RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 ABCC5O15440 1437 aa12.7□□□□□ -0.38
RTTN-216ENST00000640376 PRG4Q92954 1404 aaPredicted RBP12.7□□□□□ -0.38
RTTN-216ENST00000640376 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
RTTN-216ENST00000640376 ADCY10Q96PN6 1610 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
RTTN-216ENST00000640376 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 FOXD1Q16676 465 aa12.68□□□□□ -0.38
RTTN-216ENST00000640376 ANP32CO43423 234 aa12.67□□□□□ -0.38
RTTN-216ENST00000640376 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
RTTN-216ENST00000640376 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
RTTN-216ENST00000640376 NUP160Q12769 1436 aa12.66□□□□□ -0.38
RTTN-216ENST00000640376 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
RTTN-216ENST00000640376 GPATCH8Q9UKJ3 1502 aaKnown RBP12.63□□□□□ -0.39
RTTN-216ENST00000640376 CDC42BPAQ5VT25 1732 aa12.63□□□□□ -0.39
RTTN-216ENST00000640376 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
RTTN-216ENST00000640376 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
RTTN-216ENST00000640376 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
RTTN-216ENST00000640376 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
RTTN-216ENST00000640376 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
RTTN-216ENST00000640376 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
RTTN-216ENST00000640376 ABCA8O94911 1581 aa12.61□□□□□ -0.39
RTTN-216ENST00000640376 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
RTTN-216ENST00000640376 TEX14Q8IWB6 1497 aa12.61□□□□□ -0.39
RTTN-216ENST00000640376 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
RTTN-216ENST00000640376 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
RTTN-216ENST00000640376 PZPP20742 1482 aa12.59□□□□□ -0.39
RTTN-216ENST00000640376 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
RTTN-216ENST00000640376 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
RTTN-216ENST00000640376 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
RTTN-216ENST00000640376 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
RTTN-216ENST00000640376 ATP10BO94823 1461 aa12.56□□□□□ -0.4
RTTN-216ENST00000640376 CHD1O14646 1710 aa12.55□□□□□ -0.4
RTTN-216ENST00000640376 ABCC10Q5T3U5 1492 aa12.55□□□□□ -0.4
RTTN-216ENST00000640376 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
RTTN-216ENST00000640376 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
RTTN-216ENST00000640376 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
RTTN-216ENST00000640376 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
RTTN-216ENST00000640376 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
RTTN-216ENST00000640376 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
RTTN-216ENST00000640376 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
RTTN-216ENST00000640376 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
RTTN-216ENST00000640376 C9orf84Q5VXU9 1444 aa12.51□□□□□ -0.41
RTTN-216ENST00000640376 BCANQ96GW7 911 aa12.51□□□□□ -0.41
RTTN-216ENST00000640376 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
RTTN-216ENST00000640376 C11orf95C9JLR9 678 aaPredicted RBP12.5□□□□□ -0.41
RTTN-216ENST00000640376 FKBP8Q14318 412 aa12.5□□□□□ -0.41
RTTN-216ENST00000640376 CDC42BPBQ9Y5S2 1711 aa12.49□□□□□ -0.41
RTTN-216ENST00000640376 MBD5Q9P267 1494 aa12.49□□□□□ -0.41
RTTN-216ENST00000640376 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
RTTN-216ENST00000640376 PTPRGP23470 1445 aa12.49□□□□□ -0.41
RTTN-216ENST00000640376 PKD2Q13563 968 aa12.48□□□□□ -0.41
RTTN-216ENST00000640376 SAMD9LQ8IVG5 1584 aa12.47□□□□□ -0.41
RTTN-216ENST00000640376 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
RTTN-216ENST00000640376 SPATA31E1Q6ZUB1 1445 aa12.47□□□□□ -0.41
RTTN-216ENST00000640376 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
RTTN-216ENST00000640376 NEFLP07196 543 aa12.46□□□□□ -0.42
RTTN-216ENST00000640376 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.42
RTTN-216ENST00000640376 NUP155O75694 1391 aa12.45□□□□□ -0.42
RTTN-216ENST00000640376 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
RTTN-216ENST00000640376 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
RTTN-216ENST00000640376 KIF15Q9NS87 1388 aa12.45□□□□□ -0.42
RTTN-216ENST00000640376 SHROOM2Q13796 1616 aa12.44□□□□□ -0.42
RTTN-216ENST00000640376 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.42
RTTN-216ENST00000640376 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
RTTN-216ENST00000640376 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
RTTN-216ENST00000640376 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
RTTN-216ENST00000640376 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
RTTN-216ENST00000640376 CCDC141Q6ZP82 1450 aa12.43□□□□□ -0.42
RTTN-216ENST00000640376 KDM5CP41229 1560 aa12.43□□□□□ -0.42
RTTN-216ENST00000640376 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
RTTN-216ENST00000640376 USP47Q96K76 1375 aa12.42□□□□□ -0.42
RTTN-216ENST00000640376 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
RTTN-216ENST00000640376 ERCC6L2Q5T890 1561 aa12.42□□□□□ -0.42
RTTN-216ENST00000640376 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
RTTN-216ENST00000640376 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
RTTN-216ENST00000640376 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
RTTN-216ENST00000640376 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
RTTN-216ENST00000640376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.43
RTTN-216ENST00000640376 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
RTTN-216ENST00000640376 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
RTTN-216ENST00000640376 POLR3GLQ9BT43 218 aa12.39□□□□□ -0.43
RTTN-216ENST00000640376 FAM135AQ9P2D6 1515 aa12.38□□□□□ -0.43
RTTN-216ENST00000640376 ABCC2Q92887 1545 aa12.38□□□□□ -0.43
RTTN-216ENST00000640376 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
RTTN-216ENST00000640376 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
RTTN-216ENST00000640376 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
RTTN-216ENST00000640376 MAST1Q9Y2H9 1570 aa12.36□□□□□ -0.43
RTTN-216ENST00000640376 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
RTTN-216ENST00000640376 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
RTTN-216ENST00000640376 UNC13BO14795 1591 aa12.35□□□□□ -0.43
RTTN-216ENST00000640376 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
RTTN-216ENST00000640376 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
RTTN-216ENST00000640376 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
RTTN-216ENST00000640376 DHX29Q7Z478 1369 aaKnown RBP12.33□□□□□ -0.43
RTTN-216ENST00000640376 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
RTTN-216ENST00000640376 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
RTTN-216ENST00000640376 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms