RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
SPIN3-239ENST00000640463 ABCC5O15440 1437 aa19.41■□□□□ 0.7
SPIN3-239ENST00000640463 NUP153P49790 1475 aaKnown RBP19.4■□□□□ 0.7
SPIN3-239ENST00000640463 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
SPIN3-239ENST00000640463 KIAA0556O60303 1618 aa19.39■□□□□ 0.7
SPIN3-239ENST00000640463 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
SPIN3-239ENST00000640463 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
SPIN3-239ENST00000640463 ANKRD30BQ9BXX2 1392 aa19.38■□□□□ 0.69
SPIN3-239ENST00000640463 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
SPIN3-239ENST00000640463 ZNF777Q9ULD5 760 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-239ENST00000640463 PRG4Q92954 1404 aaPredicted RBP19.35■□□□□ 0.69
SPIN3-239ENST00000640463 DNMT1P26358 1616 aaKnown RBP19.35■□□□□ 0.69
SPIN3-239ENST00000640463 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
SPIN3-239ENST00000640463 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
SPIN3-239ENST00000640463 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-239ENST00000640463 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
SPIN3-239ENST00000640463 FBLN2P98095 1184 aa19.34■□□□□ 0.69
SPIN3-239ENST00000640463 CCDC7Q96M83 1385 aa19.33■□□□□ 0.69
SPIN3-239ENST00000640463 GRIN2AQ12879 1464 aa19.33■□□□□ 0.69
SPIN3-239ENST00000640463 RPRD2Q5VT52 1461 aaKnown RBP19.33■□□□□ 0.69
SPIN3-239ENST00000640463 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
SPIN3-239ENST00000640463 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
SPIN3-239ENST00000640463 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
SPIN3-239ENST00000640463 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
SPIN3-239ENST00000640463 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
SPIN3-239ENST00000640463 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
SPIN3-239ENST00000640463 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
SPIN3-239ENST00000640463 PLB1Q6P1J6 1458 aa19.29■□□□□ 0.68
SPIN3-239ENST00000640463 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
SPIN3-239ENST00000640463 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
SPIN3-239ENST00000640463 RBM19Q9Y4C8 960 aaKnown RBP19.28■□□□□ 0.68
SPIN3-239ENST00000640463 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
SPIN3-239ENST00000640463 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
SPIN3-239ENST00000640463 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.67
SPIN3-239ENST00000640463 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
SPIN3-239ENST00000640463 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
SPIN3-239ENST00000640463 PZPP20742 1482 aa19.24■□□□□ 0.67
SPIN3-239ENST00000640463 KIF14Q15058 1648 aa19.24■□□□□ 0.67
SPIN3-239ENST00000640463 GPATCH8Q9UKJ3 1502 aaKnown RBP19.23■□□□□ 0.67
SPIN3-239ENST00000640463 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
SPIN3-239ENST00000640463 ANP32EQ9BTT0 268 aa19.22■□□□□ 0.67
SPIN3-239ENST00000640463 PKD2Q13563 968 aa19.21■□□□□ 0.67
SPIN3-239ENST00000640463 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
SPIN3-239ENST00000640463 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
SPIN3-239ENST00000640463 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
SPIN3-239ENST00000640463 ITSN2Q9NZM3 1697 aa19.16■□□□□ 0.66
SPIN3-239ENST00000640463 KIAA1107Q9UPP5 1409 aa19.15■□□□□ 0.66
SPIN3-239ENST00000640463 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
SPIN3-239ENST00000640463 SYNJ2O15056 1496 aa19.14■□□□□ 0.66
SPIN3-239ENST00000640463 MAGI1Q96QZ7 1491 aaPredicted RBP19.14■□□□□ 0.66
SPIN3-239ENST00000640463 SENP3-EIF4A1A0A087X0R7 540 aa19.14■□□□□ 0.65
SPIN3-239ENST00000640463 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
SPIN3-239ENST00000640463 USP47Q96K76 1375 aa19.12■□□□□ 0.65
SPIN3-239ENST00000640463 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
SPIN3-239ENST00000640463 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
SPIN3-239ENST00000640463 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
SPIN3-239ENST00000640463 POLR1AO95602 1720 aaPredicted RBP19.11■□□□□ 0.65
SPIN3-239ENST00000640463 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
SPIN3-239ENST00000640463 BCORL1Q5H9F3 1711 aa19.1■□□□□ 0.65
SPIN3-239ENST00000640463 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
SPIN3-239ENST00000640463 NUP155O75694 1391 aa19.1■□□□□ 0.65
SPIN3-239ENST00000640463 ADGRL2O95490 1459 aa19.1■□□□□ 0.65
SPIN3-239ENST00000640463 MBD5Q9P267 1494 aa19.1■□□□□ 0.65
SPIN3-239ENST00000640463 ADCY10Q96PN6 1610 aa19.09■□□□□ 0.65
SPIN3-239ENST00000640463 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
SPIN3-239ENST00000640463 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.64
SPIN3-239ENST00000640463 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
SPIN3-239ENST00000640463 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
SPIN3-239ENST00000640463 B4GALNT3Q6L9W6 998 aa19.06■□□□□ 0.64
SPIN3-239ENST00000640463 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
SPIN3-239ENST00000640463 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
SPIN3-239ENST00000640463 ATP10BO94823 1461 aa19.05■□□□□ 0.64
SPIN3-239ENST00000640463 NUP160Q12769 1436 aa19.05■□□□□ 0.64
SPIN3-239ENST00000640463 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
SPIN3-239ENST00000640463 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
SPIN3-239ENST00000640463 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
SPIN3-239ENST00000640463 MSH5O43196 834 aa19.03■□□□□ 0.64
SPIN3-239ENST00000640463 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.64
SPIN3-239ENST00000640463 KDM5CP41229 1560 aa19.02■□□□□ 0.64
SPIN3-239ENST00000640463 ABCA8O94911 1581 aa19■□□□□ 0.63
SPIN3-239ENST00000640463 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
SPIN3-239ENST00000640463 ERICH6BQ5W0A0 696 aa18.99■□□□□ 0.63
SPIN3-239ENST00000640463 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
SPIN3-239ENST00000640463 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
SPIN3-239ENST00000640463 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
SPIN3-239ENST00000640463 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
SPIN3-239ENST00000640463 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
SPIN3-239ENST00000640463 TMC1Q8TDI8 760 aa18.94■□□□□ 0.62
SPIN3-239ENST00000640463 PNISRQ8TF01 805 aaKnown RBP18.92■□□□□ 0.62
SPIN3-239ENST00000640463 ARID4BQ4LE39 1312 aaPredicted RBP18.92■□□□□ 0.62
SPIN3-239ENST00000640463 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
SPIN3-239ENST00000640463 PTPRGP23470 1445 aa18.91■□□□□ 0.62
SPIN3-239ENST00000640463 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
SPIN3-239ENST00000640463 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
SPIN3-239ENST00000640463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
SPIN3-239ENST00000640463 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.61
SPIN3-239ENST00000640463 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
SPIN3-239ENST00000640463 ARHGEF12Q9NZN5 1544 aa18.88■□□□□ 0.61
SPIN3-239ENST00000640463 KDM5DQ9BY66 1539 aa18.88■□□□□ 0.61
SPIN3-239ENST00000640463 SAMD9LQ8IVG5 1584 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms