RNA–Protein interactions for RNA: YDL008W

APC11, Transcript of Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC11, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC11	YDL008W	BBC1	P47068	1157 aa		4.69	□□□□□ -1.66
APC11	YDL008W	EPS1	P40557	701 aa		4.68	□□□□□ -1.66
APC11	YDL008W	CKB1	P43639	278 aa		4.68	□□□□□ -1.66
APC11	YDL008W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.68	□□□□□ -1.66
APC11	YDL008W	PDR12	Q02785	1511 aa		4.67	□□□□□ -1.66
APC11	YDL008W	RLF2	Q12495	606 aa		4.67	□□□□□ -1.66
APC11	YDL008W	YTA7	P40340	1379 aa		4.65	□□□□□ -1.66
APC11	YDL008W	STU1	P38198	1513 aa		4.65	□□□□□ -1.67
APC11	YDL008W	SSN2	P38931	1420 aa		4.64	□□□□□ -1.67
APC11	YDL008W	HAP1	P0CE41	1502 aa		4.64	□□□□□ -1.67
APC11	YDL008W	DSF2	P38213	736 aa		4.64	□□□□□ -1.67
APC11	YDL008W	PBS2	P08018	668 aa		4.63	□□□□□ -1.67
APC11	YDL008W	KIN1	P13185	1064 aa		4.63	□□□□□ -1.67
APC11	YDL008W	BDF1	P35817	686 aa		4.63	□□□□□ -1.67
APC11	YDL008W	YBT1	P32386	1661 aa		4.63	□□□□□ -1.67
APC11	YDL008W	SMC4	Q12267	1418 aa		4.63	□□□□□ -1.67
APC11	YDL008W	MAK11	P20484	414 aa	Known RBP	4.62	□□□□□ -1.67
APC11	YDL008W	SLX5	P32828	619 aa	Known RBP	4.62	□□□□□ -1.67
APC11	YDL008W	IFH1	P39520	1085 aa		4.62	□□□□□ -1.67
APC11	YDL008W	SCY1	P53009	804 aa		4.62	□□□□□ -1.67
APC11	YDL008W	SNQ2	P32568	1501 aa	Known RBP	4.62	□□□□□ -1.67
APC11	YDL008W	GLC3	P32775	704 aa		4.61	□□□□□ -1.67
APC11	YDL008W	RTG3	P38165	486 aa		4.61	□□□□□ -1.67
APC11	YDL008W	YOR1	P53049	1477 aa		4.61	□□□□□ -1.67
APC11	YDL008W	YNR021W	P53723	404 aa	Known RBP	4.6	□□□□□ -1.67
APC11	YDL008W	NUP157	P40064	1391 aa	Known RBP	4.59	□□□□□ -1.67
APC11	YDL008W	ENV9	Q08651	330 aa		4.59	□□□□□ -1.67
APC11	YDL008W	COQ8	P27697	501 aa		4.58	□□□□□ -1.68
APC11	YDL008W	VPS29	P38759	282 aa		4.58	□□□□□ -1.68
APC11	YDL008W	IES2	P40154	320 aa		4.58	□□□□□ -1.68
APC11	YDL008W	SEC7	P11075	2009 aa	Known RBP	4.58	□□□□□ -1.68
APC11	YDL008W	DIT2	P21595	489 aa		4.56	□□□□□ -1.68
APC11	YDL008W	MAM3	Q12296	706 aa		4.56	□□□□□ -1.68
APC11	YDL008W	BCK1	Q01389	1478 aa		4.56	□□□□□ -1.68
APC11	YDL008W	NUP188	P52593	1655 aa	Known RBP	4.55	□□□□□ -1.68
APC11	YDL008W	NUP42	P49686	430 aa	Known RBP	4.55	□□□□□ -1.68
APC11	YDL008W	EDS1	P38073	919 aa		4.54	□□□□□ -1.68
APC11	YDL008W	YBL086C	P38177	466 aa		4.54	□□□□□ -1.68
APC11	YDL008W	GUA1	P38625	525 aa	Known RBP	4.54	□□□□□ -1.68
APC11	YDL008W	RTT106	P40161	455 aa		4.54	□□□□□ -1.68
APC11	YDL008W	VMR1	P38735	1592 aa		4.53	□□□□□ -1.68
APC11	YDL008W	AIM7	Q12156	149 aa		4.53	□□□□□ -1.68
APC11	YDL008W	STS1	P38637	319 aa		4.52	□□□□□ -1.69
APC11	YDL008W	REF2	P42073	533 aa	Predicted RBP	4.52	□□□□□ -1.69
APC11	YDL008W	YRF1-2	P40105	1681 aa		4.51	□□□□□ -1.69
APC11	YDL008W	POL1	P13382	1468 aa		4.51	□□□□□ -1.69
APC11	YDL008W	UGA2	P38067	497 aa		4.51	□□□□□ -1.69
APC11	YDL008W	UBP1	P25037	809 aa		4.5	□□□□□ -1.69
APC11	YDL008W	URN1	Q06525	465 aa	Known RBP	4.5	□□□□□ -1.69
APC11	YDL008W	YBL029C-A	Q3E756	94 aa		4.5	□□□□□ -1.69
APC11	YDL008W	IML1	P47170	1584 aa		4.49	□□□□□ -1.69
APC11	YDL008W	PDR11	P40550	1411 aa		4.49	□□□□□ -1.69
APC11	YDL008W	TOM1	Q03280	3268 aa		4.48	□□□□□ -1.69
APC11	YDL008W	MAC1	P35192	417 aa		4.48	□□□□□ -1.69
APC11	YDL008W	YJL171C	P46992	396 aa		4.47	□□□□□ -1.69
APC11	YDL008W	GCN2	P15442	1659 aa		4.47	□□□□□ -1.69
APC11	YDL008W	SDH2	P21801	266 aa		4.46	□□□□□ -1.7
APC11	YDL008W	DBP1	P24784	617 aa	Known RBP	4.46	□□□□□ -1.7
APC11	YDL008W	GTT3	P39996	337 aa		4.46	□□□□□ -1.7
APC11	YDL008W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
APC11	YDL008W	TFB3	Q03290	321 aa		4.46	□□□□□ -1.7
APC11	YDL008W	IMH1	Q06704	911 aa	Known RBP	4.46	□□□□□ -1.7
APC11	YDL008W	STH1	P32597	1359 aa		4.45	□□□□□ -1.7
APC11	YDL008W	COX6	P00427	148 aa		4.45	□□□□□ -1.7
APC11	YDL008W	SSA4	P22202	642 aa	Known RBP	4.45	□□□□□ -1.7
APC11	YDL008W	PKC1	P24583	1151 aa		4.45	□□□□□ -1.7
APC11	YDL008W	ATF2	P53296	535 aa		4.45	□□□□□ -1.7
APC11	YDL008W	NOP53	Q12080	455 aa	Known RBP	4.45	□□□□□ -1.7
APC11	YDL008W	MAK21	Q12176	1025 aa	Known RBP	4.45	□□□□□ -1.7
APC11	YDL008W	ENT1	Q12518	454 aa		4.45	□□□□□ -1.7
APC11	YDL008W	PTC3	P34221	468 aa	Known RBP	4.44	□□□□□ -1.7
APC11	YDL008W	HGH1	P48362	394 aa	Known RBP	4.44	□□□□□ -1.7
APC11	YDL008W	YML020W	Q03722	664 aa		4.44	□□□□□ -1.7
APC11	YDL008W	VHR2	P40041	505 aa		4.43	□□□□□ -1.7
APC11	YDL008W	HPC2	Q01448	625 aa		4.43	□□□□□ -1.7
APC11	YDL008W	YDR090C	Q03193	310 aa		4.42	□□□□□ -1.7
APC11	YDL008W	SSA2	P10592	639 aa	Known RBP	4.41	□□□□□ -1.7
APC11	YDL008W	ALD2	P47771	506 aa		4.4	□□□□□ -1.71
APC11	YDL008W	YOR238W	Q08634	303 aa		4.4	□□□□□ -1.71
APC11	YDL008W	YPR117W	Q06116	2489 aa		4.4	□□□□□ -1.71
APC11	YDL008W	PDR5	P33302	1511 aa	Known RBP	4.4	□□□□□ -1.71
APC11	YDL008W	UBP14	P38237	781 aa	Known RBP	4.39	□□□□□ -1.71
APC11	YDL008W	VNX1	P42839	908 aa		4.39	□□□□□ -1.71
APC11	YDL008W	PEX21	P50091	288 aa		4.39	□□□□□ -1.71
APC11	YDL008W	DUS1	P53759	423 aa	Known RBP	4.39	□□□□□ -1.71
APC11	YDL008W	SPP1	Q03012	353 aa		4.39	□□□□□ -1.71
APC11	YDL008W	YLR326W	Q06170	240 aa	Known RBP	4.39	□□□□□ -1.71
APC11	YDL008W	PUS5	Q06244	254 aa		4.39	□□□□□ -1.71
APC11	YDL008W	PIB1	Q06651	286 aa		4.39	□□□□□ -1.71
APC11	YDL008W	SUB2	Q07478	446 aa	Known RBP	4.39	□□□□□ -1.71
APC11	YDL008W	NOP8	Q08287	484 aa	Predicted RBP	4.39	□□□□□ -1.71
APC11	YDL008W	ATG32	P40458	529 aa		4.38	□□□□□ -1.71
APC11	YDL008W	CTH1	P47976	325 aa		4.38	□□□□□ -1.71
APC11	YDL008W	GEF1	P37020	779 aa		4.37	□□□□□ -1.71
APC11	YDL008W	BRL1	P38770	471 aa		4.37	□□□□□ -1.71
APC11	YDL008W	BIM1	P40013	344 aa		4.37	□□□□□ -1.71
APC11	YDL008W	YJL007C	P47080	104 aa		4.37	□□□□□ -1.71
APC11	YDL008W	MST1	P07236	462 aa		4.36	□□□□□ -1.71
APC11	YDL008W	KTR1	P27810	393 aa	Known RBP	4.36	□□□□□ -1.71
APC11	YDL008W	RPN11	P43588	306 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms