RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W NUD1P32336 851 aa6.9□□□□□ -1.3
UBC9YDL064W ISM1P48526 1002 aa6.89□□□□□ -1.31
UBC9YDL064W RAM1P22007 431 aa6.88□□□□□ -1.31
UBC9YDL064W STR2P47164 639 aa6.88□□□□□ -1.31
UBC9YDL064W PKH3Q03306 898 aaPredicted RBP6.88□□□□□ -1.31
UBC9YDL064W BMT6Q12291 365 aa6.88□□□□□ -1.31
UBC9YDL064W BRL1P38770 471 aa6.87□□□□□ -1.31
UBC9YDL064W SLY41P22215 453 aa6.86□□□□□ -1.31
UBC9YDL064W YJL171CP46992 396 aa6.86□□□□□ -1.31
UBC9YDL064W HGH1P48362 394 aaKnown RBP6.86□□□□□ -1.31
UBC9YDL064W YNL115CP53925 644 aa6.86□□□□□ -1.31
UBC9YDL064W YPR015CQ12531 247 aa6.86□□□□□ -1.31
UBC9YDL064W SPT23P35210 1082 aa6.85□□□□□ -1.31
UBC9YDL064W BNI4P53858 892 aa6.85□□□□□ -1.31
UBC9YDL064W RAD59Q12223 238 aa6.84□□□□□ -1.31
UBC9YDL064W TY1A-DR4O74302 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-HP0C2I4 478 aaKnown RBP6.83□□□□□ -1.32
UBC9YDL064W TY1A-AP0CX57 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-PR1P0CX58 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-ORP0CX59 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-PR2P0CX60 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-DR5P0CX65 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-ER2P0CX66 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-GR3P0CX67 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-LR1P0CX68 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-MR2P0CX69 440 aa6.83□□□□□ -1.32
UBC9YDL064W PRE3P38624 215 aa6.83□□□□□ -1.32
UBC9YDL064W YJL007CP47080 104 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-JR2P47099 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-DR1Q03856 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-ML1Q04706 440 aaKnown RBP6.83□□□□□ -1.32
UBC9YDL064W BUD20Q08004 166 aaPredicted RBP6.83□□□□□ -1.32
UBC9YDL064W TY1A-BRQ12217 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-NL2Q12470 440 aa6.83□□□□□ -1.32
UBC9YDL064W TY1A-GR2Q12485 440 aa6.83□□□□□ -1.32
UBC9YDL064W SEC2P17065 759 aa6.82□□□□□ -1.32
UBC9YDL064W GCD11P32481 527 aaKnown RBP6.82□□□□□ -1.32
UBC9YDL064W NPL4P33755 580 aa6.82□□□□□ -1.32
UBC9YDL064W RSC30P38781 883 aa6.82□□□□□ -1.32
UBC9YDL064W BIM1P40013 344 aa6.82□□□□□ -1.32
UBC9YDL064W RLF2Q12495 606 aa6.82□□□□□ -1.32
UBC9YDL064W ARG8P18544 423 aa6.81□□□□□ -1.32
UBC9YDL064W PTC2P39966 464 aaKnown RBP6.81□□□□□ -1.32
UBC9YDL064W RTF1P53064 558 aa6.81□□□□□ -1.32
UBC9YDL064W YBL036CP38197 257 aa6.79□□□□□ -1.32
UBC9YDL064W ATG32P40458 529 aa6.79□□□□□ -1.32
UBC9YDL064W TRM1P15565 570 aaKnown RBP6.78□□□□□ -1.32
UBC9YDL064W CHL1P22516 861 aaPredicted RBP6.77□□□□□ -1.33
UBC9YDL064W AGE1Q04412 482 aa6.77□□□□□ -1.33
UBC9YDL064W YML082WQ04533 649 aaKnown RBP6.77□□□□□ -1.33
UBC9YDL064W BIO2P32451 375 aa6.76□□□□□ -1.33
UBC9YDL064W PUS6P53294 404 aa6.76□□□□□ -1.33
UBC9YDL064W TUB4P53378 473 aa6.76□□□□□ -1.33
UBC9YDL064W LAM6Q08001 693 aa6.75□□□□□ -1.33
UBC9YDL064W ERG12P07277 443 aa6.74□□□□□ -1.33
UBC9YDL064W PRT1P06103 763 aaKnown RBP6.73□□□□□ -1.33
UBC9YDL064W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
UBC9YDL064W YNL108CP53929 270 aa6.73□□□□□ -1.33
UBC9YDL064W TIF1P10081 395 aaKnown RBP6.72□□□□□ -1.33
UBC9YDL064W CSE4P36012 229 aa6.72□□□□□ -1.33
UBC9YDL064W PAC1P39946 494 aaKnown RBP6.72□□□□□ -1.33
UBC9YDL064W YDJ1P25491 409 aaKnown RBP6.71□□□□□ -1.34
UBC9YDL064W RRN7P40992 514 aa6.71□□□□□ -1.34
UBC9YDL064W MAK16P10962 306 aaPredicted RBP6.7□□□□□ -1.34
UBC9YDL064W YDL206WQ12424 762 aa6.7□□□□□ -1.34
UBC9YDL064W TBF1Q02457 562 aa6.69□□□□□ -1.34
UBC9YDL064W SUP45P12385 437 aaKnown RBP6.68□□□□□ -1.34
UBC9YDL064W ENO2P00925 437 aaKnown RBP6.66□□□□□ -1.34
UBC9YDL064W RTG2P32608 588 aaKnown RBP6.66□□□□□ -1.34
UBC9YDL064W RPL34BP40525 121 aaKnown RBP6.66□□□□□ -1.34
UBC9YDL064W GYP1Q08484 637 aa6.66□□□□□ -1.34
UBC9YDL064W YPR204WQ08995 1032 aa6.66□□□□□ -1.34
UBC9YDL064W PDC1P06169 563 aaKnown RBP6.65□□□□□ -1.34
UBC9YDL064W VRP1P37370 817 aa6.65□□□□□ -1.34
UBC9YDL064W RPA14P50106 137 aa6.65□□□□□ -1.34
UBC9YDL064W SPT16P32558 1035 aaKnown RBP6.64□□□□□ -1.35
UBC9YDL064W YPR097WQ06839 1073 aa6.63□□□□□ -1.35
UBC9YDL064W SDH2P21801 266 aa6.62□□□□□ -1.35
UBC9YDL064W ENO1P00924 437 aaKnown RBP6.61□□□□□ -1.35
UBC9YDL064W PAT1P25644 796 aaKnown RBP6.61□□□□□ -1.35
UBC9YDL064W SPT5P27692 1063 aaKnown RBP6.61□□□□□ -1.35
UBC9YDL064W ALR1Q08269 859 aa6.61□□□□□ -1.35
UBC9YDL064W MOD5P07884 428 aa6.6□□□□□ -1.35
UBC9YDL064W ISF1P32488 338 aa6.6□□□□□ -1.35
UBC9YDL064W FIG4P42837 879 aa6.6□□□□□ -1.35
UBC9YDL064W KXD1P53158 218 aa6.6□□□□□ -1.35
UBC9YDL064W SAS4Q04003 481 aa6.6□□□□□ -1.35
UBC9YDL064W CPS1P27614 576 aa6.59□□□□□ -1.35
UBC9YDL064W TTI1P36097 1038 aa6.59□□□□□ -1.35
UBC9YDL064W HXT10P43581 546 aa6.59□□□□□ -1.35
UBC9YDL064W NAF1P53919 492 aaKnown RBP6.59□□□□□ -1.35
UBC9YDL064W MRX10Q05648 414 aa6.59□□□□□ -1.35
UBC9YDL064W RIM21P48565 533 aa6.58□□□□□ -1.36
UBC9YDL064W ITT1Q04638 464 aa6.58□□□□□ -1.36
UBC9YDL064W MCM16Q12262 181 aa6.58□□□□□ -1.36
UBC9YDL064W BCK2P33306 851 aa6.56□□□□□ -1.36
UBC9YDL064W EMP47P43555 445 aa6.56□□□□□ -1.36
UBC9YDL064W YPR084WQ06821 456 aa6.56□□□□□ -1.36
UBC9YDL064W SUB2Q07478 446 aaKnown RBP6.56□□□□□ -1.36
UBC9YDL064W TEC1P18412 486 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms