RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C REB1P21538 810 aa10.08□□□□□ -0.8
MSI1YBR195C TY3B-IQ7LHG5 1498 aaKnown RBP10.06□□□□□ -0.8
MSI1YBR195C PTP3P40048 928 aa10.05□□□□□ -0.8
MSI1YBR195C KIP3P53086 805 aaKnown RBP10.05□□□□□ -0.8
MSI1YBR195C RCM1P53972 490 aa10.04□□□□□ -0.8
MSI1YBR195C SPE2P21182 396 aa10.03□□□□□ -0.8
MSI1YBR195C YAH1Q12184 172 aaKnown RBP10.02□□□□□ -0.81
MSI1YBR195C CPS1P27614 576 aa10.01□□□□□ -0.81
MSI1YBR195C ORC1P54784 914 aaPredicted RBP10.01□□□□□ -0.81
MSI1YBR195C APP1P53933 587 aa10□□□□□ -0.81
MSI1YBR195C SCT1P32784 759 aa9.99□□□□□ -0.81
MSI1YBR195C TSR3Q12094 313 aaKnown RBP9.97□□□□□ -0.81
MSI1YBR195C PPH3P32345 308 aa9.96□□□□□ -0.82
MSI1YBR195C YLR419WQ06698 1435 aaKnown RBP9.94□□□□□ -0.82
MSI1YBR195C PRP45P28004 379 aaPredicted RBP9.93□□□□□ -0.82
MSI1YBR195C CHZ1P40019 153 aaPredicted RBP9.93□□□□□ -0.82
MSI1YBR195C ENT1Q12518 454 aa9.93□□□□□ -0.82
MSI1YBR195C PSK1P31374 1356 aa9.92□□□□□ -0.82
MSI1YBR195C YIL055CP40523 627 aaKnown RBP9.9□□□□□ -0.82
MSI1YBR195C ENV9Q08651 330 aa9.89□□□□□ -0.83
MSI1YBR195C PRP5P21372 849 aaPredicted RBP9.87□□□□□ -0.83
MSI1YBR195C ADE6P38972 1358 aaKnown RBP9.87□□□□□ -0.83
MSI1YBR195C LEU2P04173 364 aaPredicted RBP9.86□□□□□ -0.83
MSI1YBR195C POL5P39985 1022 aaKnown RBP9.86□□□□□ -0.83
MSI1YBR195C MTR4P47047 1073 aaKnown RBP9.86□□□□□ -0.83
MSI1YBR195C RRP5Q05022 1729 aaKnown RBP9.85□□□□□ -0.83
MSI1YBR195C CSE4P36012 229 aa9.84□□□□□ -0.83
MSI1YBR195C IMH1Q06704 911 aaKnown RBP9.84□□□□□ -0.83
MSI1YBR195C GLN1P32288 370 aaKnown RBP9.83□□□□□ -0.84
MSI1YBR195C RPS24AP0CX31 135 aaKnown RBP9.81□□□□□ -0.84
MSI1YBR195C RPS24BP0CX32 135 aaKnown RBP9.81□□□□□ -0.84
MSI1YBR195C SPT21P35209 758 aa9.81□□□□□ -0.84
MSI1YBR195C MSB3P48566 633 aaPredicted RBP9.8□□□□□ -0.84
MSI1YBR195C TY4B-HP0C2J7 1802 aa9.79□□□□□ -0.84
MSI1YBR195C TY4B-JP47024 1803 aa9.79□□□□□ -0.84
MSI1YBR195C LEU3P08638 886 aa9.79□□□□□ -0.84
MSI1YBR195C YRF1-2P40105 1681 aa9.79□□□□□ -0.84
MSI1YBR195C PRP43P53131 767 aaKnown RBP9.77□□□□□ -0.85
MSI1YBR195C TCB1Q12466 1186 aa9.77□□□□□ -0.85
MSI1YBR195C MHP1P43638 1398 aa9.76□□□□□ -0.85
MSI1YBR195C YML133CQ03099 1374 aa9.76□□□□□ -0.85
MSI1YBR195C YLL067CQ07888 1374 aa9.76□□□□□ -0.85
MSI1YBR195C YLL066CQ99208 1374 aa9.76□□□□□ -0.85
MSI1YBR195C FKH1P40466 484 aa9.76□□□□□ -0.85
MSI1YBR195C YMR074CQ04773 145 aa9.76□□□□□ -0.85
MSI1YBR195C RTF1P53064 558 aa9.75□□□□□ -0.85
MSI1YBR195C PDI1P17967 522 aaKnown RBP9.74□□□□□ -0.85
MSI1YBR195C RTG3P38165 486 aa9.74□□□□□ -0.85
MSI1YBR195C ENP1P38333 483 aaKnown RBP9.74□□□□□ -0.85
MSI1YBR195C SLM3Q12093 417 aa9.74□□□□□ -0.85
MSI1YBR195C IES2P40154 320 aa9.73□□□□□ -0.85
MSI1YBR195C PDS5Q04264 1277 aa9.73□□□□□ -0.85
MSI1YBR195C DPS1P04802 557 aaKnown RBP9.72□□□□□ -0.85
MSI1YBR195C YCK3P39962 524 aa9.72□□□□□ -0.85
MSI1YBR195C RSF2P46974 1380 aa9.72□□□□□ -0.85
MSI1YBR195C GAS4Q08271 471 aa9.71□□□□□ -0.86
MSI1YBR195C MRPL32P25348 183 aa9.7□□□□□ -0.86
MSI1YBR195C XKS1P42826 600 aa9.68□□□□□ -0.86
MSI1YBR195C ROM2P51862 1356 aaKnown RBP9.67□□□□□ -0.86
MSI1YBR195C GRX4P32642 244 aa9.67□□□□□ -0.86
MSI1YBR195C RIM101P33400 625 aa9.67□□□□□ -0.86
MSI1YBR195C HAA1Q12753 694 aaKnown RBP9.67□□□□□ -0.86
MSI1YBR195C UBP1P25037 809 aa9.66□□□□□ -0.86
MSI1YBR195C BUD31P25337 157 aaPredicted RBP9.66□□□□□ -0.86
MSI1YBR195C MLP1Q02455 1875 aaKnown RBP9.66□□□□□ -0.86
MSI1YBR195C TAP42Q04372 366 aa9.65□□□□□ -0.86
MSI1YBR195C KAR2P16474 682 aaKnown RBP9.64□□□□□ -0.87
MSI1YBR195C YKL133CP36066 463 aa9.64□□□□□ -0.87
MSI1YBR195C DOT5P40553 215 aa9.64□□□□□ -0.87
MSI1YBR195C YJL181WP46987 611 aa9.64□□□□□ -0.87
MSI1YBR195C YEF3P16521 1044 aaKnown RBP9.63□□□□□ -0.87
MSI1YBR195C RPN11P43588 306 aaKnown RBP9.63□□□□□ -0.87
MSI1YBR195C SEC3P33332 1336 aaKnown RBP9.62□□□□□ -0.87
MSI1YBR195C URB1P34241 1764 aaKnown RBP9.62□□□□□ -0.87
MSI1YBR195C FOX2Q02207 900 aaKnown RBP9.61□□□□□ -0.87
MSI1YBR195C HIM1Q06674 414 aa9.61□□□□□ -0.87
MSI1YBR195C LAM6Q08001 693 aa9.61□□□□□ -0.87
MSI1YBR195C AUS1Q08409 1394 aa9.61□□□□□ -0.87
MSI1YBR195C MEC3Q02574 474 aa9.6□□□□□ -0.87
MSI1YBR195C EDE1P34216 1381 aa9.6□□□□□ -0.87
MSI1YBR195C PRP40P33203 583 aaKnown RBP9.59□□□□□ -0.87
MSI1YBR195C FKS3Q04952 1785 aa9.58□□□□□ -0.88
MSI1YBR195C COBP00163 385 aa9.58□□□□□ -0.88
MSI1YBR195C PAP2P53632 584 aaKnown RBP9.58□□□□□ -0.88
MSI1YBR195C APC1P53886 1748 aa9.58□□□□□ -0.88
MSI1YBR195C YRF1-4O13559 1382 aa9.58□□□□□ -0.88
MSI1YBR195C RCR1P38212 213 aa9.57□□□□□ -0.88
MSI1YBR195C SIR4P11978 1358 aa9.57□□□□□ -0.88
MSI1YBR195C YIL177CP40434 1758 aa9.57□□□□□ -0.88
MSI1YBR195C YJL225CP40889 1758 aa9.57□□□□□ -0.88
MSI1YBR195C FRK1Q03002 865 aaPredicted RBP9.56□□□□□ -0.88
MSI1YBR195C RPO41P13433 1351 aaKnown RBP9.55□□□□□ -0.88
MSI1YBR195C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
MSI1YBR195C PSD2P53037 1138 aaKnown RBP9.54□□□□□ -0.88
MSI1YBR195C NST1P53935 1240 aa9.54□□□□□ -0.88
MSI1YBR195C ATG13Q06628 738 aa9.53□□□□□ -0.88
MSI1YBR195C TRK1P12685 1235 aa9.52□□□□□ -0.89
MSI1YBR195C NPR2P39923 615 aa9.52□□□□□ -0.89
MSI1YBR195C ADE16P54113 591 aaKnown RBP9.52□□□□□ -0.89
MSI1YBR195C YKR075CP36155 307 aa9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms