RNA–Protein interactions for RNA: YCR086W

CSM1, Transcript of Nucleolar protein that mediates homolog segregation during meiosis I, yeastyeast

Gene CSM1, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM1YCR086W YNR029CP53729 429 aaKnown RBP12.52□□□□□ -0.41
CSM1YCR086W SPE2P21182 396 aa12.5□□□□□ -0.41
CSM1YCR086W NAP1P25293 417 aaKnown RBP12.47□□□□□ -0.41
CSM1YCR086W YLR419WQ06698 1435 aaKnown RBP12.46□□□□□ -0.41
CSM1YCR086W RCM1P53972 490 aa12.43□□□□□ -0.42
CSM1YCR086W PPH3P32345 308 aa12.39□□□□□ -0.43
CSM1YCR086W CHZ1P40019 153 aaPredicted RBP12.39□□□□□ -0.43
CSM1YCR086W MRPL32P25348 183 aa12.38□□□□□ -0.43
CSM1YCR086W CPS1P27614 576 aa12.35□□□□□ -0.43
CSM1YCR086W MHP1P43638 1398 aa12.33□□□□□ -0.44
CSM1YCR086W PSK1P31374 1356 aa12.3□□□□□ -0.44
CSM1YCR086W PDS5Q04264 1277 aa12.29□□□□□ -0.44
CSM1YCR086W RTG3P38165 486 aa12.27□□□□□ -0.45
CSM1YCR086W SCT1P32784 759 aa12.26□□□□□ -0.45
CSM1YCR086W YML133CQ03099 1374 aa12.26□□□□□ -0.45
CSM1YCR086W YLL067CQ07888 1374 aa12.26□□□□□ -0.45
CSM1YCR086W YLL066CQ99208 1374 aa12.26□□□□□ -0.45
CSM1YCR086W PTP3P40048 928 aa12.24□□□□□ -0.45
CSM1YCR086W FKH1P40466 484 aa12.24□□□□□ -0.45
CSM1YCR086W YGL015CP33199 130 aa12.22□□□□□ -0.45
CSM1YCR086W LEU2P04173 364 aaPredicted RBP12.21□□□□□ -0.45
CSM1YCR086W PSD2P53037 1138 aaKnown RBP12.2□□□□□ -0.46
CSM1YCR086W NST1P53935 1240 aa12.2□□□□□ -0.46
CSM1YCR086W ADE6P38972 1358 aaKnown RBP12.18□□□□□ -0.46
CSM1YCR086W SPT7P35177 1332 aa12.18□□□□□ -0.46
CSM1YCR086W MLP1Q02455 1875 aaKnown RBP12.18□□□□□ -0.46
CSM1YCR086W LEU3P08638 886 aa12.17□□□□□ -0.46
CSM1YCR086W RPS24AP0CX31 135 aaKnown RBP12.16□□□□□ -0.46
CSM1YCR086W RPS24BP0CX32 135 aaKnown RBP12.16□□□□□ -0.46
CSM1YCR086W CSE4P36012 229 aa12.16□□□□□ -0.46
CSM1YCR086W MTR4P47047 1073 aaKnown RBP12.16□□□□□ -0.46
CSM1YCR086W TY4B-HP0C2J7 1802 aa12.14□□□□□ -0.47
CSM1YCR086W TY4B-JP47024 1803 aa12.14□□□□□ -0.47
CSM1YCR086W PRP45P28004 379 aaPredicted RBP12.13□□□□□ -0.47
CSM1YCR086W APP1P53933 587 aa12.13□□□□□ -0.47
CSM1YCR086W PRP43P53131 767 aaKnown RBP12.12□□□□□ -0.47
CSM1YCR086W SEC3P33332 1336 aaKnown RBP12.11□□□□□ -0.47
CSM1YCR086W REB1P21538 810 aa12.11□□□□□ -0.47
CSM1YCR086W PRP5P21372 849 aaPredicted RBP12.1□□□□□ -0.47
CSM1YCR086W YAH1Q12184 172 aaKnown RBP12.08□□□□□ -0.48
CSM1YCR086W ENT1Q12518 454 aa12.08□□□□□ -0.48
CSM1YCR086W RRP5Q05022 1729 aaKnown RBP12.08□□□□□ -0.48
CSM1YCR086W YEF3P16521 1044 aaKnown RBP12.07□□□□□ -0.48
CSM1YCR086W PDI1P17967 522 aaKnown RBP12.06□□□□□ -0.48
CSM1YCR086W HIM1Q06674 414 aa12.06□□□□□ -0.48
CSM1YCR086W GAS4Q08271 471 aa12.06□□□□□ -0.48
CSM1YCR086W AUS1Q08409 1394 aa12.05□□□□□ -0.48
CSM1YCR086W TRK1P12685 1235 aa12.04□□□□□ -0.48
CSM1YCR086W MSB3P48566 633 aaPredicted RBP12.04□□□□□ -0.48
CSM1YCR086W RTF1P53064 558 aa12.04□□□□□ -0.48
CSM1YCR086W DPS1P04802 557 aaKnown RBP12.03□□□□□ -0.48
CSM1YCR086W TAP42Q04372 366 aa12.03□□□□□ -0.48
CSM1YCR086W ENV9Q08651 330 aa12.03□□□□□ -0.48
CSM1YCR086W KAR2P16474 682 aaKnown RBP11.99□□□□□ -0.49
CSM1YCR086W SLM3Q12093 417 aa11.99□□□□□ -0.49
CSM1YCR086W DIP2Q12220 943 aaPredicted RBP11.99□□□□□ -0.49
CSM1YCR086W YIL177CP40434 1758 aa11.98□□□□□ -0.49
CSM1YCR086W YJL225CP40889 1758 aa11.98□□□□□ -0.49
CSM1YCR086W YRF1-2P40105 1681 aa11.98□□□□□ -0.49
CSM1YCR086W GRX4P32642 244 aa11.97□□□□□ -0.49
CSM1YCR086W TCB1Q12466 1186 aa11.95□□□□□ -0.5
CSM1YCR086W PAP2P53632 584 aaKnown RBP11.94□□□□□ -0.5
CSM1YCR086W ENP1P38333 483 aaKnown RBP11.92□□□□□ -0.5
CSM1YCR086W XKS1P42826 600 aa11.92□□□□□ -0.5
CSM1YCR086W IMH1Q06704 911 aaKnown RBP11.92□□□□□ -0.5
CSM1YCR086W YIL055CP40523 627 aaKnown RBP11.91□□□□□ -0.5
CSM1YCR086W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.91□□□□□ -0.5not detected
CSM1YCR086W RRP46P53256 223 aaPredicted RBP11.91□□□□□ -0.5
CSM1YCR086W NSR1P27476 414 aaKnown RBP RIP-Chip data11.89□□□□□ -0.51not detected
CSM1YCR086W IES2P40154 320 aa11.89□□□□□ -0.51
CSM1YCR086W URB1P34241 1764 aaKnown RBP11.89□□□□□ -0.51
CSM1YCR086W RSF2P46974 1380 aa11.89□□□□□ -0.51
CSM1YCR086W RPO41P13433 1351 aaKnown RBP11.88□□□□□ -0.51
CSM1YCR086W FKS3Q04952 1785 aa11.87□□□□□ -0.51
CSM1YCR086W APC1P53886 1748 aa11.85□□□□□ -0.51
CSM1YCR086W RCR1P38212 213 aa11.83□□□□□ -0.52
CSM1YCR086W RTR1P40084 226 aaPredicted RBP11.83□□□□□ -0.52
CSM1YCR086W DSD1P53095 428 aa11.82□□□□□ -0.52
CSM1YCR086W YRF1-3P0CX14 1859 aa11.81□□□□□ -0.52
CSM1YCR086W YRF1-7P0CX15 1859 aa11.81□□□□□ -0.52
CSM1YCR086W YRF1-6P53819 1859 aa11.81□□□□□ -0.52
CSM1YCR086W AKL1P38080 1108 aaKnown RBP11.81□□□□□ -0.52
CSM1YCR086W SNF2P22082 1703 aa11.8□□□□□ -0.52
CSM1YCR086W YKL133CP36066 463 aa11.8□□□□□ -0.52
CSM1YCR086W MPP10P47083 593 aaKnown RBP11.8□□□□□ -0.52
CSM1YCR086W IOC4Q04213 475 aa11.8□□□□□ -0.52
CSM1YCR086W YDL144CQ07589 356 aa11.8□□□□□ -0.52
CSM1YCR086W GLN1P32288 370 aaKnown RBP11.79□□□□□ -0.52
CSM1YCR086W DOT5P40553 215 aa11.79□□□□□ -0.52
CSM1YCR086W YRF1-4O13559 1382 aa11.78□□□□□ -0.52
CSM1YCR086W SIR4P11978 1358 aa11.78□□□□□ -0.52
CSM1YCR086W PRD1P25375 712 aa11.77□□□□□ -0.53
CSM1YCR086W HSP104P31539 908 aaKnown RBP11.77□□□□□ -0.53
CSM1YCR086W ADE16P54113 591 aaKnown RBP11.76□□□□□ -0.53
CSM1YCR086W FOX2Q02207 900 aaKnown RBP11.75□□□□□ -0.53
CSM1YCR086W FRK1Q03002 865 aaPredicted RBP11.75□□□□□ -0.53
CSM1YCR086W THI22Q06490 572 aa11.75□□□□□ -0.53
CSM1YCR086W PRS1P32895 427 aaKnown RBP11.74□□□□□ -0.53
CSM1YCR086W ROM2P51862 1356 aaKnown RBP11.74□□□□□ -0.53
CSM1YCR086W BUD31P25337 157 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms