RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YRF1-2P40105 1681 aa2.52□□□□□ -2.01
MSH3YCR092C GEA1P47102 1408 aaPredicted RBP2.52□□□□□ -2.01
MSH3YCR092C AI2P03876 854 aa2.51□□□□□ -2.01
MSH3YCR092C GBP2P25555 427 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
MSH3YCR092C YBL029C-AQ3E756 94 aa2.5□□□□□ -2.01
MSH3YCR092C GCN2P15442 1659 aa2.5□□□□□ -2.01
MSH3YCR092C BCK1Q01389 1478 aa2.49□□□□□ -2.01
MSH3YCR092C YFR006WP43590 535 aa2.49□□□□□ -2.01
MSH3YCR092C ULI1P43604 169 aa2.49□□□□□ -2.01
MSH3YCR092C YMR196WQ04336 1088 aa2.49□□□□□ -2.01
MSH3YCR092C SRB8P25648 1427 aa2.49□□□□□ -2.01
MSH3YCR092C VNX1P42839 908 aa2.48□□□□□ -2.01
MSH3YCR092C YSP2Q06681 1438 aa2.48□□□□□ -2.01
MSH3YCR092C EAP1P36041 632 aaKnown RBP2.48□□□□□ -2.01
MSH3YCR092C NUP157P40064 1391 aaKnown RBP2.48□□□□□ -2.01
MSH3YCR092C BMT6Q12291 365 aa2.48□□□□□ -2.01
MSH3YCR092C BNR1P40450 1375 aa2.47□□□□□ -2.01
MSH3YCR092C NUP192P47054 1683 aa2.47□□□□□ -2.01
MSH3YCR092C MRM1P25270 412 aa2.47□□□□□ -2.01
MSH3YCR092C YLR271WQ06152 274 aa2.47□□□□□ -2.01
MSH3YCR092C USO1P25386 1790 aa2.46□□□□□ -2.02
MSH3YCR092C SSP1P38871 571 aa2.46□□□□□ -2.02
MSH3YCR092C ELP4Q02884 456 aaKnown RBP2.45□□□□□ -2.02
MSH3YCR092C PSD2P53037 1138 aaKnown RBP2.45□□□□□ -2.02
MSH3YCR092C TIF11P38912 153 aaKnown RBP2.45□□□□□ -2.02
MSH3YCR092C SET4P42948 560 aa2.45□□□□□ -2.02
MSH3YCR092C RPP1BP10622 106 aaKnown RBP2.44□□□□□ -2.02
MSH3YCR092C IFH1P39520 1085 aa2.44□□□□□ -2.02
MSH3YCR092C YLL066CQ99208 1374 aa2.44□□□□□ -2.02
MSH3YCR092C ABP1P15891 592 aaKnown RBP2.43□□□□□ -2.02
MSH3YCR092C YAP3P38749 330 aa2.43□□□□□ -2.02
MSH3YCR092C ATH1P48016 1211 aa2.42□□□□□ -2.02
MSH3YCR092C DCW1P36091 449 aa2.42□□□□□ -2.02
MSH3YCR092C AIR2Q12476 344 aaKnown RBP2.42□□□□□ -2.02
MSH3YCR092C FKH1P40466 484 aa2.41□□□□□ -2.02
MSH3YCR092C TY3B-IQ7LHG5 1498 aaKnown RBP2.41□□□□□ -2.02
MSH3YCR092C GYP5Q12344 894 aa2.4□□□□□ -2.02
MSH3YCR092C RTG3P38165 486 aa2.4□□□□□ -2.03
MSH3YCR092C MAK10Q02197 733 aa2.4□□□□□ -2.03
MSH3YCR092C IOC2Q12072 812 aa2.4□□□□□ -2.03
MSH3YCR092C NCR1Q12200 1170 aa2.4□□□□□ -2.03
MSH3YCR092C RTG1P32607 177 aa2.39□□□□□ -2.03
MSH3YCR092C KIC1P38692 1080 aa2.39□□□□□ -2.03
MSH3YCR092C LDB19Q12502 818 aa2.39□□□□□ -2.03
MSH3YCR092C RRP5Q05022 1729 aaKnown RBP2.39□□□□□ -2.03
MSH3YCR092C HTA1P04911 132 aaKnown RBP2.38□□□□□ -2.03
MSH3YCR092C HTA2P04912 132 aa2.38□□□□□ -2.03
MSH3YCR092C SCT1P32784 759 aa2.38□□□□□ -2.03
MSH3YCR092C MSB4Q12317 492 aa2.38□□□□□ -2.03
MSH3YCR092C SAP30P38429 201 aa2.38□□□□□ -2.03
MSH3YCR092C PEX21P50091 288 aa2.38□□□□□ -2.03
MSH3YCR092C DBP1P24784 617 aaKnown RBP2.38□□□□□ -2.03
MSH3YCR092C YMR1P47147 688 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
MSH3YCR092C VPS29P38759 282 aa2.37□□□□□ -2.03
MSH3YCR092C RTT106P40161 455 aa2.37□□□□□ -2.03
MSH3YCR092C MGA2P40578 1113 aa2.37□□□□□ -2.03
MSH3YCR092C CST9Q06032 482 aa2.37□□□□□ -2.03
MSH3YCR092C GRE2Q12068 342 aaKnown RBP2.36□□□□□ -2.03
MSH3YCR092C YOL036WQ08206 761 aa2.36□□□□□ -2.03
MSH3YCR092C YNL035CP53962 389 aaKnown RBP2.36□□□□□ -2.03
MSH3YCR092C TRP5P00931 707 aaKnown RBP2.35□□□□□ -2.03
MSH3YCR092C RPS9BP05755 195 aaKnown RBP2.35□□□□□ -2.03
MSH3YCR092C VMA1P17255 1071 aaKnown RBP2.34□□□□□ -2.03
MSH3YCR092C STS1P38637 319 aa2.34□□□□□ -2.03
MSH3YCR092C SAM3Q08986 587 aa2.34□□□□□ -2.03
MSH3YCR092C YLR419WQ06698 1435 aaKnown RBP2.34□□□□□ -2.03
MSH3YCR092C SNF2P22082 1703 aa2.34□□□□□ -2.04
MSH3YCR092C RQC2Q12532 1038 aaKnown RBP2.33□□□□□ -2.04
MSH3YCR092C RAV1P47104 1357 aa2.33□□□□□ -2.04
MSH3YCR092C SEC61P32915 480 aa2.33□□□□□ -2.04
MSH3YCR092C IPL1P38991 367 aa2.33□□□□□ -2.04
MSH3YCR092C NPL4P33755 580 aa2.32□□□□□ -2.04
MSH3YCR092C RCR1P38212 213 aa2.32□□□□□ -2.04
MSH3YCR092C JIP4Q03361 876 aa2.32□□□□□ -2.04
MSH3YCR092C YDL129WQ07555 291 aa2.31□□□□□ -2.04
MSH3YCR092C GYP1Q08484 637 aa2.31□□□□□ -2.04
MSH3YCR092C ROM2P51862 1356 aaKnown RBP2.3□□□□□ -2.04
MSH3YCR092C DAN4P47179 1161 aa2.3□□□□□ -2.04
MSH3YCR092C URB1P34241 1764 aaKnown RBP2.3□□□□□ -2.04
MSH3YCR092C YEF3P16521 1044 aaKnown RBP2.3□□□□□ -2.04
MSH3YCR092C YMR074CQ04773 145 aa2.3□□□□□ -2.04
MSH3YCR092C PDR11P40550 1411 aa2.3□□□□□ -2.04
MSH3YCR092C APC1P53886 1748 aa2.3□□□□□ -2.04
MSH3YCR092C SPT7P35177 1332 aa2.29□□□□□ -2.04
MSH3YCR092C BCK2P33306 851 aa2.29□□□□□ -2.04
MSH3YCR092C IKI3Q06706 1349 aaKnown RBP2.29□□□□□ -2.04
MSH3YCR092C PAT1P25644 796 aaKnown RBP2.28□□□□□ -2.04
MSH3YCR092C FKS3Q04952 1785 aa2.28□□□□□ -2.04
MSH3YCR092C RTC1Q08281 1341 aa2.28□□□□□ -2.04
MSH3YCR092C YIL177CP40434 1758 aa2.28□□□□□ -2.05
MSH3YCR092C YJL225CP40889 1758 aa2.28□□□□□ -2.05
MSH3YCR092C PTC4P38089 393 aa2.27□□□□□ -2.05
MSH3YCR092C PTC2P39966 464 aaKnown RBP2.27□□□□□ -2.05
MSH3YCR092C IOC4Q04213 475 aa2.27□□□□□ -2.05
MSH3YCR092C SET1P38827 1080 aaKnown RBP2.27□□□□□ -2.05
MSH3YCR092C YEL023CP39992 682 aa2.27□□□□□ -2.05
MSH3YCR092C PRP43P53131 767 aaKnown RBP2.27□□□□□ -2.05
MSH3YCR092C PSK1P31374 1356 aa2.26□□□□□ -2.05
MSH3YCR092C ADE6P38972 1358 aaKnown RBP2.26□□□□□ -2.05
MSH3YCR092C GLN1P32288 370 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms