RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene UBC4, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC4YBR082C PRI1P10363 409 aa7.15□□□□□ -1.26
UBC4YBR082C RCM1P53972 490 aa7.14□□□□□ -1.27
UBC4YBR082C MLP1Q02455 1875 aaKnown RBP7.14□□□□□ -1.27
UBC4YBR082C LEU3P08638 886 aa7.13□□□□□ -1.27
UBC4YBR082C PSD2P53037 1138 aaKnown RBP7.13□□□□□ -1.27
UBC4YBR082C THI12P42883 340 aa7.12□□□□□ -1.27
UBC4YBR082C THI5P43534 340 aa7.12□□□□□ -1.27
UBC4YBR082C THI11P47183 340 aa7.12□□□□□ -1.27
UBC4YBR082C THI13Q07748 340 aa7.12□□□□□ -1.27
UBC4YBR082C PSK1P31374 1356 aa7.11□□□□□ -1.27
UBC4YBR082C PPH3P32345 308 aa7.11□□□□□ -1.27
UBC4YBR082C RTG3P38165 486 aa7.11□□□□□ -1.27
UBC4YBR082C CPS1P27614 576 aa7.1□□□□□ -1.27
UBC4YBR082C ENP1P38333 483 aaKnown RBP7.1□□□□□ -1.27
UBC4YBR082C FKH1P40466 484 aa7.1□□□□□ -1.27
UBC4YBR082C HAA1Q12753 694 aaKnown RBP7.1□□□□□ -1.27
UBC4YBR082C LEU2P04173 364 aaPredicted RBP7.06□□□□□ -1.28
UBC4YBR082C YML133CQ03099 1374 aa7.06□□□□□ -1.28
UBC4YBR082C YLL067CQ07888 1374 aa7.06□□□□□ -1.28
UBC4YBR082C YLL066CQ99208 1374 aa7.06□□□□□ -1.28
UBC4YBR082C NSR1P27476 414 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
UBC4YBR082C YFR006WP43590 535 aa7.05□□□□□ -1.28
UBC4YBR082C NST1P53935 1240 aa7.05□□□□□ -1.28
UBC4YBR082C MTR4P47047 1073 aaKnown RBP7.04□□□□□ -1.28
UBC4YBR082C PDI1P17967 522 aaKnown RBP7.02□□□□□ -1.29
UBC4YBR082C CSE4P36012 229 aa7.02□□□□□ -1.29
UBC4YBR082C RTF1P53064 558 aa7.02□□□□□ -1.29
UBC4YBR082C TY4B-HP0C2J7 1802 aa7.01□□□□□ -1.29
UBC4YBR082C TY4B-JP47024 1803 aa7.01□□□□□ -1.29
UBC4YBR082C ADE6P38972 1358 aaKnown RBP7□□□□□ -1.29
UBC4YBR082C RPS24AP0CX31 135 aaKnown RBP7□□□□□ -1.29
UBC4YBR082C RPS24BP0CX32 135 aaKnown RBP7□□□□□ -1.29
UBC4YBR082C KAR2P16474 682 aaKnown RBP7□□□□□ -1.29
UBC4YBR082C TAP42Q04372 366 aa6.99□□□□□ -1.29
UBC4YBR082C TRK1P12685 1235 aa6.98□□□□□ -1.29
UBC4YBR082C YEF3P16521 1044 aaKnown RBP6.98□□□□□ -1.29
UBC4YBR082C PRP43P53131 767 aaKnown RBP6.98□□□□□ -1.29
UBC4YBR082C GRX4P32642 244 aa6.97□□□□□ -1.29
UBC4YBR082C GAS4Q08271 471 aa6.97□□□□□ -1.29
UBC4YBR082C PAP2P53632 584 aaKnown RBP6.96□□□□□ -1.3
UBC4YBR082C HIM1Q06674 414 aa6.96□□□□□ -1.3
UBC4YBR082C DPS1P04802 557 aaKnown RBP6.95□□□□□ -1.3
UBC4YBR082C PRP45P28004 379 aaPredicted RBP6.95□□□□□ -1.3
UBC4YBR082C PTP3P40048 928 aa6.95□□□□□ -1.3
UBC4YBR082C SNF2P22082 1703 aa6.95□□□□□ -1.3
UBC4YBR082C RRP5Q05022 1729 aaKnown RBP6.95□□□□□ -1.3
UBC4YBR082C AUS1Q08409 1394 aa6.95□□□□□ -1.3
UBC4YBR082C PRP5P21372 849 aaPredicted RBP6.93□□□□□ -1.3
UBC4YBR082C PRS1P32895 427 aaKnown RBP6.93□□□□□ -1.3
UBC4YBR082C IOC4Q04213 475 aa6.93□□□□□ -1.3
UBC4YBR082C RPP0P05317 312 aaKnown RBP6.91□□□□□ -1.3
UBC4YBR082C YDL144CQ07589 356 aa6.91□□□□□ -1.3
UBC4YBR082C RPO41P13433 1351 aaKnown RBP6.91□□□□□ -1.3
UBC4YBR082C YRF1-2P40105 1681 aa6.9□□□□□ -1.3
UBC4YBR082C YIL177CP40434 1758 aa6.9□□□□□ -1.3
UBC4YBR082C YJL225CP40889 1758 aa6.9□□□□□ -1.3
UBC4YBR082C RTR1P40084 226 aaPredicted RBP6.9□□□□□ -1.3
UBC4YBR082C VPS27P40343 622 aaKnown RBP6.89□□□□□ -1.31
UBC4YBR082C MPP10P47083 593 aaKnown RBP6.89□□□□□ -1.31
UBC4YBR082C MSB3P48566 633 aaPredicted RBP6.89□□□□□ -1.31
UBC4YBR082C SLM3Q12093 417 aa6.89□□□□□ -1.31
UBC4YBR082C FKS3Q04952 1785 aa6.89□□□□□ -1.31
UBC4YBR082C URB1P34241 1764 aaKnown RBP6.88□□□□□ -1.31
UBC4YBR082C REB1P21538 810 aa6.88□□□□□ -1.31
UBC4YBR082C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
UBC4YBR082C RRP46P53256 223 aaPredicted RBP6.88□□□□□ -1.31
UBC4YBR082C CDC45Q08032 650 aa6.88□□□□□ -1.31
UBC4YBR082C TCB1Q12466 1186 aa6.88□□□□□ -1.31
UBC4YBR082C ENT1Q12518 454 aa6.88□□□□□ -1.31
UBC4YBR082C PRD1P25375 712 aa6.86□□□□□ -1.31
UBC4YBR082C YAH1Q12184 172 aaKnown RBP6.86□□□□□ -1.31
UBC4YBR082C APC1P53886 1748 aa6.85□□□□□ -1.31
UBC4YBR082C AKL1P38080 1108 aaKnown RBP6.85□□□□□ -1.31
UBC4YBR082C XKS1P42826 600 aa6.85□□□□□ -1.31
UBC4YBR082C APP1P53933 587 aa6.85□□□□□ -1.31
UBC4YBR082C DSD1P53095 428 aa6.84□□□□□ -1.31
UBC4YBR082C ENV9Q08651 330 aa6.84□□□□□ -1.31
UBC4YBR082C RSF2P46974 1380 aa6.83□□□□□ -1.32
UBC4YBR082C SUI2P20459 304 aaKnown RBP6.83□□□□□ -1.32
UBC4YBR082C HSP104P31539 908 aaKnown RBP6.83□□□□□ -1.32
UBC4YBR082C RVB2Q12464 471 aaKnown RBP6.83□□□□□ -1.32
UBC4YBR082C TPD3P31383 635 aa6.82□□□□□ -1.32
UBC4YBR082C SAP155P43612 1002 aa6.82□□□□□ -1.32
UBC4YBR082C THI22Q06490 572 aa6.82□□□□□ -1.32
UBC4YBR082C RCR1P38212 213 aa6.81□□□□□ -1.32
UBC4YBR082C IES2P40154 320 aa6.81□□□□□ -1.32
UBC4YBR082C YRB30P53107 440 aaPredicted RBP6.81□□□□□ -1.32
UBC4YBR082C IMH1Q06704 911 aaKnown RBP6.81□□□□□ -1.32
UBC4YBR082C YRF1-4O13559 1382 aa6.81□□□□□ -1.32
UBC4YBR082C SIR4P11978 1358 aa6.8□□□□□ -1.32
UBC4YBR082C NTH2P35172 780 aa6.79□□□□□ -1.32
UBC4YBR082C FUN12P39730 1002 aaKnown RBP6.79□□□□□ -1.32
UBC4YBR082C YNL050CP53952 270 aa6.79□□□□□ -1.32
UBC4YBR082C CTF4Q01454 927 aa6.79□□□□□ -1.32
UBC4YBR082C AOS1Q06624 347 aa6.79□□□□□ -1.32
UBC4YBR082C RTT109Q07794 436 aa6.79□□□□□ -1.32
UBC4YBR082C HEF3P53978 1044 aaKnown RBP6.78□□□□□ -1.32
UBC4YBR082C MEC3Q02574 474 aa6.78□□□□□ -1.32
UBC4YBR082C YKL133CP36066 463 aa6.77□□□□□ -1.33
UBC4YBR082C ZDS1P50111 915 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms