NDE2YDL085W NSE3Q05541 303 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms