RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeastyeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSM3YBR272C YGR130CP53278 816 aa8.53□□□□□ -1.04
HSM3YBR272C MAK10Q02197 733 aa8.52□□□□□ -1.05
HSM3YBR272C RPN1P38764 993 aaKnown RBP8.51□□□□□ -1.05
HSM3YBR272C ORC1P54784 914 aaPredicted RBP8.51□□□□□ -1.05
HSM3YBR272C FPR4Q06205 392 aaPredicted RBP8.5□□□□□ -1.05
HSM3YBR272C RPS0AP32905 252 aaKnown RBP8.48□□□□□ -1.05
HSM3YBR272C RNA1P11745 407 aaKnown RBP8.47□□□□□ -1.05
HSM3YBR272C FUN12P39730 1002 aaKnown RBP8.47□□□□□ -1.05
HSM3YBR272C HIF1Q12373 385 aa8.47□□□□□ -1.05
HSM3YBR272C TY3B-GQ99315 1547 aa8.47□□□□□ -1.05
HSM3YBR272C YKR023WP36119 530 aaKnown RBP8.46□□□□□ -1.05
HSM3YBR272C BNR1P40450 1375 aa8.46□□□□□ -1.05
HSM3YBR272C YAH1Q12184 172 aaKnown RBP8.45□□□□□ -1.06
HSM3YBR272C TIF4632P39936 914 aaKnown RBP8.44□□□□□ -1.06
HSM3YBR272C TOA1P32773 286 aa8.43□□□□□ -1.06
HSM3YBR272C YSP2Q06681 1438 aa8.42□□□□□ -1.06
HSM3YBR272C GIN4Q12263 1142 aa8.42□□□□□ -1.06
HSM3YBR272C PIL1P53252 339 aaKnown RBP8.41□□□□□ -1.06
HSM3YBR272C SAS10Q12136 610 aaPredicted RBP8.41□□□□□ -1.06
HSM3YBR272C SPC110P32380 944 aa8.4□□□□□ -1.06
HSM3YBR272C YNL011CP53980 444 aa8.4□□□□□ -1.06
HSM3YBR272C USO1P25386 1790 aa8.4□□□□□ -1.06
HSM3YBR272C SEC3P33332 1336 aaKnown RBP8.39□□□□□ -1.07
HSM3YBR272C TLG1Q03322 224 aa8.39□□□□□ -1.07
HSM3YBR272C CLC1P17891 233 aa8.38□□□□□ -1.07
HSM3YBR272C NMD2P38798 1089 aaKnown RBP8.38□□□□□ -1.07
HSM3YBR272C NHA1Q99271 985 aa8.38□□□□□ -1.07
HSM3YBR272C SEC7P11075 2009 aaKnown RBP8.38□□□□□ -1.07
HSM3YBR272C YLR271WQ06152 274 aa8.37□□□□□ -1.07
HSM3YBR272C THI12P42883 340 aa8.36□□□□□ -1.07
HSM3YBR272C THI5P43534 340 aa8.36□□□□□ -1.07
HSM3YBR272C THI11P47183 340 aa8.36□□□□□ -1.07
HSM3YBR272C SUB1P54000 292 aaKnown RBP8.36□□□□□ -1.07
HSM3YBR272C THI13Q07748 340 aa8.36□□□□□ -1.07
HSM3YBR272C YIL055CP40523 627 aaKnown RBP8.35□□□□□ -1.07
HSM3YBR272C VPS4P52917 437 aa8.35□□□□□ -1.07
HSM3YBR272C GRX3Q03835 250 aa8.35□□□□□ -1.07
HSM3YBR272C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
HSM3YBR272C SPT16P32558 1035 aaKnown RBP8.34□□□□□ -1.07
HSM3YBR272C CKB1P43639 278 aa8.34□□□□□ -1.07
HSM3YBR272C SSA1P10591 642 aaKnown RBP8.33□□□□□ -1.08
HSM3YBR272C SSA2P10592 639 aaKnown RBP8.33□□□□□ -1.08
HSM3YBR272C BRL1P38770 471 aa8.33□□□□□ -1.08
HSM3YBR272C YMR196WQ04336 1088 aa8.33□□□□□ -1.08
HSM3YBR272C CAT8P39113 1433 aa8.33□□□□□ -1.08
HSM3YBR272C SWE1P32944 819 aa8.32□□□□□ -1.08
HSM3YBR272C GLN1P32288 370 aaKnown RBP8.29□□□□□ -1.08
HSM3YBR272C HOP09932 586 aa8.28□□□□□ -1.08
HSM3YBR272C VPS72Q03388 795 aa8.28□□□□□ -1.08
HSM3YBR272C TFC8Q12308 588 aa8.28□□□□□ -1.08
HSM3YBR272C MPP10P47083 593 aaKnown RBP8.27□□□□□ -1.09
HSM3YBR272C YSH1Q06224 779 aaPredicted RBP8.27□□□□□ -1.09
HSM3YBR272C SIS1P25294 352 aaKnown RBP8.26□□□□□ -1.09
HSM3YBR272C RSM7P47150 247 aa8.25□□□□□ -1.09
HSM3YBR272C ETT1Q08421 412 aaKnown RBP8.25□□□□□ -1.09
HSM3YBR272C TY1B-NL2Q99337 1749 aaKnown RBP8.25□□□□□ -1.09
HSM3YBR272C YBT1P32386 1661 aa8.24□□□□□ -1.09
HSM3YBR272C NNF2P53253 936 aa8.24□□□□□ -1.09
HSM3YBR272C IME2P32581 645 aa8.23□□□□□ -1.09
HSM3YBR272C GEA1P47102 1408 aaPredicted RBP8.23□□□□□ -1.09
HSM3YBR272C IML1P47170 1584 aa8.23□□□□□ -1.09
HSM3YBR272C BRN1P38170 754 aa8.22□□□□□ -1.09
HSM3YBR272C IPL1P38991 367 aa8.22□□□□□ -1.09
HSM3YBR272C NST1P53935 1240 aa8.22□□□□□ -1.09
HSM3YBR272C DCD1P06773 312 aa8.21□□□□□ -1.09
HSM3YBR272C HAP1P0CE41 1502 aa8.21□□□□□ -1.09
HSM3YBR272C ASF1P32447 279 aa8.2□□□□□ -1.1
HSM3YBR272C MGA2P40578 1113 aa8.2□□□□□ -1.1
HSM3YBR272C MSH4P40965 878 aaPredicted RBP8.2□□□□□ -1.1
HSM3YBR272C NUP188P52593 1655 aaKnown RBP8.19□□□□□ -1.1
HSM3YBR272C CDC27P38042 758 aa8.19□□□□□ -1.1
HSM3YBR272C PET111P08468 800 aa8.18□□□□□ -1.1
HSM3YBR272C PEA2P40091 420 aa8.18□□□□□ -1.1
HSM3YBR272C CDC11P32458 415 aa8.17□□□□□ -1.1
HSM3YBR272C VMR1P38735 1592 aa8.16□□□□□ -1.1
HSM3YBR272C TYS1P36421 394 aaKnown RBP8.16□□□□□ -1.1
HSM3YBR272C TAN1P53072 289 aaPredicted RBP8.16□□□□□ -1.1
HSM3YBR272C APP1P53933 587 aa8.16□□□□□ -1.1
HSM3YBR272C HSC82P15108 705 aaKnown RBP8.15□□□□□ -1.1
HSM3YBR272C TPO2P53283 614 aa8.15□□□□□ -1.1
HSM3YBR272C DOS2P54858 310 aa8.15□□□□□ -1.1
HSM3YBR272C CST9Q06032 482 aa8.14□□□□□ -1.11
HSM3YBR272C APL5Q08951 932 aaKnown RBP8.14□□□□□ -1.11
HSM3YBR272C CBF5P33322 483 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
HSM3YBR272C LTV1P34078 463 aa8.13□□□□□ -1.11
HSM3YBR272C BYE1P36106 594 aa8.13□□□□□ -1.11
HSM3YBR272C RPN7Q06103 429 aaKnown RBP8.12□□□□□ -1.11
HSM3YBR272C MSH3P25336 1018 aa8.12□□□□□ -1.11
HSM3YBR272C SAP190P36123 1033 aa8.12□□□□□ -1.11
HSM3YBR272C ISW1P38144 1129 aa8.12□□□□□ -1.11
HSM3YBR272C SIC1P38634 284 aa8.12□□□□□ -1.11
HSM3YBR272C NAB3P38996 802 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
HSM3YBR272C HOS4P40480 1083 aa8.11□□□□□ -1.11
HSM3YBR272C PSD2P53037 1138 aaKnown RBP8.11□□□□□ -1.11
HSM3YBR272C ECM16Q04217 1267 aaKnown RBP8.11□□□□□ -1.11
HSM3YBR272C MCM1P11746 286 aa8.1□□□□□ -1.11
HSM3YBR272C RRP14P36080 434 aaKnown RBP8.1□□□□□ -1.11
HSM3YBR272C ATG36P46983 293 aa8.1□□□□□ -1.11
HSM3YBR272C PRP3Q03338 469 aaPredicted RBP8.1□□□□□ -1.11
HSM3YBR272C NOP8Q08287 484 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms